Entry |
|
Symbol |
REXO1
|
Name |
(RefSeq) RNA exonuclease 1 homolog
|
KO |
K14570 | RNA exonuclease [EC:3.1.-.-] |
|
Organism |
apri Ahaetulla prasina (Asian vine snake)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:apri00001]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
131188246 (REXO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:apri03009]
131188246 (REXO1)
Ribosome biogenesis [BR:apri03009]
Eukaryotic type
Pre-60S particles
RNases
131188246 (REXO1)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
1:362393831..362439397
|
AA seq |
1229 aa
MLCSSGFFRGFECPYGQACGRPYCHFRHPPGAQHTTDGPIPPRRLLALSGPSRRPATVGG
CGYDPYNPELPKPVAQDSNGTLENMVSSASGILELELFDKAIEAAKNEVEREQKKYEELL
GTTKEYGSSEPPLLPSKAAGLATSNPFSSLEYSPGSYNANSSNDYNPTPLAVAASSQSSK
YTLDSFNNTKCKGSSLEYVPTVVTQPKKYSSPVGNSKYIIDNSKPSTDLEYDPLSNYSAR
LLSKAKEQKGAKRKREVDHEEAYSPSFKKYCDETSNDEPIARFSDSEDERHETSTIPLKS
KGGSESKLGAAKEKGAPQIDTSSRQMKETAVQYDMGDIEGPQRTSVKDVVEKNAKLVKVP
SNRDVKAKEKNKVASKDKLKKKKEDDHKAQGKKNQGKIGDKEKMDVKAQHKNGERSKEKP
SKSHVDRHALKLSKPKSVITGIKEENSGKNKDVGKAAATEKLGTSRKGSKFQPVELKRKP
QIPSGTEHNKRKDKQPALKRSKEALTNSQAKENSGAKHKLKQRSLSHVDLFGDESGEEEQ
VAQPLLPFPDVSSDSDRDDADFSLPYDYGMANVKKLKLSQAPAASSSSSSDDEINYSGLE
KDLDFESDPMEECLRIFNESTDVKTEDKGRLGKQVSKEEEGEEKLTEDSLTTLFPGQKRR
ISHVTKQGHVEVPSKPVIRPYRPPTAQEVCYQRIQLAQKQAAHLAQQRPQQPLPTAKFPV
APQRTFITMHKGERKRVAHVPSAALSAVSKLVPGNLKKTIPPARVASSNGVDAPALKART
LTGMASKTTTTGVPKRIAHTPTLQSTTLKRPVIPTEYGAKVPTNIRQRYLNLFIDECLKF
CPSQQEAFDKALAEEKVVYERSTSRNIYLNVAVNTLKKLRTLLPSPSQGVQKAINRKVVS
HEAMLGGKLAARTSYTLNRSTSLRLEDLTGATLYRRLKEYVLTEDDLKEHGYPLPCPERP
GRAIVFAAEEKKMTDGSCRICCRCGTEYMVSPSGNCVRKEECIHHWGRLRKQRVPGGWET
HYSCCSGAVGSLGCQVAKQHVHDGRKESLEGFVKTFEKLTRADGHPGIYALDCEMCYTKQ
GLELTRVTVINSDLRVVYDTFVKPDSKVVDYNTRFSGVTEADLENASITLRDVQAVLLSM
FSTDTILIGHSLESDLFALKLIHSMVVDTAVVFPHRLGLPYKRALRTLMADYLKRIIQDS
VEGHDSSEDARACMELMIWKIKEDAKVKR |
NT seq |
3690 nt +upstreamnt +downstreamnt
atgctctgctcgagcggcttcttccgcggcttcgaatgtccctacgggcaggcctgcggg
aggccctactgccacttcagacacccgcccggggcccaacacaccaccgatggccctata
ccgcctcgacgccttttggccctgtctggtcccagcagacgccccgccacagtcggaggg
tgtggttatgacccctacaacccagaacttcccaaacctgtggcacaagacagcaatggc
actttggaaaatatggtctcgtcagcttctggaattctggagctggagctgtttgacaag
gcaattgaagctgccaagaatgaagttgaacgtgagcaaaagaagtatgaagagctcctg
gggacaacaaaagagtatggctcctctgaacctcctttgcttccttctaaggctgctgga
ttagcaacatccaacccattcagttctctggagtatagcccaggtagttacaatgcaaac
agtagcaatgactacaaccctactcctcttgcagtggctgcttctagtcagtctagcaaa
tatactttggactccttcaacaatacgaaatgcaagggcagctcactggaatacgttccc
actgtggtcactcagccgaagaagtacagcagccctgttggaaatagcaaatacataatt
gacaactccaagccttcaacagatttagaatatgatcctctttcaaattattctgccagg
ctgttgagcaaagctaaagaacagaagggggccaagcggaagagagaagttgatcacgag
gaggcatattctccttcattcaagaaatattgtgacgaaactagcaacgatgagcccatc
gcccggttctctgactcggaggatgaacgccacgaaacttctaccatcccccttaaatct
