Ahaetulla prasina (Asian vine snake): 131188560
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Entry
131188560 CDS
T09329
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131188560 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
apri03041
]
131188560 (PRPF8)
Spliceosome [BR:
apri03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
131188560 (PRPF8)
Complex C
U5 SnRNP specific factors
131188560 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
131188560
NCBI-ProteinID:
XP_058019865
LinkDB
All DBs
Position
1:complement(234607..252366)
Genome browser
AA seq
2335 aa
AA seq
DB search
MAGVFPFRGPCPPMPTPLTPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYIAQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLKDSRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKETPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDLATE
VAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMAENPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPGQSSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagtctttcctttccggggcccttgccccccaatgcctacacccttgactcca
ttgcccgactacatgtcggaggagaaattgcaggagaaagcccgcaaatggcagcagttg
caggcaaagcgctatgccgaaaagaggaaatttggctttgtggatgcccagaaggaggac
atgccacctgaacacgtgaggaagatcatccgtgatcatggagacatgaccaacaggaaa
ttccgtcatgacaagcgagtgtatttgggggccctgaagtacatgccccatgcagttctg
aaactcctagagaacatgccgatgccctgggagcagatccgggatgtgcctgtcctctat
catatcaccggggccatttcctttgtgaacgagatcccgtgggtgatcgagccggtgtac
atcgcccagtgggggtccatgtggatcatgatgaggcgggagaagagggacaggcggcat
ttcaagcgaatgcgcttcccgccctttgatgatgaagagccccccctcgactacgcagac
aacatcttggatgtggagcccctggaggccatccagctggagctggacccagaggaagac
gctcccgtcttggactggttctatgaccaccagcccctgaaagatagccgcaaatacgtc
aacggctccacctaccagcgatggcagttcaccctccccatgatgtccaccctctaccgc
ctggccaaccagctcctcacggatctcgtggacgacaactacttctacctcttcgacctg
aaggccttcttcacctccaaggccctcaacatggccatcccgggggggcccaagtttgag
cccctggttcgggacatcaacctgcaggatgaggactggaatgagttcaatgacatcaac
aagatcatcatccggcagcccatccggaccgagtacaagattgccttcccctacctctac
aacaatcttccccaccacgtccacctcacttggtatcatacccccaatgtggtcttcatc
aaaacagaggatccagacctgccagctttctactttgatcccctcattaaccccatttca
cacagacattcagttaagagccaggagccgctccctgatgacgacgaggagtttgagctg
ccagagtttgtggagcccttcctcaaagaaacccctctttacacggacaacacggccaac
ggcattgccttgctctgggcaccacggccttttaacttgcgctctggccgcacccggaga
gccctcgacatacctctggtcaagaactggtaccgagagcactgccctgctgggcagcct
gtgaaggtgcgggtctcttaccagaagctcctgaagtattacgtcttgaacgcgctcaag
cacaggccccccaaggcacagaagaagaggtaccttttccgctccttcaaggccaccaag
ttcttccagtccaccaagctggactgggtggaggtggggctgcaggtctgccgccagggc
tacaacatgctcaaccttctgatccaccgcaagaacctcaactacctccacctggactac
aacttcaacctgaagcccgtcaagaccctcaccactaaggaaaggaagaagtctcgcttt
ggcaatgccttccacctgtgccgggaggtgctgcgtttgaccaagctggtggtggacagc
