Ahaetulla prasina (Asian vine snake): 131190681
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Entry
131190681 CDS
T09329
Symbol
SHOC1
Name
(RefSeq) protein shortage in chiasmata 1 ortholog
KO
K28108
shortage in chiasmata 1
Organism
apri
Ahaetulla prasina (Asian vine snake)
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
apri03036
]
131190681 (SHOC1)
Chromosome and associated proteins [BR:
apri03036
]
Eukaryotic type
Meiosis-specific proteins
Others
131190681 (SHOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
131190681
NCBI-ProteinID:
XP_058024023
LinkDB
All DBs
Position
2:210479765..210526974
Genome browser
AA seq
1458 aa
AA seq
DB search
MRNTMFSPVKFHAIDYSYEKQAKERITFQLLSIRFPFSLYQDIHYYHDGKLADNKYRRPW
TRASADSTVMNISVADIWKKSLVTEDFLEKKPVSNIAFHTPNEDVEIIPSSNPSSQFSTQ
DYMFMKLDKGELTDRYCLQLDYVPVALKQEGLYIEEELVFTNNLTQSAKCLPSLQTLLSR
LNVFQVQDPLLNFKGDSFVEEDILRECFTFKMSVTPQEKGMELNEEFCKVSLKDEEIPLF
LVKFQFCEATNSKVDMEIFTSLALKSLLQVTPEILEDENECLRITNEKLNMTIIPEMIKS
SKHYSTQEVYSSQNKDLPEFNNPISYNGELEVPLTPPCRKENRYMNSLYAHLKPEPVSPI
NKSDFITESTSNYLEGLMWQSEKYQNAMSSLFLIVPQNSVAVCQQFSITELKTKLSIHEN
SMMTGTLEDEWINLREKLTVPCVLEALSINVNDEGRLANTDIEVFSKITNFQLDKWLDDK
SSFCDSNMKIFSIPHCIATKDSCSPKKNETFSSLSLTPTSPQYSISIADNNVSTENYIKQ
TKLQNEIEKPVQIENHEVGKNNQLVSCKKVSVSENSRLRNKKSVLPEQPRKCKDDFDLLS
NFIMLRSKQVISQRKEGNSVDNQEEVFDAENEQPSIESHKSPRVPGMTAPMENQSKDNNT
LAFLKIKTSECQSQAYRILEAAAVPVLKDLIKLDMQNWRFATLNSDNTRFFLKQQEKVIS
DTLKQGSKDAKFILVFRHAAILHLLVTVRDLLLNCNLKTALEYLSKAKDNYKDFQDYDLD
IIWKQLKIVEFVVQEHKVSPKVTELQHQISKWVQNNANDQNKLCILVVDFLTSTISYLDI
FLAKQYPISRDFNFPGLHLFPSTVCFSTSAKESLPDNLGYDLLRLSIPYVFLTSEGLLNT
PEILQLLESKYNITLIERNCCEALNYFGGTEHYVVMTIDECTAIVMQNMEELNYENSSDN
IVLRLVALSLQYAACWIILYSRERLNSKYSLSAKILHHLALIYAALISFAQKSEDFEVKM
ALTPGVEETALLVRQIADHILLASKQHPQEWLNKSWLSVLPLEAEKCLLTFPCMNPLVAQ
VMLKKSSSLEWLLGASFAELQELLPEVPEKVLKNFSDITSLYILKPLTRPGTQKETMSLQ
GNINSAICSCSQLPFPEALFSRLQGHSSCTEYSECFLEEQNKNCSQNGSCGCLKSAGEFN
LVVPSITYEGDTCPFQENVRVERQLYLPFLKNVETETRINASYLTFNIGGPSHVNNETTM
PYLHCNQDTSSYIENYPLNRMTVSKVDTGKQRDISEFLKKPVYPDAKNERKIQPLAQQLN
SFHDFKHSSHVVSSRKNVLFQENSGRVLEIGRKASSSPALQSEERFWGNPPFIQAMDSSP
YNSHVGKAIASPDRFMNLGIQFTGDHTRGKGQNSLSGEQRQQDVSALEFVHLPQLKKRRL
TFEKDPRRPDGQTRLKFF
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatactatgttttcacctgtgaagttccatgcaatcgactattcttacgagaaa
caggcaaaagagagaattacctttcagttgttatcaattcgcttcccttttagtttatat
caggatatacattactatcatgatgggaaattggctgataataaatatagaagaccctgg
acaagagcttcagctgattccacagtgatgaatatttcagtagctgatatttggaaaaaa
tctctcgtcactgaagatttcttagaaaagaagcctgtttcaaatattgccttccatact
cctaatgaagatgttgaaattattccaagttcaaatccttcttctcaattcagtacacaa
gattatatgtttatgaaacttgacaagggggaactgactgatagatattgcttgcagctg
gattatgttccagttgcacttaaacaagaaggtttatatattgaagaagaacttgttttc
actaataatttgacacagtctgctaaatgtctaccttctctgcaaacactcttgagtcga
ctaaatgttttccaagtgcaagatccccttttaaattttaaaggtgacagtttcgtggaa
gaggacatattgagggaatgctttactttcaaaatgagtgtgacacctcaagaaaaaggg
atggaattaaatgaagaattctgcaaagtttctttaaaggatgaagagattcctttattt
cttgttaagtttcaattctgtgaagcaacaaactcaaaggtggatatggagattttcaca
agtttagcccttaaatctttattacaagtaactccagaaattttagaagatgaaaatgaa
tgtctcagaataactaatgaaaaacttaacatgacaattataccggagatgataaagagt
tcaaaacattactctactcaagaagtttattctagtcagaacaaagatctaccagaattc
aacaatccaataagttacaatggagaacttgaggtgccattaactcctccatgtaggaaa
gaaaataggtacatgaattcattgtatgcccacttaaaaccagaacctgtttctcccatt
aataaaagtgatttcattacagaatctacttcaaactatttggaaggacttatgtggcag
