Ahaetulla prasina (Asian vine snake): 131190641 Help Entry 131190641         CDS       T09329                                  Symbol COL2A1 Name (RefSeq) collagen alpha-1(II) chain   KO K19719   collagen type II alpha Organism apri  Ahaetulla prasina (Asian vine snake) Pathway apri04510   Focal adhesion apri04512   ECM-receptor interaction apri04518   Integrin signaling Brite KEGG Orthology (KO) [BR:apri00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     131190641 (COL2A1)    04518 Integrin signaling     131190641 (COL2A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     131190641 (COL2A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:apri00536]     131190641 (COL2A1) Glycosaminoglycan binding proteins [BR:apri00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    131190641 (COL2A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI VWC VWC2L_2nd Motif Other DBs NCBI-GeneID:  131190641 NCBI-ProteinID:  XP_058023968 LinkDB All DBs Position 2:165217286..165320342 Genome browser AA seq 1492 aa AA seqDB search MFSFLDSRTLVLLAATQVILLAVVNCQNEDIQEAGSCVQDGQRYSDKDVWKPEPCQICVC DTGTVLCDDILCEEMRDCLRPEIPFGECCPICPTDQPTASGQPGPKGQKGEPGDIKDVVG PRGPPGPQGPSGEQGPRGERGDKGEKGVPGPRGRDGEPGTPGNPGPAGPPGPPGPHGLGG NFAAQMAGGFDEKAGGGGAQMGVMQGPMGPMGPRGPPGPSGSPGPQGFQGSPGEPGEPGA GGPMGPRGPPGLPGKPGDDGEAGKPGKSGERGLPGPQGARGFPGTPGLPGVKGHRGYPGL DGSKGEAGAPGAKGEAGSSGENGSPGPMGPRGLPGERGRPGPSGAAGARGNDGLPGPAGP PGPVGPSGGPGFPGAPGAKGEAGPTGARGPEGAQGSRGESGSPGSPGPAGPPGNPGNDGI PGAKGSAGGPGIAGAPGFPGPRGPPGPQGATGPLGPKGQAGEPGIAGFKGEQGPKGEPGP GGPQGPPGPAGEEGKRGGRGEPGAAGPTGPPGERGSPGNRGFPGQDGLAGPKGAPGERGP PGLGGPKGGPGDPGRPGEPGLPGARGLTGRPGDAGAQGKVGPSGAPGEDGRPGPPGPQGA RGQPGVMGFPGPKGANGEAGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGAVGERGE QGTPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLIGPRGERGFPGERGPAGAQGL AGGRGLPGTPGTDGPKGAAGPAGPPGAQGPPGLQGMPGERGAGGIPGPKGDRGDAGEKGP EGAPGKDGSRGLSGPIGPTGPAGPSGEKGESGPPGPSGAAGTRGAPGERGETGPPGPAGF AGPPGADGQPGAKGEQGGTGQKGDAGSPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGA TGFPGAAGRVGPPGPNGNPGSPGPPGASGKDGPKGARGDAGPVGRTGDPGLQGPPGPAGE KGESGEDGPPGADGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGSPGGPGD RGPPGPVGPPGLTGPSGEPGREGNPGSDGPPGRDGSSGPKGERGETGPVGSPGAPGSPGA PGPVGPTGKQGDRGETGPQGPIGPTGLAGARGLPGIQGPRGDKGEAGEAGERGLKGHRGF TGLQGLPGPPGPSGDQGTSGPAGPSGPRGPPGPVGPSGKDGSNGMPGPIGPPGPRGRSGE TGPAGPPGNPGPPGPPGPPGAGIDMSAFAGLGQTEKGPDPMRYMRSDQAFSNLRQHDVEV DATLKSLNNQIESIRNPEGSKKNPARTCRDLKLCHPDWKSGDYWIDPNQGCTLDAIKVFC NMETGESCVYPKPKSIPRKNWWTSKNKEKKHIWFGESINGGFHFSYGDDNLAPNTANIQM TFLRLLSSEGSQNLTYHCKNSIAYMDAASGNLKKALLIQGSNDVEMRAEGNSRFTYTALQ DGCTKHTGKWGKTIIEYRSQKTSRLPIIDIAPMDIGGADQEFGVDIGPVCFL NT seq 4479 nt NT seq  +upstreamnt  +downstreamnt atgttcagctttctggattcaaggactctagtgctcctggcagctactcaagtaatttta ttagcagttgtcaattgtcagaatgaggatatacaggaggcaggcagctgtgtacaggat gggcagagatatagtgataaagatgtgtggaaacccgaaccgtgccagatctgtgtttgt gacactggcactgtcctctgcgatgatattctctgcgaagaaatgagagactgtctcagg cctgagatacccttcggagaatgttgccctatatgtccaactgatcagcccaccgccagt gggcaacctggtcccaagggtcaaaagggagaacctggtgatatcaaggatgttgtagga ccgagaggccctcctggaccacagggaccttcaggtgaacaaggaccaaggggagaacgt ggagataaaggagaaaagggtgttccgggtccacgtggcagagatggtgaacctggtaca cctggcaatccagggcccgctggacccccaggacctccaggcccccatggccttggtgga aactttgctgctcagatggctggtggatttgatgagaaagcaggcggtgggggtgctcag atgggagtgatgcaaggacctatgggaccaatgggaccgcggggtcctccaggaccatca ggatctcctggccctcaaggatttcaaggcagccctggagaacccggagaacctggcgct gggggtccaatgggtccccgtgggccacctggattacccggaaaaccaggagatgatggt gaagctggcaaacctggcaaatcaggagagcgtggcttacctggacctcagggtgctcga ggtttccctgggaccccaggtcttcctggtgtcaaaggtcacagaggatatcctggttta gatggctctaaaggtgaagctggtgctccaggtgctaagggtgaagctggatcttctggg