KEGG   Ahaetulla prasina (Asian vine snake): 131190671
Entry
131190671         CDS       T09329                                 
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
  KO
K12881  THO complex subunit 4
Organism
apri  Ahaetulla prasina (Asian vine snake)
Pathway
apri03013  Nucleocytoplasmic transport
apri03015  mRNA surveillance pathway
apri03040  Spliceosome
apri05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:apri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131190671 (ALYREF)
  09122 Translation
   03013 Nucleocytoplasmic transport
    131190671 (ALYREF)
   03015 mRNA surveillance pathway
    131190671 (ALYREF)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    131190671 (ALYREF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:apri03019]
    131190671 (ALYREF)
   03041 Spliceosome [BR:apri03041]
    131190671 (ALYREF)
Messenger RNA biogenesis [BR:apri03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     131190671 (ALYREF)
    TREX complex
     131190671 (ALYREF)
Spliceosome [BR:apri03041]
 Complex C
  Other components
   EJC/TREX
    131190671 (ALYREF)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    131190671 (ALYREF)
SSDB
Motif
Pfam: RRM_1 FoP_duplication Btz
Other DBs
NCBI-GeneID: 131190671
NCBI-ProteinID: XP_058024011
LinkDB
Position
2:134462494..134467108
AA seq 254 aa
MGDKMDMSLDDIIKLNRSQRGGGGRAGGGRGRGRGATGRGGGGAGRGGAGRAGGGGPVRN
RAALSRGGGRNRPAPYSRPKQLPEKWQHDLFESCFGPGAGVETGGKLLVSNLDFGVSDAD
IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNCVPLDGRPMNIQLV
TSQIDTQRRPIQSVSRGGMTRNRGGSGGFGGGNRRGSRGNRGRGRGAGRSSKQQLSAEEL
DAQLDAYNARMDTS
NT seq 765 nt   +upstreamnt  +downstreamnt
atgggcgacaaaatggatatgtctttggacgacattatcaagctgaacaggagtcagcga
ggcggaggtggccgagccggcggtggtcgaggccggggaagaggagctacaggtcgagga
ggaggaggagctgggcgaggaggtgctggacgcgcaggcggaggcggccccgtccggaac
agagccgctctgtcccggggaggcggcaggaacaggcccgcgccctacagccggccaaaa
caactccctgaaaagtggcaacatgatttgttcgagagttgctttggccctggcgctggc
gtggaaacgggtggaaagctcctcgtctctaatctggattttggtgtttcggatgcagac
atacaggagctttttgcagaatttgggacactaaaaaaggcagcagtacactatgatcgt
tctggacgtagtctaggtactgcagatgttcattttgagaggaaggctgatgctctgaag
gctatgaagcaatacaattgcgttcccttggatggacgtcccatgaacattcagctggtt
acatcacagatagatacacagaggagaccaatacagagtgtaagtagaggaggcatgaca
agaaaccgtggtggctcaggtggctttggcggtggcaacagacgaggcagtcgtggcaat
agaggcagaggcagaggtgctggcaggagttccaaacagcagctctctgcagaagaattg
gatgcacagttggatgcttataatgctaggatggataccagttaa

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