cacgtccagtacaggctaggaaatgtggatgccttccagctggcagatggcctccagtac
atctttgctcatgtggggcagctgactgggatgtaccggtacaaatacaagctgatgagg
cagatccggatgtgcaaagacctcaagcacctcatttattaccgcttcaacacagggccg
gtagggaagggccctggctgtggtttctgggctccaggttggcgtgtatggctcttcttc
atgcgaggaattacgcctctgctggagcggtggctcgggaacctcctggccaggcagttt
gaaggccgccactcaaagggggtagccaagactgtcaccaagcagcgggtagagtctcac
tttgacctggagctgcgggcggcagtgatgcacgacatcctggacatgatgcccgagggg
atcaagcagaacaaggcccggaccatcctgcagcacctgagtgaagcctggcgatgctgg
aaggccaatatcccttggaaggtcccaggactgccaactcccattgagaacatgatcttg
cggtatgtgaaggccaaagcagactggtggaccaacacagcgcattacaaccgggagcgc
atccgccgcggggccactgtggataagacggtctgcaagaagaacctgggccgcctgact
cgcctctacctgaaggctgagcaggagaggcagcacaattatctgaaggatggtccatac
atcaccgcagaggaggctgtggccgtttacaccaccacggtgcattggctggagagtcgg
cgcttctcccccatccctttccctcccctctcctacaagcacgacaccaagcttctgatc
ttggccctggagaggctgaaagaggcttacagtgtgaagtctcgtctgaaccagtcccag
cgggaggagctgggcctgatcgagcaggcctatgacaaccctcacgaggccctttcacgc
atcaagcgacatttgctgactcagcgagccttcaaggaggtgggcattgagtttatggac
ctctacagccacctggtccctgtctatgacgtggagcccctggagaagattacagatgcc
tacctggaccaatacctgtggtatgaggcagacaagagacgtctcttccctccatggatc
aagccagctgacacagagccccctccgttgctagtatacaagtggtgccaaggaattaat
aacctgcaggacgtgtgggagaccagcgaaggggagtgcaatgtgatgctcgagtcccgc
tttgagaagatgtacgagaagattgacttgacgctgcttaacaggctactgcgtctcatt
gttgaccacaacatcgctgactacatgacagctaagaacaacgtggtcatcaactacaag
gacatgaaccacaccaactcctatgggatcatccggggcctgcagttcgcctccttcatt
gtccagtactacgggctggtgatggatctgctggtgcttggtctgcaccgggccagtgag
atggctggccccccgcagatgcccaacgacttcctcagcttccaagacttggccacagag
gtggcccacccaatacgcttattctgcagatacatcgaccgcatccacatcttcttcagg
ttcaccgcagatgaggctagggacctgatccagcgctacctgactgagcacccggatcca
aacaacgagaatattgtgggctacaacaacaagaagtgctggcctcgtgacgctcgcatg
cgcctcatgaagcatgacgttaacctgggccgtgctgtcttctgggacatcaagaacagg
ctgccgcgctctgtcaccacggtgcagtgggagaacagctttgtgtctgtgtacagtaag
gacaacccgaacctgctgttcaacatgtgcggctttgagtgtcgcatcctgcccaagtgc
cggacaagctatgaagagttcacccacaaggacggcgtgtggaacttgcagaatgaggtg
accaaggaacgcaccgcacaatgtttcttaagagtggatgatgagtccatgcagcggttc
cacaaccgggtcaggcagatcctgatggcctcgggctccaccaccttcaccaagatcgtg
aataagtggaacacagccctgatcggcttaatgacctacttccgagaggctgtagtgaac
acccaggagctgctggacttgctggtgaagtgtgagaacaagatccagactcggatcaag
attggcctgaactccaagatgcccagccgcttcccacccgtggtcttctatacccccaag
gagctcgggggactgggcatgctgtccatgggccacgtcctgatccctcagtctgacctc
aggtggtccaagcagacagatgtgggcatcactcatttccggtccgggatgagccacgag
gaggaccagctgatccccaatctgtatcggtacatccagccgtgggagagtgaattcatc
gactcccagcgagtttgggccgaatacgccctcaagcggcaggaggccattgctcagaac
aggcgcctgaccctggaggacctggaggactcgtgggacagaggcatcccacgcatcaac
acactcttccagaaggaccggcacacgctggcctatgacaagggctggagagtcaggacg
gatttcaagcagtaccaggtgctaaagcagaaccccttctggtggacccaccagcgccac
