Ahaetulla prasina (Asian vine snake): 131188567
Help
Entry
131188567 CDS
T09329
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit isoform X1
KO
K07466
replication factor A1
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri03030
DNA replication
apri03420
Nucleotide excision repair
apri03430
Mismatch repair
apri03440
Homologous recombination
apri03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
131188567 (RPA1)
03420 Nucleotide excision repair
131188567 (RPA1)
03430 Mismatch repair
131188567 (RPA1)
03440 Homologous recombination
131188567 (RPA1)
03460 Fanconi anemia pathway
131188567 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
apri03000
]
131188567 (RPA1)
03032 DNA replication proteins [BR:
apri03032
]
131188567 (RPA1)
03400 DNA repair and recombination proteins [BR:
apri03400
]
131188567 (RPA1)
Transcription factors [BR:
apri03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
131188567 (RPA1)
DNA replication proteins [BR:
apri03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
131188567 (RPA1)
DNA repair and recombination proteins [BR:
apri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
131188567 (RPA1)
MMR (mismatch excision repair)
131188567 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
131188567 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CATSPERD-E_C
IBR
Motif
Other DBs
NCBI-GeneID:
131188567
NCBI-ProteinID:
XP_058019887
LinkDB
All DBs
Position
1:361178..402941
Genome browser
AA seq
576 aa
AA seq
DB search
MLMSDGANPLSSFMLATQLNPLVDDQSLTANAICQINRFIVNTLKDGRRVVVLMEMEVLR
PGHAVPTKIGNPVPFTEGAGQAGSRPPATGPATNPFQSRPAGFQSGAPDAGSSAKYPGPS
KLLGNTGSSGILSTPGGSQVKVVPIASLNPYQSKWTICARVTQKGQIRTWSNSRGEGKLF
SIEMVDESGEIRATAFNDQVDKFFPLIELNKVYYFSKGHLKTANKQYTSVKNDYEISFSN
ETSVIPCEDAEHLPSVQFDFVAIGDLENTSKDSLVDVIGVCKSYEDTQKVTIKSSNREVF
KRELHLMDMSGKTVTVTLWGADAEKFDGSRQPVVAIRGARVSDFGGRSLSVVSSSTLLVN
PDCPQSFKLRGWFDSEGQHLESVSISSGRGGLATGGNTNWKTLNEAKSENLGQGDKADYF
SCVGTVVYLRKENCMYQACPTQDCNKKVIDEQNGLYRCEKCDREFPNFKYRMILSVNIAD
FQDNQWVTCFQESAEAILGQNTAYLGELKEKNDHAFDEVIQNANFTTHEFRIRVKLETFN
DESRLKATAVEVKPINYKEYCQRLILNIRRNATRLG
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgctgatgagcgacggcgccaaccccctttcctcttttatgctggccacacagctgaat
cctctggtggatgaccagagcttgactgcaaatgccatttgccagattaaccgcttcatt
gtgaacactctgaaggatggaaggagagtggtggtcttgatggaaatggaggttctgcgg
ccaggtcatgcagtccccaccaagattggaaacccggtgccgttcactgaaggagctggg
caagcagggagccggccaccggccaccggcccagcaaccaaccctttccagagcaggcca
gccggattccagagtggggccccagatgcagggtcttcagcaaagtatcccggcccttcc
aaactgctggggaacacagggagctccggcatcctgagcactccagggggctctcaggtc
aaagtggtgcccattgccagcttgaacccttaccagtccaagtggaccatttgtgcccga
gtgacccagaagggccagatccgcacctggagcaactcccggggcgaagggaaactcttc
tccatagagatggtggacgagagcggtgagatccgagcaacggcctttaacgaccaagtg
gacaagtttttccctctcatcgagttgaacaaggtctactacttctccaagggccacttg
aagacggccaacaagcagtacacctccgtgaagaacgactatgagatcagcttctccaac
gagacgtccgtcattccctgtgaggatgccgagcacctgccctcggtgcagttcgacttt
gtggccatcggggacttggagaataccagcaaggactccctcgtggacgtgattggggtc
tgcaagagctacgaggacactcaaaaggtcaccatcaagtcttccaaccgggaggtcttc
aagagggaactgcacctgatggacatgtcgggcaagactgtgacggtcactctctggggt
gcggacgcagagaagttcgatggctcccggcagccagtggtggccatccggggggcccga
gtctcagactttggggggcgtagtctctccgtggtttcctccagcaccctcctggtgaac
cccgactgcccgcagtccttcaagctgcggggctggtttgattcggaagggcagcacctg
gaatctgtctccatctcttcggggcgaggtgggctggcaacagggggcaacaccaactgg
aagaccctgaacgaggccaagtcggagaacctgggccaaggagacaaggccgactacttc
agctgcgtgggcacagtggtgtacttgcgcaaggagaactgcatgtaccaggcctgcccc
acccaagactgcaacaagaaggtgattgacgagcagaacggcctctaccgctgcgagaag
tgtgaccgggagttccccaacttcaagtaccgcatgatcctgtcggtaaacattgcggac
ttccaggacaaccagtgggtgacctgcttccaggagtctgcggaggccatccttgggcag
aacacagcttacctgggggagctgaaggaaaagaacgatcacgctttcgacgaggtcatc
cagaacgccaactttaccacccacgaattccggatccgagtcaagctggagacgttcaat
gatgagtcgcgcctgaaggccacggccgtagaggtgaaacctatcaactacaaggaatac
tgtcagaggctgatcctgaacatccgcaggaacgccacccggctcggctga
DBGET
integrated database retrieval system
