Ahaetulla prasina (Asian vine snake): 131190102
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Entry
131190102 CDS
T09329
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
apri
Ahaetulla prasina (Asian vine snake)
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
apri04121
]
131190102 (PDZRN3)
Enzymes [BR:
apri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131190102 (PDZRN3)
Ubiquitin system [BR:
apri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
131190102 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
Sina_ZnF
zf-RING_5
zf-C3HC4_4
Prok-RING_4
PDZ_Tricorn
zf-TRAF
TRAF3_RING
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
131190102
NCBI-ProteinID:
XP_058023044
LinkDB
All DBs
Position
2:complement(45090772..45334914)
Genome browser
AA seq
1058 aa
AA seq
DB search
MGFELDRFNGEVDPDFKCNLCNKVLEDPLTTPCGHVFCAGCVLPWVVQQGSCPVKCQRMS
TKELNHVLPLKSLILKLDIKCANRERGCEKVVKLQHLAEHAEMCDYSPAKCRHKGCAEVL
NLRDVDAHMRESCEARPVGICEQGCGLVLTHRERKAGSHCCLQALKAHNGALQAKLAGLE
KELKKEALRAGKREKSLLSQLSAVQLELQMTALRYQKKFTEYSARLDSLGRSLAAFSPSK
GEETKTLNLFLHRDSGSLGFNIIGGRPCMDNQDGPTSEGIFVSKIADSGPAAKEGGLQIH
DQIIEVNGKDLSKATHDQAVEAFKTAKDPIVVQVLRRTPRTKIFSPSHECLLVDIGTQTE
ITFEHIMALTKMGSPTPPVLDPYLLPEEHSSGHEYYDPNVYMGGIHQDMDREDLELEEVD
LHRVNSQDKFGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEIQNR
EEAVALLTSEESKNVSLLIARPEILQLDEGWMDDDRNDFLDDLHMDMLEEQHHQAMQFTA
NMLQQKKKNEEDGGTTDTATILSNQHEKDSGVGRTDDSTRNDESSEQENNGDDHITSSNT
LGSQKKLAYSQDTLGSGDMQFSNESFISADCTDADFLGISVDECERFRELLELKCQVKST
NPYSLYCHNSTLDMSKSDHESVDRELEMLNEELRNIELECLNIVRAHKMQQLKEQFREPW
MLHNSGFRNYNTSIDVRRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLDISPNNSL
CRTADPLTLQGREGAEGTLKLLPSSEDQESSLANPPPPKDADLSQPSEIKERKISEESKS
SVPAPKAGGSTLSSYQHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLVSMCKD
WNSSNQSEPRMEWKVKVRSDGTRYITKRPVRDRLLRERAIKIREERSGMTTDDDAISEMK
MGRYWSKEERKQHIVKAKEQRKRREFMMQSRLECLKEQQGTEDKKEMNIIELSHKKMMKK
RNKKIFDNWMTIQELLTHGTKSPDGTKVYNSFLSVTTV
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atggggtttgagctggatcgcttcaacggggaggtggatcccgatttcaaatgcaatctg
tgcaacaaagttttggaggaccctctcaccaccccttgcggtcatgtgttctgcgccggc
tgcgtcctgccgtgggtcgtgcaacaaggcagttgcccggtgaagtgccagcggatgtcc
accaaggagctgaaccacgtcctgcccttgaagagcctcatcctcaagctggacatcaag
tgcgccaaccgcgagcggggttgcgagaaggtggtcaagctgcagcatttggccgagcac
gccgagatgtgcgactactcgccggctaagtgccgccataagggctgcgccgaggtgctc
aacttgcgcgacgtggacgcgcatatgcgggagagctgcgaggcccggccggtggggatc
tgcgagcaaggctgcggcttggtgctgacccaccgcgagcgcaaggccggctcccactgc
tgcctgcaggcactcaaagcgcacaacggcgccctccaagccaaactggccggcctggag
aaagagctgaagaaagaggcgctgcgggccggcaagcgggagaagtcgctcctctcgcag
ctctcggctgtgcagctcgagctccagatgacagcgctgcgctaccagaagaagttcacc
