Ahaetulla prasina (Asian vine snake): 131190394
Help
Entry
131190394 CDS
T09329
Symbol
AFDN
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri04517
IgSF CAM signaling
apri04520
Adherens junction
apri04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
131190394 (AFDN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
131190394 (AFDN)
04530 Tight junction
131190394 (AFDN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
RA_3
RA_2
PDZ_2
RASSF8-10_RA
Motif
Other DBs
NCBI-GeneID:
131190394
NCBI-ProteinID:
XP_058023701
LinkDB
All DBs
Position
1:complement(87610144..87711414)
Genome browser
AA seq
1897 aa
AA seq
DB search
MSGGGGVGGGSREEERRKLADIINHWNANRLDLFEISPPTEDLEFHGVMRFYFQDKAAGN
FATKCIRVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERRLDIDEKPLVV
QLNWNKDDREGRFVLKNENDALPPKKTQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKRRE
KEAQQQTLDNHGPFHGDDIENSRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRM
QEFRSSDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDTADFAVIEALEKYSLEKENPKD
YCIARVMLPPGAQHSDDSGAKESILDDDECPLQIFREWPSDKGILVFQLKRRPPDYIPKK
LKKQVDVKLLKGKERIDRSGYGSSLPPEKLPYLVELSPDGSDSRDKPKLYRLQLSVTEVG
TEKFDDNSIQLFGPGIQSHHCDLTNMDGVVTVTPRSIDAETYVEGQRISETTMLQSGMKV
QFGTSHVFKFVDPIQDHIPKGRLDAGHMVKNSRLKSGGVQETTFDLEGDIQSVTGLSTSK
QSINRLDCDRMSTSSTAERSMVKPMIRIEQQDYHKQDGRLQDGPELILPASVEFRENSED
AFLSAIINYTNSSTVHFKLSPTYVLYMTCRYVLSSQYRPDISPAERTHKVIAIVNKMVKM
MEGVIQEVDQVDQKQKNIAGALAFWMANASELLNFIKQDRDLSRITLDAQDVLAHLVQMA
FKYLVHCLQSELNNYMPAFLDDPEENNSQRPKIDDVLHTLTGAMSLLRRCRVNAALTIQL
FSQLFHFINMWLFNRLVTDPDSGLCSHYWGAIIRQQLGHIEAWAEKQGLELAADCHLSRI
VQATTLLTMDKYSPEDIPNINSTCFKLNSLQLHALLQNYHCAPDEPFIPPELIENVVAVA
ENTADELARSDGREVQLEEDPDLQLPFLLPEDGYSCDVVRNIPNGLQEFLDPLCQRAFCR
LTPHPRSPGTWTIYFEGADYESHLLQDNADLAQPLRKEPEIITVTLKKQNGMGLSIVAAK
GAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTGTVVT
LEVAKQGAIYHGLATLLNQPSPMMQRVSDRRGSGKPRPKSEGFELYNNSAQNGSPESPQL
PWTEYNEPKKLPGDDRLLKNRADHRSSPNVANQPPSPGTKKAYTGGTTNKITSVSTGNLC
TEEQVLPARPEAYPIPTQTYTREYFTFPASRSQDRMGPVQNQWASYEEKPQIPAESNHYI
NNSNQRVTRSQEELRDNNIYQAERNQLEVAMQKDMEYIDRKSDSDPWMNSSVDSSTSSQE
HLNSSSKCMPSGSSLTKSGPGRWKTPIITQPMLLAVSQSTRTDLPPPPPPPPMHYAADFD
GLQMDLPLPPPPPPANQLGSQSSQVAAAAERKKREEHQRWYEKEKARLEEERDRKRREQE
RKLGQMRAQPLMPAQSLLPPLQQVKPEKPSTLQRSHETVIRELQPQQQPRTIERRDLQYI
TISKEELSSSDSLSPDPWKRDAKEKLEKQQQMHIVDMLSKEIQELQSKPDRTGEENDRLR
KLMLEWQFQKRLQESKQKDEDEDEEEDDDIDTMLIMQRLEAERRVRLQDEERRRQQQLEE
MRKREAEDRARQEEERRRQEEERTKREAEQKRRQEEEYYNRLEAERRRQHDEAERRLLEP
DDPGLYRPPLPREYEFPSPPLSSNAPPPPPQRNTSYLKTQVLSPDTIYTAKFVAYNDEEE
EDSCLATGQDKYTSTRKSCGDLPPVPPKPQQPSRQPRPVSDGLCLSNSYQPSAVNANSTA
NKMSQPPPPPHKPSFINPSTTKGSNYTGSTGALAGSQESYSDPREKKLKSQDTDIPGAPE
NLTFRERQRLFSQGQDVSNKVKASRKLTELENELNTK
NT seq
5694 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggcggcggtgttggaggaggtagccgcgaggaggaacggcgcaagctggcc
gatatcatcaatcactggaacgcgaaccggctggacctgtttgagatcagtccccccact