gacgggaaactctggaacctgaacaactaccgcacggacatgatccaggccctgggcggg
gtggagggtatcctggagcacacactcttcaagggcacttacttccccacctgggagggg
ctcttctgggaaaaagccagtggctttgaggagtccatgaagtggaagaagctgaccaac
gcccagcgttcgggtctcaaccagatccctaaccggaggttcaccctctggtggtctccc
accatcaacagggccaatgtgtatgtgggcttccaggtgcagttggacctgactggcatc
ttcatgcatggcaaaatccccacgctgaagatctccctgatccagatcttccgggctcac
ttgtggcagaagatccacgaaagcattgtcatggacctctgccaggtgtttgatcaggag
ctggacgccttggagattgagacagtgcagaaggagaccatccaccccaggaagtcctat
aagatgaactcctcctgtgcagacatccttctcttcgcctcttacaagtggaacgtctcc
cggccctccctgctggcagactccaaggacgtgatggacagcaccaccacccagaagtac
tggatcgacatccagctgcgttggggagactatgattcacacgacattgagcgttacgcc
agggcaaagttcctggactacacgacggacaacatgagcatctacccctcccccactggg
gtcctcattgccattgacctggcctacaacctgcacagcgcctacgggaactggttcccc
ggaagcaagccgctgatccaacaggccatggccaagattatgaaagccaatcccgccttg
tacgtgctgagggaacggatccgcaaggggctgcagctttattcctcggagcccactgag
ccctacctgtcctcgcagaactatggggagctcttctccaaccagatcatctggtttgtg
gacgacaccaatgtctacagggtcaccatccacaagacctttgaggggaacttgaccacg
aaaccaatcaatggggccatcttcatcttcaaccctcggaccgggcagctcttcttgaag
atcatccacacttctgtctgggctgggcaaaagcgtttgggccagctggccaagtggaag
acggcagaggaggtggcggctctgatccggtccctgcctgtggaggagcagcccaagcag
attatcgtcacccggaagggcatgttggaccctttggaggtgcacttgctggacttcccc
aacattgtgatcaaaggctcggagctgcagctacccttccaggcctgcctgaaggtggag
aaatttggggacctcatcttgaaggcaaccgaaccccagatggtcctcttcaacctttat
gatgactggctgaagactatctcttcctacacggccttttcccgcctgatcctcatccta
cgggcactgcatgtcaacaacgatcgagccaaagtcatcctgaagccggacaagaccacc
atcaccgagcctcaccacatctggcccaccttgacagatgaggagtggatcaaagtggag
gtgcagctgaaggacctgatcttggccgactacggcaagaagaacaatgtgaatgtggct
tccttgacccagtccgagatccgggacatcatcctcggcatggagatctcggccccctcc
cagcagcggcagcagatcgcagagatcgagaaacagaccaaggagcagagccagctgaca
gccacccaaacgcggacagtcaacaagcacggcgacgagatcatcacctccaccaccagc
aactatgagacccagaccttctcgtccaagaccgagtggcgggtcagggccatctctgcg
gccaacctgcacttgcgcaccaaccacatctacgtctcctcggatgacatcaaagagacc
ggctacacgtacatcctgcccaagaatgtcctgaagaagttcatctgcatctccgacctg
cgagctcagattgcagggtacctctatggggtgagtcccccagacaacccccaggtgaaa
gagattcggtgtattgtgatggtgcctcagtggggaacccatcagactgtccacctcccc
ggccagctgccccagcatgagtacctcaaggaaatggagcccctggggtggattcacacc
cagcccaatgagtctccccagctctccccacaagacgtcaccacccacgccaaagtcatg
gccgagaacccctcctgggacggggagaagaccatcatcattacctgcagcttcactccg
ggctcctgcaccttgacagcctacaaactgacacccagcggctatgagtggggccggcag
aacacagacaagggcaacaaccctaagggctacctgccctcccactatgagcgggtgcag
atgctgctctcggaccgcttcctgggcttcttcatggtgccgggccagagttcctggaac
tacaacttcatgggtgtccggcacgaccccaacatgaagtacgagctgcagctggccaac
ccgaaggagttctaccatgaggtccatcgcccctcccacttcctcaacttcgcccttctg
caggagggggaggtgtactcagcggaccgggaggacctctatgcctaa
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integrated database retrieval system