gaatacagcgcccgcctcgactcgctcggccgtagcctggccgccttttcgcccagcaag
ggtgaagagacaaagacattgaatctttttcttcaccgtgattcaggatctcttggattt
aatataattggtggtcgtccgtgtatggacaatcaagatggcccaaccagcgaaggaatc
tttgtctctaaaatagctgacagtgggcctgctgccaaggaaggaggactccagattcat
gaccagattattgaagtaaatggaaaagatttgtccaaggcaactcacgatcaagctgta
gaagcctttaaaacagctaaagatcccattgtagtgcaagtcctgagaagaacgccacgc
accaagatcttcagtccttctcatgagtgtctcttggtagacataggcactcagactgag
attacctttgaacatatcatggctctaaccaaaatgggctcacctaccccaccagtcctg
gatccatatctcctacctgaggagcattcatcagggcatgaatactatgaccccaatgtt
tacatgggaggcattcatcaagacatggacagagaggacctagaattagaggaagtggat
ctccatcgagtgaacagccaggacaaatttggtcttactgtctgctacagaactgatgat
gaagatgatattggtatttatatcagtgagattgatcccaatagcattgctgcaaaggat
ggccgtatcagagagggtgatcgcataattcaaattaatggaattgagatacagaatcga
gaagaagctgtagctcttttgaccagtgaagaaagcaagaatgtctccttactcatagca
agaccagaaattctccagctagacgagggatggatggatgatgacagaaatgattttctg
gatgacttacatatggacatgctagaggaacagcaccaccaagcaatgcagtttactgcc
aatatgctacagcagaagaagaaaaacgaagaggatggcggtaccacagatactgcaacc
attttatccaatcaacacgaaaaagacagtggcgtaggacgtacagacgacagcactcgg
aatgacgaaagctccgagcaagagaacaatggcgacgatcacattacttcctcaaacact
ttgggaagccagaagaaactcgcttatagccaggacacgctgggcagtggtgacatgcag
ttcagcaatgagtcatttatttcagctgactgcacagatgcagacttccttggcatctca
gtggatgagtgcgagaggtttcgtgaactgctggagctgaaatgccaggtcaaatccaca
aacccgtacagcttgtactgccacaacagtactctggatatgagtaaaagtgaccatgag
agtgtggatagggagctggagatgctgaatgaggagctgcgtaatattgagctggagtgt
cttaatattgtccgagcccataagatgcagcaattgaaggaacagtttcgagagccgtgg
atgctgcataacagtggcttccgcaactacaataccagcattgatgtccgccgacatgag
ctctcggatattactgagctcccagaaaaatcagataaggacagctccagtgcatacaac
actggtgaaagttgccgaagcacaccactcacgttggacatctcccccaacaactctcta
tgtaggacagcagatcctctcactttacaaggcagggagggggcagaaggcactctgaaa
ttgttgcctagttcagaagatcaggaatccagcctggctaacccgcctcctcccaaagat
gctgatcttagccagccatcggaaatcaaggaaaggaaaattagcgaagaaagcaaaagc
tcagttccagctcccaaagccggtgggtccactttgtcttcatatcaacattctccgtac
aagcatgcccatattccagcccatgcccagcactaccaaagctatatgcagcttatccag
cagaagtccgcagtggaatacgcgcagagccagatgagtttggtgagcatgtgtaaagac
tggaactcttcaaaccagagtgaacccaggatggaatggaaagtcaaggtcagaagtgac
ggtactcgctacatcaccaaaaggccagtcagggaccggctgctacgagagcgtgctata
aagatcagagaggagcgcagcggcatgacaacagatgatgatgccatcagtgaaatgaag
atgggccgttactggagcaaggaggaacggaagcagcatattgtgaaggccaaggagcag
agaaagcggcgcgagtttatgatgcaaagtcggttggaatgcttaaaggagcaacaaggg
actgaggacaagaaggaaatgaatatcatagaactgagccacaaaaaaatgatgaagaaa
cgaaacaaaaagatatttgacaattggatgacaattcaagaactcctaacccatggcaca
aaatcaccggatgggacaaaagtttacaactctttcctctcagtgactaccgtataa
DBGET
integrated database retrieval system