aaaggaggttcagaaagcaaattgggtgcagccaaagaaaagggagccccacaaatagat
actagttctcgacaaatgaaagagactgccgtgcagtatgacatgggagacatcgagggc
cctcagagaacttctgtcaaagatgtagtggagaaaaatgccaagttggtcaaagtgcct
tctaaccgagatgtgaaagcaaaggaaaagaacaaagtggcgtcaaaggataagttgaaa
aagaaaaaggaggatgaccacaaggcgcagggtaagaaaaatcaaggtaaaataggagac
aaggagaagatggacgtgaaggcacagcacaaaaatggggaacggagtaaagagaagcca
agcaagtcccacgttgacaggcatgcactaaagctcagtaagccaaaatctgtgattact
ggaattaaggaggagaactctggcaagaacaaagatgttggcaaagctgctgctactgaa
aaattagggacaagtcgaaaaggtagcaagttccagccagtagagttgaaaaggaagccc
caaatccctagtggaactgaacacaataagagaaaagacaagcaaccagccttgaaaagg
tctaaggaagcattgaccaactcccaggccaaggagaattcgggggccaagcacaagctt
aaacagcggtccctgagccatgttgatctctttggtgatgagagtggagaggaggagcag
gtggcccagcctcttcttccgttccctgatgtgagttcagactcagaccgagatgatgct
gacttctctttgccctatgactatgggatggcaaatgttaagaaacttaagttatcccag
gctcctgctgcttcctcatcctcctcctctgatgatgagattaattattctggcctagag
aaggatttggattttgagtctgacccaatggaggagtgccttcggatttttaatgaatcc
actgatgtcaaaacagaagacaaaggccgactaggaaaacaggtatcaaaagaggaagag
ggtgaagaaaagttgacagaggacagtttaaccacactttttcctggacaaaaaaggagg
atttctcatgtaacaaagcaaggacatgttgaagtcccaagcaagccagtgatccggcct
taccggcccccaaccgcccaagaggtctgttaccagaggattcagctagcgcagaagcag
gcagcgcacctggcccagcagcggccacagcagcccctgccgaccgcaaagtttcctgtg
gcaccccaaagaaccttcattactatgcacaaaggagaaaggaagcgagttgctcatgta
cccagtgcagctctttcagcagtctccaagttggttcctggaaatcttaagaagaccatt
ccacctgcacgtgtggcatcttccaatggtgttgatgctccagcattgaaagctcgaacg
ctgactgggatggcatctaaaacaactaccacaggtgtcccaaaaaggatagcacatact
cccactctgcagagcaccaccttgaaaaggccagttattcccacagaatacggtgccaaa
gttcccaccaacatccgtcagaggtacctcaacctcttcattgatgagtgcttgaagttc
tgcccctcgcagcaagaagcatttgacaaggctcttgctgaggagaaggtggtgtatgag
cgcagcaccagccgcaacatctacctgaatgtggcagtaaacactttgaagaagctgagg
actctgttgcccagcccttctcagggagttcagaaggccatcaacaggaaagtggtttct
catgaagctatgctaggagggaaactggcagccaggaccagttatacacttaatcgttct
acaagcttacggctagaagacttgacaggggctaccttgtaccggaggctcaaagagtat
gtgctgacggaggatgacttgaaggagcatggctacccgttaccctgtcccgagagacct
ggccgggctattgtctttgctgccgaagagaagaaaatgactgatggttcttgcaggatt
tgttgtcgttgtggcacagaatacatggtatcaccttctggaaattgtgtccgtaaagaa
gaatgcatccatcactgggggagattgcgcaagcaaagagtgccaggtggctgggaaaca
cattacagctgttgttcgggagctgtaggttcactcggatgccaagttgcaaaacaacat
gtccatgatggccggaaggaaagcctggaaggttttgtgaagacgtttgaaaagttgacg
agggcagatgggcatcctggcatctacgccttggattgtgaaatgtgttacactaagcaa
ggtttagagctgacgcgcgtcactgtgatcaactcagacctgagagtggtctacgatacc
tttgtcaaaccagactccaaagttgtggattacaacactcggttttcgggtgtgacggag
gcagatctggaaaatgcatcgataactcttcgggatgtccaggcagttctcttgagtatg
ttcagtacagacactatcctgataggccacagtttagaaagtgacttgtttgcactaaag
cttatccactctatggtggtggacacagctgtcgttttccctcaccgcctgggtttgcct
tacaagcgggcattgcgtactttgatggcagattacctcaagcgcatcatccaggatagc
gtggaaggccatgactccagtgaggatgcccgagcctgcatggagctgatgatctggaag
atcaaggaagacgctaaagtgaagcgatga |