Ahaetulla prasina (Asian vine snake): 131188557
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Entry
131188557 CDS
T09329
Symbol
SCARF1
Name
(RefSeq) scavenger receptor class F member 1 isoform X1
KO
K24318
scavenger receptor class F member 1
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
131188557 (SCARF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
apri04131
]
131188557 (SCARF1)
Membrane trafficking [BR:
apri04131
]
Endocytosis
Phagocytosis
Scavenger receptors
131188557 (SCARF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_2
EGF_PEAR1L
EGF_laminin
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
131188557
NCBI-ProteinID:
XP_058019860
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All DBs
Position
1:complement(214555..221634)
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AA seq
675 aa
AA seq
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MMERRWVPPPQLLLLLLLLGLPDSGRGTSELELGGRHVCTTEDSLPPVLVCCPGWKQVGS
ECPLALCLGADACQEREICVRPAVCRCRPGFFGANCSARCPEQFWGPDCKQNCHCHPHGR
CHPANGECSCHLGCCGHCRNREPCSPTEGDCLACDPGWNGTRCWQPCPPGLYGDNCTQPC
PRHCLQGETCLPQTGQCQNCEAGFMGSRCEASCPPGFFGEGCRSSCPDCFFGSCDPASGT
CLCQPGYWGTSCNQSCPEAFHGPNCSVVCPCAGGPCHPVSGDCPWEIQGQEALLAGILGP
LLLLLGLCCCCCCCHHRCRGAASLVRAPGAERDLFPPAKHHLIAGLPGLPSSLPCFSPGG
SKLPRVTVAHRDLEVPFSPSFIEPTSTAWPSDSSFGSSEGVNEEMGGCQGSQSALPPSEA
LPEGSILLGAAALHSSPFAIPRTSSIAKGKRPSVSFAEGTHFGPQSPRALPEALNPARKP
TASKSSVQGPPPLQLLLNRPTGASWHSLGKSCYENVAPAAWEDSGWAPEGHHPGSCRSWA
GGSQHLVQRAEHPEADAVEACVHESSITTIYMTVGQAGRFSKDPPLAVQWHQSSGQEEAA
WPRSLQKVPWKALDAAKGTSRKLAAEKQPSTAEAQGLLAPDKQAEGGGSRGTLEPRPLPG
GAQPVKQTCPASEFA
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgatggagcgccgctgggttcctccgccgcagctgctgctgctgctgttgctgctcggc
ctgccggactccgggcgcggcacctcggagctggagctcgggggaaggcacgtgtgcacg
acggaagatagcctaccgcccgtcctcgtctgctgcccgggatggaagcaagtggggtcc
gagtgccccctggccctctgcttgggcgccgacgcctgccaggagcgggagatctgcgtt
cgcccggcggtctgccgctgccggccgggcttcttcggggccaactgcagcgcccggtgc
ccggagcagttctggggaccagactgcaagcagaactgccactgccacccccacggcagg
tgccatccagccaacggagagtgcagctgccatctgggctgctgcggtcactgcaggaac
cgagagccctgctcccccacagagggggactgcctggcctgcgaccccggctggaatggg
acccgttgctggcagccgtgccctccggggctgtatggagacaactgcacccagccatgc
ccccgtcactgtctccaaggagagacttgcctaccgcagacaggacaatgccagaactgc
gaggcaggattcatggggtcgaggtgtgaggcctcctgtccccctggcttcttcggagaa
ggctgccggtcctcttgccctgactgcttctttgggagctgtgatcctgcttctgggacc
tgcctctgccagcctggctactggggcaccagctgcaaccagagctgcccggaagccttc
catggccccaactgctctgtggtctgtccctgtgcagggggaccatgccaccctgtttct
ggagactgcccatgggaaatccaaggccaggaggccctccttgcaggcattctgggcccc
ctcctgctcctgctggggctctgctgctgctgctgctgctgccaccaccgctgccgtggg
gcagcctctctggtcagggcaccaggggctgagcgggatctcttccctccagcgaaacac
cacctgatagctgggttgcccggcctcccttccagcttgccctgcttctcaccagggggc
tcaaagcttccacgggtgacagtcgcccaccgagacctggaggtccccttcagccccagt
ttcatcgaaccaacatccactgcctggccctcggacagctcctttggctcttctgaggga
gtcaacgaagaaatggggggctgccaagggtctcagtctgctctccctcccagtgaagcc
ttaccagaaggcagcattctcctcggggcagcagcgttgcactcctcgcccttcgccatc
cctcgcacctccagcatcgccaagggcaagcggccctccgtctcctttgcagaagggacc
cactttggccctcagagccccagggccctcccagaagccctcaaccctgcccggaagcca
acagcctctaagagctcagtccaaggacctcctcctctgcagctcctcctcaaccgcccc
acaggggcctcatggcactccttgggcaaaagctgttatgagaatgtggcaccagctgcc
tgggaggacagtggctgggcccctgaaggtcaccatcccggcagctgcaggagctgggct
ggtggctcccagcacctggtgcagagagcggagcacccggaggcagatgctgtggaagct
tgcgtccatgagtccagcatcaccaccatttacatgaccgtgggccaagctggaaggttt
agcaaagacccccctctggctgtccaatggcatcagagcagcgggcaggaggaagctgcc
tggccaagaagtctgcagaaggtgccttggaaggctctggatgctgcgaagggcacctca
aggaagctggccgcagagaaacagcccagcacagctgaagctcaaggcctgctggctcct
gacaagcaggcggagggtggagggagcaggggcaccctagagccacgacccctccctgga
ggggcacagccagtgaagcaaacatgccctgcctctgagtttgcctga
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