Ahaetulla prasina (Asian vine snake): 131189130
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Entry
131189130 CDS
T09329
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
131189130 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apri03400
]
131189130 (MSH2)
DNA repair and recombination proteins [BR:
apri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
131189130 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_27
HTH_RNase_II
MCU
Motif
Other DBs
NCBI-GeneID:
131189130
NCBI-ProteinID:
XP_058020991
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Position
1:complement(45383510..45474540)
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AA seq
938 aa
AA seq
DB search
MAASIEACVSGPREGCWPEGSGAESGFIRAVLALPAKPNTTVRFFERGDYYTVHGEDAKL
AATEVFKTQAIIRILGSGTQKLESVALSKMNFEYFVRNLLLIRQYRAEVYKNKAGNKSTK
ESEWYLAYKGSPGNLVQFEDVLFSNHDMSSSAGVVAIKLSSVNGQKVVGVGYVDSLARKL
EISEFADNDQFSNLEALLIQMGPKECLLPVGETAGDMEKLKQVVQRGGILITDRKKTEFS
TKDAVQDLNRLLQSGKKDRVSSAALPEMDKQVAISSLSVVIKYLELLNDESNFGQFELTT
FDLNQYMTLDHAAVRALNLFQDSSEFTQGTHSLAGLLNKCRTPQGQRLVNQWIKQPLMDK
NKIEERLDMVEAFMEDGELRQILQEDLRRFPDFNRIGKKFQKKATLQDCYKMYQAINQLP
NVIQALEKNNGNCNMLLDAIFTKPLKELNCDFSNFQKMIDETLDMNTVESHEYLVKPSID
PNLAELRKSMDKLEEKMQGVLKIAAKELSLEPGKSIKLECNAQFGHFFRITYREEKVLRN
NAKYKILETQKNGVKFSNSALKDINEDYMKNRKEYEEMQDAVVKEIINVASGYKEPIQIL
NDVIAQLDAIVSFAHASNSAPIPYVRPVILEKGQGRIILKASRHPCIEVQDDVAFIPNDV
TFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCDSAEVTVVDCILARVGAG
DSQLKGVSTFMAEMLETSSILRTATEHSLIIIDELGRGTSTYDGFGLAWAISEYIASKMK
AFAMFATHFHELTALADQIPTVNNLHVTALTTKETLTMLYRVKKGACDQSFGIHVAELAA
FPKHVIECAKAKALELEDFQNIGISQEEDEEPAAKRCYREKQEGEQIIQDFLSQVKAMPL
TEMSEEEIRTKLKELKDYVLRKNNSFVNGIISRINGTS
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctccatagaagcttgtgtttctggtccacgggagggatgctggcccgaaggc
tcgggtgccgaaagcggctttattcgcgccgtcttggcgttgcctgccaaaccgaatact
actgtgaggttctttgagcgcggcgactactacacggtgcatggcgaagatgcaaagctg
gcggcgacggaggtcttcaaaacacaagcgatcattcggatcctgggctcaggaactcag
aaactcgagagtgttgcactcagcaagatgaattttgaatattttgtgcgaaatcttctt
ctgattcgtcagtacagggctgaggtatacaagaacaaggcaggaaataaatccaccaaa
gaatctgaatggtatttggcctataagggttctccaggtaaccttgttcaatttgaagat
gttctttttagtaaccatgatatgtcctcttcagctggtgttgtagccattaagctgtcc
tcggttaatggacagaaagttgttggagtaggatatgtggattcactggcaagaaaatta
gaaatatctgaatttgcagataatgatcagttttccaatcttgaagcactgttgatacaa
atggggccaaaggaatgtttgctgccagttggggagactgctggagatatggagaaactg
aagcaggtggttcaaaggggaggaatcctgatcacggataggaaaaagactgaattttca
acaaaagatgctgttcaagatctcaaccgtttgctgcaatcaggaaagaaggaccgtgtg
tctagtgcagcattacctgaaatggataagcaggttgccatctcttctctgtctgtagtg
attaaatacttagagctgttaaatgacgagtctaactttggacaatttgaacttaccacg
tttgaccttaatcagtatatgaccctggatcatgctgctgtcagagcccttaatcttttt
caggattcttcagaatttacccaaggaacacattcactggctggattgttaaataaatgc
agaacacctcaaggacaaaggctagtcaaccagtggatcaaacaaccattgatggataag
aacaaaatagaagaaaggttagatatggtggaggccttcatggaagatggagaactaagg
caaattcttcaggaagatctccgccgcttcccagacttcaatcggataggaaaaaaattt
cagaagaaagctactctgcaggactgttacaaaatgtatcaggcaattaatcagctacct
aatgtgatacaggcactggaaaaaaataatggaaactgcaatatgctactagatgcgata
ttcacaaaacctcttaaagagctaaattgtgatttctccaatttccaaaagatgatcgat
gaaactttggacatgaatacggtggaaagtcatgaataccttgtcaaaccttccattgac
cccaatcttgctgaattgagaaaaagtatggataaactggaagaaaaaatgcagggtgtc
ctgaaaattgcagccaaggaattaagtttggaacctggcaagagtatcaaattagaatgc
aatgcacagtttggacattttttcagaattacctacagagaagagaaggttctgcggaat
aatgcgaaatataagatcttggaaacccagaaaaatggggtgaagttctctaacagtgca
ttgaaagatattaatgaagactatatgaagaacagaaaagaatatgaagaaatgcaagat
gctgtagttaaagaaataatcaatgttgcatcagggtataaagaacccattcaaattctc
aatgatgtcattgcccagctagatgccattgtcagttttgctcatgcatcaaattcagca
ccaataccatatgtgcgcccagttattctagaaaaagggcaaggaagaattatcttgaaa
gcttccaggcacccttgcattgaagttcaagatgatgttgccttcatcccaaatgatgtt
acttttgagaaggacaaacagatgttccacatcataactgggccaaacatgggaggaaaa
tcaacttatatacggcagactggggtgattgttcttatggcccaaattggatgttttgtg
ccgtgtgactctgcagaagtgactgtcgtagattgcatcctggctcgagttggagctgga
gatagtcaactgaaaggggtatctaccttcatggcagaaatgctggagacttcctccatc
cttaggactgcaaccgagcattctttgataatcattgatgagttagggagaggaacatca
acatatgatggatttggattggcttgggcaatttctgaatacattgccagcaaaatgaaa
gcttttgctatgtttgctactcattttcatgaattgacagcactggctgatcaaataccc
actgtaaataacttgcatgttacagcattaaccacaaaggaaacactgacaatgttgtac
cgtgtgaaaaaaggggcctgtgaccagagctttggtatccatgtagcagaattagctgcc
tttcccaaacatgtcattgagtgtgccaaggccaaagccctggaactggaggacttccaa
aacattggaatatctcaggaggaggatgaagaaccagctgccaaaagatgctacagggag
aagcaggagggggaacaaataattcaagatttcctttctcaagtgaaagcaatgccattg
acagaaatgtctgaagaagaaatccggaccaaactaaaggaattaaaggactacgttttg
aggaaaaataattcttttgtaaatggaatcatttcccgcatcaatggtacctcatga
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