Ahaetulla prasina (Asian vine snake): 131189907
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Entry
131189907 CDS
T09329
Symbol
CNOT6
Name
(RefSeq) CCR4-NOT transcription complex subunit 6 isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131189907 (CNOT6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apri03019
]
131189907 (CNOT6)
Enzymes [BR:
apri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
131189907 (CNOT6)
Messenger RNA biogenesis [BR:
apri03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131189907 (CNOT6)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
131189907 (CNOT6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
131189907
NCBI-ProteinID:
XP_058022513
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All DBs
Position
2:complement(91748570..91810711)
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AA seq
557 aa
AA seq
DB search
MPKEKYEPPDPRRMYTIMSSEEAANGKKSHWAELEISGKVRSLSSSLWSLTHLTALHLSD
NSLSRIPSDIAKLHNLIYLDLSSNKIRSLPAELGNMVSLRELHLNNNLLRVLPFELGKLF
QLQTLGLKGNPLTQDILNLYQEPDGTRRLLNYLLDNLAGTAKRISTEQPPPRSWIMLQEP
DRARPTALFSVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKAIMQEILSCNADIISLQE
VETEQYYSFFLAELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTV
EFNQLAMANSEGSEAMLNRVMTKDNIGVAVLLELRKELIEMSSGKPHSVMDKQLILVANA
HMHWDPDYSDVKLVQTMMFLSEVKNIIDKASRNLRPSASGEYATIPLVLCADLNSLPDSG
VVEYLSTGGVETNHKDFKELRYNESLTNFSYNGKNGTTNGRITHGFKLKSAYENGLMPYT
NYTFDFKGIIDYIFYSKPQLNILGILGPLDHHWLIENNISGCPHPLIPSDHFSLFAQLEL
VLPFLPPVNGIHLPSRR
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaagaaaagtacgaaccacctgatccacgaaggatgtacacaattatgtcctca
gaagaagcagccaatgggaaaaaatcacactgggcagagttggaaataagcgggaaagtc
agaagcctgagttcatccttatggtcactgacccacttgacagctttgcatctcagtgac
aattccttatcccgtattccttcagatattgccaagcttcataacctgatttatttggat
ctgtcatctaataagattcgtagtttaccagctgagctcggaaacatggtgtcactcagg
gaactccatttaaataacaacctgttacgagttctaccatttgagctgggaaaactgttc
caattacagaccttgggtttgaaaggaaacccacttacacaggacattctgaatctttat
caggaaccagatggaacaagaaggctactgaattatttgcttgataatctggcaggtact
gcaaaaagaatttcaacagaacagcctcctcccagatcttggattatgctacaagaacca
gatagggcaagaccaacagctctgttctctgtcatgtgttacaatgttctgtgtgataaa
tatgctactcggcagctatatggatattgcccatcatgggcactgaactgggaatacagg
aaaaaagctataatgcaggaaattttgagttgtaatgctgacatcataagtcttcaggag
gttgaaactgagcagtactacagttttttcctagcagaattgaaagaacgtgggtacaat
ggattctttagtccaaaatccagagctaggacaatgtctgaacaagaaagaaagcatgtt
gatggttgtgcaatattttttaagacagaaaagttcaccttggttcaaaaacatactgtt
gaatttaaccaattggctatggcaaactccgaaggatctgaagcaatgctgaacagagtc
atgacaaaagacaacattggggttgctgtgctgttagaactgcgaaaggagttaatagaa
atgtcatctggaaagccacactctgtaatggataaacagctaattctggtagcaaatgca
cacatgcactgggacccagattattctgatgtgaagttggttcagacaatgatgttcctt
tctgaagtaaagaacataattgacaaagcctcgcggaatctcaggcctagtgcttcgggg
gaatatgcaacaattccacttgtactgtgtgcagatttgaattccttgccagattctggt
gtggttgaatatttgagcactggtggcgtagaaacaaatcataaggatttcaaggaactg
agatataacgaaagtctcactaacttcagttataatgggaaaaatggaactaccaatgga
aggattactcatggtttcaagttgaagagtgcctatgagaatggtttaatgccttacaca
aattacacatttgatttcaagggtattattgattacatcttctattctaaacctcagctg
aatattcttggcatcttaggacctttggatcatcattggctaatagagaacaatataagt
ggctgtccacacccgctcattccttctgaccacttctcactttttgcacaactggagctg
gtgctgcctttcctgcccccggtaaatggaatccatctgcctagcaggaggtag
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