tcagagaaataccagaatgctatgtcttcacttttcctaatagtacctcagaattctgtt
gctgtatgtcaacagttttcaatcacagaactgaagacaaagttgtctatacatgaaaat
tctatgatgactggaaccttggaagatgagtggattaatttaagagaaaaactgactgtg
ccatgtgtcttagaagcactgagcataaatgtaaatgatgaaggaagacttgctaataca
gatattgaagttttttccaaaattactaatttccaattagataaatggcttgatgacaaa
agttccttctgtgacagcaacatgaagatttttagtatccctcactgtattgcgaccaag
gattcttgttctcctaaaaaaaatgagacattttcttcactatctctgacacctacttca
ccacagtatagtatctctatagcagacaacaatgtatctactgaaaattatatcaaacaa
accaaattacaaaatgaaattgaaaagccagtgcagattgaaaaccatgaagtaggaaaa
aacaatcaactagtcagttgcaagaaagtctctgtctcagaaaatagtagattaagaaat
aaaaagtcagttctacctgaacagcctagaaaatgtaaagatgactttgatcttttgagt
aattttatcatgctgagatctaaacaggtgatcagccaaagaaaagaagggaatagtgtg
gataatcaagaagaagtatttgatgccgagaacgaacaaccttcaattgaaagccacaaa
agtcctagggttcctggcatgacagctcctatggaaaaccaatcaaaagacaataataca
ttagctttcctcaaaattaaaacatcagagtgtcaatctcaagcatatcgtatcctggaa
gctgcagcggttccagttttgaaagaccttataaagcttgacatgcagaattggaggttt
gccacacttaattctgataacaccagattttttttgaaacaacaagagaaagtgatcagt
gacacattgaaacaaggtagcaaagatgcaaaatttattttggtattcagacatgctgct
attcttcatttgctggttacagttcgtgatcttttattaaactgtaacctgaaaactgca
ttagaatatctgtccaaggcaaaagacaattataaagatttccaagactatgacctggat
attatttggaaacagctgaaaattgtggaatttgttgtgcaggagcacaaagtcagtccc
aaagtgacagaattacagcatcaaatttctaagtgggtacagaataatgcaaatgatcag
aataagctctgtatcctggttgtagattttcttacatctaccatttcctatcttgatatt
ttcctagctaaacagtatcctatctctagagattttaattttccaggtcttcatctcttc
ccatccaccgtctgtttctcaacttcagcaaaagagtctttgccagataatcttggatat
gatcttctgaggttgtcaattccttatgttttcttgacatctgaaggacttctcaatacc
ccagaaatccttcagttactagaatccaagtataatattactttaattgaaagaaactgc
tgtgaggccttaaactattttggaggcacagaacattatgtggtaatgactatagatgaa
tgcacagctattgttatgcagaatatggaagaactcaattatgaaaactcctctgataat
attgtcttaagactggtggcactatcactccagtatgctgcctgttggattattttatac
tcccgagaaagattaaattctaaatatagcctatctgcaaaaattctgcatcatcttgct
ttgatttatgcagcattgatttcttttgctcagaagtcagaagactttgaagtgaagatg
gcccttacaccaggagttgaagaaacagcacttttggttcgccagatagctgaccatata
ttattggcatctaaacaacatcctcaggagtggctaaacaagtcatggctttctgtcctg
ccattagaagcagagaaatgcttgcttacatttccatgcatgaatccactagttgctcaa
gtcatgctaaagaaaagttcttcattggaatggctccttggagcatcttttgctgagctt
caggaacttctgcctgaggtgccagaaaaggttttgaagaattttagtgatatcacttca
ttatacatcctcaagccactaacaagaccaggaacacaaaaagaaaccatgtctcttcaa
ggaaatattaattctgccatctgctcttgttctcaacttccatttcctgaggctttgttc
tccagattgcaaggacatagttcctgtactgagtattcagaatgctttcttgaagaacag
aacaaaaactgttcccagaatggatcttgtggttgtctgaaatcagctggagaatttaac
ttagttgtaccttcaataacgtatgaaggagacacctgtccctttcaggagaatgtaagg
gtagagaggcaactttatctcccatttctgaaaaatgtggaaacagaaacaagaataaat
gcatcatatttaacatttaacattgggggaccttcccatgtcaataatgaaaccacaatg
ccatatttgcactgtaaccaggacactagctcttatattgagaactatccactgaataga
atgactgtatcaaaagtggacacaggcaaacagagagatatctctgagttcttgaagaag
cctgtctatcctgatgctaaaaatgaacgaaaaattcaacctctcgcgcaacaactaaat
tctttccatgatttcaagcattcttctcatgtcgtttctagtcgaaaaaatgttctgttc
caggaaaactcaggccgtgttttagaaataggaagaaaagcaagcagcagtcctgcatta
caatctgaggaaagattttggggtaaccccccattcatacaagcaatggattcttccccc
tacaattcacatgtaggcaaagctatagccagtccagataggttcatgaatttgggcatt
cagtttactggagatcataccagggggaaaggacagaattcattatcaggtgaacaaaga
caacaagatgtttcagctttagaatttgtgcatttaccacagcttaaaaaaaggcgtcta
acttttgaaaaagatcctaggagacctgatggccaaacacgtctcaaatttttttag
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