Ahaetulla prasina (Asian vine snake): 131189803
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Entry
131189803 CDS
T09329
Symbol
YTHDC2
Name
(RefSeq) 3'-5' RNA helicase YTHDC2 isoform X1
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
apri
Ahaetulla prasina (Asian vine snake)
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
apri03041
]
131189803 (YTHDC2)
Enzymes [BR:
apri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
131189803 (YTHDC2)
Spliceosome [BR:
apri03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
131189803 (YTHDC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
HA2_C
OB_NTP_bind
Helicase_C
R3H
DEAD
HA2_N
Ank_2
AAA_22
AAA_19
nSTAND3
Ank
ATPase
Ank_4
PhoH
AAA_7
T2SSE
SRP54
AAA_16
AAA_29
TrwB_AAD_bind
ABC_tran
AAA_23
Motif
Other DBs
NCBI-GeneID:
131189803
NCBI-ProteinID:
XP_058022232
LinkDB
All DBs
Position
2:complement(251807370..251851069)
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AA seq
1460 aa
AA seq
DB search
MSRPNSVSPRPSGSGPRPSGTGSTSGGPSTASTASSSSCSGGGRAKGLKDIRIDEEVKIA
VNISLERFRYGDQREMDFPSSLTSTERAFIHRLSQSLGLISKSKGKGANRYLTVKKKDGS
ELAHTVMTCNLIPNTKHAIRSLVQRFPVTNKERTELQPKTERGNVFAVEAENREMSKTSG
RLNSGIPQIPVKRGESEFDSFRQSLPVYEKQDEIVRIIKENKVILIVGETGSGKTTQIPQ
FLLDDCYKNGIPCRIFCTQPRRLAAIAVAERVAAERREKIGQTIGYQIRLESRVSPKTLL
TFCTNGVLLRTLMAGDSALSTVTHVIVDEVHERDRFSDFLLTKLRDMLQKHSTLKLILSS
AALDVNLFLRYFGGCPVIYIPGRPFEVKEMFLEDILRSTGYTNKEMIKYKKEQQREEKQQ
TTLTEWYSAQDNSKPELQRQRAVPNVAEEYELLDDGGDTVFSQLAEKDVNCLEPWLIKEM
DACLSDIWLHKDIDAFAQVFHLILTENVSVDYRHSETSATTLMVASGRGFLNQVEQLIGM
GANVHIKSSNGWTALDWAKHFGQTEVIDLLESYCASLESGNLDESSLVHANAGELNIEDR
ELLKAYHYSFDDEKVDLDLIMHLLYNICHSCDAGAVLIFLPGYDEIVGLRDRILFDDKRF
ADNAHRFQVFMLHSNMQTSDQKKVLKTSPLGIRKIILSTNIAETSITVNDVVFVIDSGKM
KEKSFDALNCVTMLKMVWISKASAVQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELL
RMPLQELCLHTKLLAPINCPIADFLMKAPEPPPALIVRNAVQILKTIDAMDTWEDLTELG
YHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRF
TAGTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGF
VRARGGGDIRDVNTNSENWAVVKGALVAGMYPNIVHVDRENVVLTGPKEKKVRFHPASVL
SQPQYKKIPPANGQVAAIQALPTDWLIYDEMTRAHRIANIRCCSVVTPVTVALFCGSARL
PSNALQEPSSFRVDGVPNDSSDSEMEDRTTANLAALKLDEWLNFKLDPEAATLLLQLRQK
WHSLFLRRMRAPSKPWSQVDEATIRAIIAVLSTEEQSAGLQQPSGIGQRPRPMSSEELPL
ASSWRSNTSRKSSGESEFADDAFNTERNTPKATLSYDINKEQNNTILRVLMKSTSPAFHQ
PLKYKERGVVHSKRSTDDRADQTSVKSADNYPSPCASPSPPSSGKGSKSPSPRPNMPVRY
FIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSVVSLVFSVQGSGHFQGFARMSS
EIGREKSQDWGSTGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDGQELEPQV
GEQLLQLWDRIPLGERNTAD
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggccgaatagcgtgtcgcctcggccctcggggagcggtccacggccctctggg
accgggtccacaagcggaggcccctctaccgcctccaccgcctcgtcgtcctcctgctcc
ggcggtggtcgcgctaaaggactgaaggacattcgtattgacgaagaagtgaaaatcgct
gtgaatatctctctggagcggtttcggtatggagaccaacgagaaatggattttccttcg
tcattgaccagcactgagagagcttttattcatcgactaagtcaatctcttggtttgatt
tctaaaagcaaagggaaaggagcgaacagatatctaactgtgaagaaaaaagacggatcc
gaattagcacacacagtgatgacttgtaatttgattccaaacacaaagcatgctattaga
agcttagttcagagatttcctgttaccaataaagaacgcacagaacttcaaccaaagaca
gagagaggaaatgtatttgctgttgaagctgagaatagagaaatgagcaaaacaagtggg
cgtcttaacagtggcatccctcagatcccagtgaaacggggagaatcagaatttgattca
tttcggcaatctctaccagtttatgaaaagcaagatgaaattgttagaattattaaagaa
aataaagtaattttgattgtgggggaaactggatctggaaaaactactcagatacctcaa
tttctacttgatgactgttacaaaaatggcataccgtgtcgcatattttgcactcaacca
agacgattagcggcgattgctgtggctgaaagagttgctgctgaaagaagagagaagatt
ggtcagactattggttatcagatccgattagaaagcagggtttctccaaaaacgctctta
acattttgcacaaatggtgtattactccgtacacttatggcgggggatagcgcattgtct
