Ahaetulla prasina (Asian vine snake): 131190878
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Entry
131190878 CDS
T09329
Symbol
PNLDC1
Name
(RefSeq) poly(A)-specific ribonuclease PNLDC1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131190878 (PNLDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apri03019
]
131190878 (PNLDC1)
Enzymes [BR:
apri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
131190878 (PNLDC1)
Messenger RNA biogenesis [BR:
apri03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
131190878 (PNLDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
Receptor_2B4
Motif
Other DBs
NCBI-GeneID:
131190878
NCBI-ProteinID:
XP_058024347
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All DBs
Position
1:complement(92066248..92102069)
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AA seq
564 aa
AA seq
DB search
MRREGGVANEAGSAPCSLRGKAGSKGRSLRVHRRESRQGGMDVGAAEFPKMLPRLEELVL
GCDFVGLDMEFTGLHSDNQPSLFDLPADWYRKGRQNVQRFTVNQLGLSIFYKGMSNEYIA
HSYNFFLFPATFGRMDSEFSCQASSIQFLSHFDFDYNKFLKDGIPYMNETQEKKLQHLLS
GNWMVQSFDKVKVKKAIDQVTCWIASAEEEDSMVLHDIYGFQVIELQLILRKAFPDIWTI
PLENEKLMVKKMNPQYRWVLENTAFDPCQREQILYSARGFTNIFQTLVKAKKPLVGHNML
MDLLYLHEKFYKPLPEKYEEFKDNIHFLFPVLLDTKNIAKATWKEFQFPQVSYLLELYET
LCSVVNPTDQLCPEIFHSDDCLRYAINKCPHEAAYDAFLCGAVLLKIAHLLLCRKTGHQT
AAPTFSQYLDVLAAYVNEVNLIRGGIQKINFSGADDLTSRLPLLLVTVKGWHGVTEEQIH
QELRSFCRFDVRQLRMNQFLLLSNHFKDIRIVMKVYKGHPNLQISVYHRWKHSPRVTSFL
QICGIVASWSLLAFLLGGSYSCRA
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgcggagggagggcggagtagcaaatgaggctggttccgccccctgcagcctccgagga
aaagcgggaagcaaaggcaggagtttacgggtgcaccggagagaaagcaggcagggcggg
atggatgtgggggccgcagagtttccaaaaatgttgcctcggttagaggagcttgtcctg
ggctgcgactttgttggccttgatatggaattcacaggtttgcattctgacaatcagcct
agtctctttgatttacctgctgactggtatcggaaaggcagacaaaatgttcagcggttt
acagtgaatcaacttggtttgtccatattttacaaggggatgtcaaatgagtatatcgcg
cattcgtataacttcttcctattccctgccacatttggccgaatggattccgagttctcc
tgtcaagcatctagtattcaattcctgtctcattttgactttgactataataagtttctt
aaagatggaatcccttatatgaatgaaacacaagagaagaagcttcagcatctgttatct
ggtaattggatggtccaaagttttgataaagtcaaggtgaaaaaagcgattgatcaagta
acttgctggatagcctcagcagaagaggaagattctatggttctgcatgatatatatggc
tttcaagtgatcgaactacaactcattctaagaaaagcttttccagatatttggactatt
cctttggaaaatgaaaaattgatggtgaaaaagatgaatccacaataccgctgggtcctg
gaaaacactgcttttgatccatgtcaaagagaacaaattctttattccgcaaggggcttc
accaatatcttccagacacttgtgaaagctaagaagccactggtgggacacaacatgctg
atggatcttctgtatctgcacgagaaattttacaaaccccttcctgaaaagtatgaggaa
ttcaaagataacattcacttcctgtttcctgttcttttggatacgaagaacattgccaaa
gccacttggaaggaatttcaatttcctcaagtttcttaccttttggagttgtatgaaacg
ctgtgcagtgttgtgaatccaacagaccagctttgtccagagatctttcactcagatgat
tgtctcagatacgctataaataagtgtcctcatgaggccgcctatgatgcattcctctgt
ggagcagttcttcttaaaatagctcacttgctcctttgcagaaaaacaggtcatcaaaca
gcagcacccactttttctcagtatcttgatgtattagctgcgtatgtgaatgaggtgaac
ttgattcgaggtggaattcagaaaattaatttttctggtgcagatgacttaacatcacgc
ctacccctcctactagtcactgtgaaggggtggcatggggtaactgaagagcagattcat
caagagttgaggagtttctgcaggtttgatgtccgtcagctaagaatgaaccagtttctc
ctgctctccaatcattttaaagacatcaggatagttatgaaagtatataaaggccatccc
aacctgcagatttccgtgtatcaccgttggaagcattctccacgagtgactagcttctta
caaatatgtggcattgtggcttcttggtctctgctggctttcttgcttggaggctcttat
agttgtcgtgcataa
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