gaggatctggaattccatggagttatgaggttttattttcaagacaaagcagctggaaat
tttgcaacaaagtgtatccgtgtgtctagcactgccacaactcaggatgtgatagaaaca
cttgcagaaaaattccggccagatatgcgaatgttatcatccccaaaatattcactttat
gaggtgcacgtcagtggagaagaaagaagattggatatagatgagaagcctctagttgta
caattaaattggaacaaagatgatcgtgaaggaagatttgtacttaagaatgaaaatgat
gcacttcctccaaagaagactcagagcaatggccctgaaaaacaagaaaaagaaggagtg
atccaaaacttcaagcggaccttatcaaagaaagaaaaaaaagaaaaaaagaggcgagaa
aaagaagcacagcaacaaactttagacaatcatgggccatttcatggagatgatattgaa
aactctcgtcttgcagcagaagtctacaaagatatgcctgagaccagtttcactcgaaca
atatccaacccagaagtggtaatgaaacggcggagacaacagaagctagaaaaaagaatg
caagaatttcggagttctgatggcaggccagattcaggtggaacactaagaatttatgca
gatagtttgaaaccaaatataccctacaagacaatcctactgtctactacagatactgca
gattttgcagttattgaggcgctggagaagtatagcctagaaaaggaaaatcccaaggat
tattgcattgctcgtgttatgcttcctcctggtgctcaacattctgatgatagcggtgct
aaagaatctatccttgatgatgacgagtgtccacttcaaatattcagggaatggccaagt
gataaaggaatattagtctttcagttaaaaagacggccacctgattatatcccaaagaag
ctgaagaagcaagttgatgtaaaactattaaaaggaaaggaaagaattgatagatctggt
tatggctcttctcttccaccagagaaactaccttacctggttgaactaagtccagatggt
tctgactccagagataaaccaaagctctatcgtttgcaactaagtgtgacagaagttggt
acagaaaaatttgatgacaactccattcagttatttggtccaggaattcagtcacatcac
tgtgaccttactaacatggatggagttgttacagtgactcccagaagcattgatgctgaa
acttacgtagaaggtcaacggatctctgagaccactatgctgcaaagtggtatgaaagtt
cagtttgggacctctcatgtatttaaatttgtggaccccattcaagatcatattcctaaa
ggacgtctagatgcaggtcacatggtcaaaaattcacgtctcaaatctggaggtgtacaa
gaaactacttttgatttggaaggagacatccaaagtgtaacaggattatctacaagcaag
cagagcatcaatagattggactgtgacagaatgtcaacttctagcacagctgaacgaagc
atggtgaaaccaatgatcagaatagaacagcaagattatcacaagcaggatggcagactt
caggatggtccagaattgatactacctgcaagtgttgaattcagagaaaactcggaggat
gcttttttgtctgccatcatcaattacaccaatagctcaacagttcattttaagctatcg
cctacttatgttctgtacatgacatgtcggtatgtattatcaagccagtacagacctgac
atcagtcccgctgaacgaactcacaaagtcattgcgatagtcaacaagatggtgaaaatg
atggaaggagttatacaagaggtagaccaggttgatcagaaacagaagaatattgctggg
gcacttgctttttggatggcaaatgcatctgagttgctaaactttattaagcaggatcga
gacttaagccgaatcacattagatgcacaagatgttttggcacacctagttcagatggca
tttaaatatttggtccactgtcttcagtcagagcttaataactacatgcctgcattcctt
gatgatccagaagagaataattctcaaagacctaaaatagatgatgtcttgcatacatta
actggcgccatgtccctgttgcgacgatgtagagtgaatgcagcactgacaatacagctc
ttctcccagctatttcattttatcaacatgtggctttttaacagattggttactgatcca
gattcaggactttgttcacattactggggagctattattcgtcaacagttgggtcatata
gaagcctgggcagaaaaacagggtttggaactggctgctgattgtcatctcagtcggata
gtacaagcaactacattacttactatggataagtattctcctgaagacattcctaatatt
aatagtacctgttttaaactcaattctttacaactgcatgcattgctacaaaactatcac
tgtgccccagatgagccatttatcccaccagaactaatagaaaatgtggtagctgttgca
gaaaatactgctgacgaactagctcgtagtgatggtagagaggtacagttagaagaggac
cctgatcttcagcttccttttcttctcccagaagatggttactcatgtgatgttgtccga
aacattccaaatggattacaggaatttttagatccactctgccaaagagctttttgcagg
ttaacacctcatccacgctcaccaggaacttggacaatatattttgaaggtgcagattat
