Ahaetulla prasina (Asian vine snake): 131190233
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Entry
131190233 CDS
T09329
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
131190233 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apri03021
]
131190233 (SMARCD1)
03036 Chromosome and associated proteins [BR:
apri03036
]
131190233 (SMARCD1)
Transcription machinery [BR:
apri03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
131190233 (SMARCD1)
Chromosome and associated proteins [BR:
apri03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
131190233 (SMARCD1)
PBAF complex
131190233 (SMARCD1)
GBAF(ncBAF) complex
131190233 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DivIC
Motif
Other DBs
NCBI-GeneID:
131190233
NCBI-ProteinID:
XP_058023377
LinkDB
All DBs
Position
2:complement(154559672..154571346)
Genome browser
AA seq
512 aa
AA seq
DB search
MAARAGFQAVAPSGGGSGAGPGAGPLGPGTPGPPVRMGPAPGQGMYRSPLPGAAYPRPGM
LPGSRMTPQGPAMGPPGYGGSPSVRPGMAQSGMDQSRKRPAPQQIQQVQQQSVQNRNHNA
KKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLR
IFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSLVIE
LDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLAR
LLGIHTQTRPVIIQALWQYIKTHKLQDPHEREYVICDKYLQQIFESQRMKFSEIPQRLHA
LLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAALDNK
IHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKAMTDVVGNPEEERRAEFYF
QPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgggcgggtttccaggctgtagctccgagcggtggcggcagtggagccggc
cctggggcgggaccgctaggaccagggacgccggggcctcccgtgcggatgggcccggct
cccggacaaggaatgtaccgctcccctctgcccggcgctgcatacccgcgccctggaatg
ttgcctggtagccgcatgactcctcaaggacctgcaatgggacctccgggctatggtggg
agcccttctgtccgaccggggatggctcagtcaggaatggaccagtctcgcaaaaggcca
gctcctcagcagattcagcaggttcagcaacagtcagtgcaaaaccgaaatcacaatgcc
aagaaaaaaaagatggctgacaaaattctacctcagcggatccgggaattagtacccgag
tctcaggcatacatggatttgttggcatttgagaggaagctggaccagactattatgcgg
aaacgtttggatattcaggaggctttgaaaaggccaattaaacaaaaaagaaaactacgc
atttttatctccaacacctttaatccagccaagtcagatgcagaagatggagaaggcacc
gtagcctcatgggaactccgagtggaaggacgactattggaagattctgctctctccaag
tatgatgctaccaagcagaagagaaagttctcatccttttttaaatctctggtgattgag
ctggacaaagacctctatggcccagataatcacttggtggagtggcataggactgctaca
acccaagagaccgatgggttccaggtgaaaaggcctggcgatgtgaatgtgcgctgcact
gtcctcctgatgctggattaccagcctccacagttcaaactagacccacgtttggctcgt
ctcttgggaattcacacccagacgcgcccagtgatcatccaagctctgtggcaatacatc
aagactcacaagctgcaggacccccatgagcgggagtatgtcatctgtgataagtacctc
cagcagatattcgagtctcagcgtatgaagttctcagagatcccacagcggcttcacgca
ttgcttatgcctccagagccaattatcattaaccatgtcatcagtgttgatccaaacgat
cagaagaaaactgcttgctatgacattgatgtagaagtagatgatactttgaaaacccaa
atgaattctttcctgctatctacagccagccagcaggagatagctgcactggataacaag
atccatgagaccatagaaaccattaaccagttaaagacccagcgtgaatttatgctgagc
tttgccagagatccccagggtttcatcaatgactggctgcagtcccaatgtcgagacttg
aaggctatgacggatgtcgttggaaacccagaagaagagcgccgagctgaattttacttc
cagccctgggcccaagaggctgtatgcagatatttctactctaaggttcagcagagaagg
caagaacttgaacaagctctgggaatccgcaatacctaa
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