gagaatggttctcctggtcctatgggtccccgtggccttccaggtgaaagaggtcgtcct ggcccctctggtgctgctggtgctcgtggtaatgatggtctccctggtccagctggtcca ccgggacctgttggcccttctggtggaccagggtttccaggagctccaggtgcaaagggt gaagctggtcccactggtgctcgtggccctgagggtgcccaaggctctcgaggtgaatct ggatctcctggttctccgggacctgcaggacctccaggcaaccctggaaatgatgggatc cctggtgccaaaggatcagcaggtggtcctggcattgctggtgctcctggttttcctggc ccacgtggaccacctgggccacaaggtgcaacaggacctttgggtcccaaaggtcaggcg ggagagcctggaattgcaggcttcaaaggtgaacaaggccccaagggtgaacctggccct ggaggaccgcaaggaccccctggcccagctggcgaagaagggaagagaggaggtcgtggt gagccaggagctgcaggaccaactggacctcccggagagaggggttcccccggaaatcgt ggttttccaggtcaggatggattagctggtcccaaaggtgctcctggagaacgtggccct cctggccttgggggacccaaaggtggccctggagatcctggacgacctggagaacctggc ctgcctggtgctcggggcctcactggtcgccctggggatgctggtgctcaaggcaaagtt ggcccatctggtgctccgggtgaagatggacggcccggcccacctggtcctcaaggtgct cgtggtcagcctggtgtcatgggtttcccaggccccaaaggtgctaatggtgaagctggt aaagctggtgagaaggggctacctggtgctcctggactacgaggtcttcctggcaaagat ggtgagacaggagcagctggaccaccaggacctgctggggctgttggagagagaggtgaa cagggcacccctgggccatctggattccaaggacttccaggccccccaggccctccaggt gaaggtggaaaaccaggtgaccaaggtgttcctggagaagctggtgctcctggtcttatt ggtcccagaggtgaacgtggcttcccaggagaacgtggacctgcaggtgcccaaggcttg gctggtggtcgagggcttcccggtacccctggtactgatggacccaagggtgcagctggt cctgctgggcctcctggagcccaaggccccccaggtctgcagggaatgcctggtgagaga ggagctggaggtattcctggaccaaagggagacaggggtgatgctggtgagaaaggccca gaaggtgctcctggcaaagatggcagccgaggcttaagtggtcccattggtcctaccggt cctgctggccctagtggagagaagggtgaatcaggtccccctggcccaagtggagctgct ggtactcggggtgcccctggtgagcgtggagaaaccggacctcctggccccgctgggttt gctggcccccctggtgctgatggccagcctggtgctaaaggtgagcaaggtggaactggc cagaaaggagatgctggatcccctggtccacaagggccatctggtgctcccggtccacag ggtccaactggtgtgacaggtccaaaaggagctcgtggtgcacaaggacccccaggcgct actggattccctggtgcagcaggacgggttggaccacctggtcccaatggtaaccctggt tccccaggcccacctggtgcttctggaaaagacggtcccaagggtgcccgtggtgacgca gggccagttggacgtactggcgatccaggtttgcaaggccctcctggtcctgcaggcgag aagggagaatctggagaagatggccctcctggtgcagatggcccacctggacctcagggt ttggcaggacagagaggaatagttggtcttcccggtcagcgaggtgaaagaggatttcct ggtctgcctgggccttctggtgagcctggtaaacaaggatctcctggaggtccaggagat agaggcccacctggcccagttggtccacctggtttgactggtccctctggtgaacctggc cgtgagggtaatcctggttcagatggtcctccaggcagagatggttcctcgggaccgaag ggggaacgtggtgagaccggtcctgttggaagtcctggtgctcctggctcacctggtgct ccaggtcctgttggtccaactggcaaacaaggagatagaggtgaaacaggtcctcaaggt cccattggccctactggccttgcaggagcaaggggcttacctggtatacaaggtcctcgt ggcgacaaaggtgaagctggagaggcaggagaacgaggtctgaagggtcaccgaggattc actggcctgcagggtctccctgggcctcctggtccttctggagatcaaggtacatctggt cccgccggtccctctggtcccagaggtcccccaggccctgttggtccctctggaaaagat ggctctaatggaatgcctgggcccattggccctcctggccctcgtggtcgtagtggagaa actggtccagctggtcctcctggcaaccctggccctcctggccctccgggcccacctgga gctgggattgatatgtctgcctttgctggccttggccagactgagaaaggccctgatcca atgcgctacatgagatccgatcaggctttcagcaacttgcggcaacatgatgttgaggtt gatgccaccctgaagagtctcaacaaccagattgaaagcatccgaaaccctgagggcagt aagaagaacccagctcgaacctgtcgtgacctgaaactatgccatcctgactggaagagt ggcgattattggattgaccccaaccagggctgcactttggatgccataaaggttttctgc aacatggagactggcgagtcctgtgtctatccgaagccaaagagcattcccaggaagaat tggtggacaagcaagaacaaggagaaaaagcacatctggtttggagaaagcatcaatgga ggttttcactttagctacggagatgacaacttggctcctaacactgccaacatccagatg actttcctgcgactcttgtcttctgaaggctcacaaaatcttacctaccactgcaagaac agtattgcctacatggacgcagcatccggcaaccttaagaaagctctcctgatacaggga tccaatgacgtggagatgagagccgagggcaacagcaggtttacctacactgccttgcag gatggatgtactaaacatactggcaagtgggggaagacaatcatcgagtatcgatctcag aagacttcgcgcctgcccatcattgacattgcgcctatggacattggtggcgccgatcag gaatttggtgttgacattggccccgtgtgctttttgtaa

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