gagagccatctgttacaagacaatgcagatttggctcagccactgaggaaagaacctgaa
ataattactgtaacactaaagaaacaaaacgggatgggactaagcatagttgctgctaag
ggtgctggtcaagataaacttggcatctatgtcaaatctgtggtaaaaggtggtgctgca
gatgtggatggtcgattggctgcaggggatcagttgcttagtgtggatgggcgcagtttg
gttggactttctcaagaaagagctgcagaactgatgacaagaacaggaacagtagtcaca
ctagaagtggcaaaacaaggagcaatttaccatggtttagcaacactgttaaatcaacca
tctccaatgatgcaaagagtttcagatcgtcgtggctcaggtaaacctcgaccaaagagt
gaaggttttgagctatataacaattctgctcagaatggatcacctgaaagccctcagctg
ccttggacagaatataatgaaccaaagaaattaccaggggatgatagactgctgaagaat
cgagctgatcaccgatctagtcccaatgtagcaaatcagcctccaagtcctgggaccaaa
aaggcttatactggaggaactacaaataagataacttcagtgtctaccggaaatctttgc
acagaggaacaggtactaccagctagacctgaagcatatccaattccaacacaaacttat
accagagagtatttcacattcccagcctccaggtctcaggatcgaatgggtcccgttcag
aatcaatgggcaagttatgaagaaaagccccaaattcccgctgaaagtaatcactatatc
aataattcaaatcagcgtgtaacacgttctcaagaggaactacgggataataacatttat
caggcagaaaggaatcaattagaagttgccatgcaaaaagatatggaatatattgataga
aaatcagatagcgatccatggatgaattcttctgttgactctagcacatcaagccaggag
catctaaacagttcctctaaatgtatgccctctggatcttctttaaccaaaagtggacct
ggtcgctggaaaacacctataattactcaaccaatgttgctggcagtttctcagtccaca
aggacagacctacctccccctccccctcccccaccaatgcactatgcagctgactttgac
ggactgcaaatggatttacctctcccaccaccacctccacctgcaaatcagttggggtca
cagtcatctcaggttgctgctgctgcagagcgcaaaaagagagaagaacatcagagatgg
tatgaaaaggaaaaagcacgcttggaggaagaacgagatagaaaacgtcgagagcaagaa
agaaaactggggcaaatgcgtgctcagccactaatgccagctcaatcattgcttcctcct
cttcagcaggtgaaaccagagaagccttcaacattgcagaggtctcatgagacggttatt
agagaattgcagccccaacaacaaccccgaaccattgaacgaagagatctccaatatatc
accataagtaaagaagagctgtcctctagtgatagtctgtctcctgatccctggaaaaga
gatgctaaagagaagctggagaagcagcagcagatgcatattgtggatatgctaagcaaa
gagattcaagaacttcaaagtaagccagatcgaacaggtgaagaaaatgatcgcctgcgc
aagctcatgctggagtggcagttccagaaacgacttcaagagtcaaagcaaaaagatgag
gatgaagatgaggaagaagacgatgacattgatactatgctgattatgcaacgactagaa
gctgagagaagagtgaggttacaggatgaggagcgcagacggcagcagcaattggaggaa
atgcgcaaacgggaagcagaagatagggccaggcaagaagaagagcgtcgtcgccaagag
gaggagcggacaaagcgagaggctgagcaaaagaggcgacaggaagaagaatattataat
cgcttggaagcagagaggcgccgccagcatgatgaagcagaacggcgattgctggagcct
gatgaccctggtctgtacagacctccgcttccacgggaatatgaattcccctccccaccc
ctttcatctaatgctcctcctcccccacctcaacgaaacacttcttacctcaaaactcag
gtcctctctcctgacacgatatatactgccaagtttgttgcatacaatgatgaggaggag
gaggactcctgtctagcaacaggtcaggataagtacaccagtacaagaaagtcttgcggt
gaccttcctcctgtcccccctaagccacagcagccctcccgccagccacgcccagtctca
gatggcctctgtctgtccaactcataccagccctccgctgtcaatgccaacagtactgct
aacaaaatgagccaaccccctcccccaccacacaagccaagtttcatcaatcccagcacc
acaaaaggctcaaactacactggatctactggagcacttgcaggttcacaggaatcttat
tcagacccaagagagaagaaattgaaaagtcaagatacagatatacctggtgcaccagag
aatttgactttccgggagcgacaaagactcttttcccagggtcaagatgtgtctaacaaa
gtaaaggcatctaggaaattaacagaattggaaaatgaattaaatacaaagtag
DBGET
integrated database retrieval system