actgtaactcatgttattgtggatgaagtccatgaaagagatcgattcagtgattttttg
ttaacaaaattaagggatatgctacaaaaacattcaacattgaaactcatactttctagt
gctgctcttgatgtgaatctctttctcagatattttggaggctgtccagtgatatatatt
ccaggaagaccctttgaagtaaaggaaatgtttttagaagacatactaagaagtacaggc
tatacaaataaagagatgatcaaatacaaaaaagaacagcagcgagaagaaaaacagcag
acaactttgactgaatggtattctgcgcaagataatagcaagcctgaattgcaacgacag
agggcagttccaaatgtagctgaagaatatgaactgctggatgatggcggtgacactgtc
ttcagtcaattggctgaaaaagatgttaattgtcttgaaccttggttaattaaagaaatg
gatgcttgtctttctgatatttggctacataaggacattgatgcttttgcacaagtattc
catctcattttaactgaaaatgtcagtgttgattacaggcatagtgaaacaagtgcaaca
acattaatggtagcttctggaagaggtttcttgaatcaagtagaacagctgattggtatg
ggagcaaatgtccatatcaaatcatccaatggctggacagctttggattgggctaaacac
tttgggcagacagaagtaattgacctgctggaatcctattgtgcctcattagagtctggt
aatttagatgaaagttccttggttcatgctaatgccggtgagctgaatatagaagatcga
gagctcctgaaagcttatcactacagttttgatgatgaaaaggtagatcttgacctgata
atgcacctattgtacaacatctgccatagctgtgatgcaggtgcagttttaatttttctt
cctggatatgatgagattgttggattgagagatcgcatactctttgatgacaaaagattt
gcagataatgctcacagattccaggtatttatgctgcactcaaatatgcagacatctgac
cagaaaaaggttcttaagacttctcctctaggcatccgcaaaataatactttctacaaat
attgcagaaaccagtatcacagtaaatgatgttgtgtttgtgattgactcaggaaaaatg
aaagagaagtcttttgatgcactgaattgtgtaactatgcttaagatggtgtggatttct
aaagcaagtgctgttcagaggaagggcagggcaggacgttgtcgacctggaatttgtttt
agacttttcagtaggttaagatttcaaaatatgttggaatttcagacacctgaactccta
agaatgcctctacaagagctttgtttacatacaaaattgctagctcccatcaattgtcca
attgctgacttcttaatgaaagctccagagccacctcctgctttaattgtgagaaatgct
gtgcagatacttaagaccatagatgctatggacacttgggaagatttaacagaacttggc
tatcatcttgctgacttacctgtagaaccccatcttgggaaaatggtgctgtgcgctgtg
gttctgaagtgcctggatcctattctgacaattgcttgcacacttgcgtatcgggatcct
tttgtgctacccacacaggcttctcaaaaacgtgcagccatgctgtgtagaaaacgattt
actgctggaacatttagtgaccatatggcccttcttcgggctttccaggcatggcagaaa
gcacgaagtgatggctgggaaagagctttttgtgagaagaacttcctttctcaggcaacc
atggaaattatcataggaatgagaacacagttgcttgggcagctgagagcatcaggtttt
gttagagccagaggtggtggtgatataagggatgtgaacacaaactcagaaaattgggct
gtagttaaaggagccttagtagctggaatgtatccaaatatcgttcatgttgacagagag
aatgtagttttgactggaccaaaggagaaaaaagtccgttttcatcctgcatccgttctg
agccagccccagtataaaaagattcctcctgcaaatggccaagtagcagctattcaggca
cttcccactgactggcttatatatgatgaaatgacaagagcccaccgaatagctaatatc
aggtgctgttcagttgtgactccagtcacagtggccctcttctgtggatcagctaggttg
ccaagtaatgctttacaggagccttcttccttccgagttgatggtgtccctaacgatagc
agtgatagtgaaatggaggatcgaacaactgcaaacttggctgctttaaaattagatgag
tggctcaatttcaaattagatccagaggctgctaccctcctcttgcagttaagacaaaaa
tggcatagtttatttctgcgacgtatgagagcgccttcaaagccatggtctcaagttgat
gaagcaacaatacgagcaatcattgcggttttgagcaccgaagaacaatctgcaggtctg
cagcaaccttcaggaattgggcaaagaccaagacctatgtcatctgaagaacttccctta
gcatcttcttggagatcaaacactagtcgaaaaagctcaggagaatcagagtttgcagat
gatgcttttaatacagaaagaaatactcccaaagcaactttaagctatgatataaacaaa
gagcaaaacaatacaatattaagagtattaatgaaatctacatctccagcatttcaccaa
ccactgaaatacaaagaaaggggtgttgtgcattccaaacgaagcacagatgacagggca
gaccaaacatctgtgaaatctgcagataattatcccagtccctgtgccagtccttctcct
ccatcatctgggaagggttccaaatctccttctccaaggccaaatatgccagttcggtac
tttattatgaaaagcagcaatttaaggaatcttgagatttcacaacagaagggaatttgg
tctacaactccaagtaacgagaggaaactgaatcgtgctttttgggaaagtagtgttgtt
tccttggtattttctgttcagggatcaggacattttcagggttttgctcgaatgtcttct
gagataggccgtgagaaaagtcaggactggggttctactggtttagggggagtgttcaag
gtggaatggatccggaaggaaagtcttccttttcaatttgctcatcatctgcttaatcct
tggaacgacaataagaaagtacagataagccgagatggccaggaactggaacctcaggtt
ggtgaacagttactacaactgtgggaccgtattcctctaggggagagaaacacagcagac
tga
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integrated database retrieval system
