Ahaetulla prasina (Asian vine snake): 131190907
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Entry
131190907 CDS
T09329
Symbol
MBD4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
131190907 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
apri03036
]
131190907 (MBD4)
03400 DNA repair and recombination proteins [BR:
apri03400
]
131190907 (MBD4)
Chromosome and associated proteins [BR:
apri03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
131190907 (MBD4)
DNA repair and recombination proteins [BR:
apri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
131190907 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
DUF6346
Motif
Other DBs
NCBI-GeneID:
131190907
NCBI-ProteinID:
XP_058024426
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All DBs
Position
2:complement(54478544..54488794)
Genome browser
AA seq
431 aa
AA seq
DB search
MAVQRNTRLRTKRSSTRKASTEIESCISRSPVSLSGLGKSEGDCKSSLENNLELLSDTRE
PEIPATCLQDGPNTRDISKDCFLKSDKNGTIQRKIQVRKSKKSSEIRNITHGQNKIQRLS
ACKEQAQSSKRAICKNKMCVLNSDSSENKVCRRSSRKRKICFKDELLFEPKTEQNDKQIE
PFLEHQTSTEISKCTERSCSRITAAANKKLSVVEMQRNVMASESASEQRASTMDVTVFQM
CEEKPFTSTKKSRTQRTQVERWKTSPYFSRKLIKEAPSPPRRKAFRKWTPPRSPFNLVQE
TLFHDPWKLLIATIFLNKTSGKMAIPVLWEFFKKYPSPNVARTTNWKEMSELLKPLGLYK
LRAKTIVKFSDEYLVKQWKYPIELHGIGKYGNDSYRIFCVNEWKEVQPQDHKLNIYHSWL
WENHDKLNLNY
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggctgttcagaggaatacacggttaagaaccaaaagatcttctaccagaaaggcaagc
acagaaattgagagttgcatttctaggagtcccgtttcactctctggattagggaaaagt
gaaggagattgtaaatcttctctagaaaataacttggaacttctatccgacactagagaa
ccagaaattcctgctacctgtttgcaggatgggcctaataccagagatatttctaaggac
tgttttttgaaaagtgataaaaatggtactattcaaaggaagattcaagttagaaaatct
aaaaagtcttctgaaataaggaatatcactcatggccaaaacaaaatacagagactatca
gcgtgtaaagaacaggcacaaagcagtaaacgtgccatatgtaagaacaaaatgtgtgta
cttaatagtgattccagtgaaaacaaagtatgccgaagaagttcaaggaaaagaaaaata
tgttttaaggatgaactgttgtttgaaccaaaaacagagcagaacgataaacagattgaa
cctttcttagaacaccaaacaagcacagaaatatcaaaatgtactgagcgttcttgcagc
agaatcactgcagctgctaataaaaagctttcagtagtggaaatgcaaagaaatgtgatg
gcttcagagagtgcaagtgaacagagggcttccactatggatgttactgttttccagatg
tgcgaagagaaaccttttacatcaaccaaaaagagccgtactcaaagaacccaagtggaa
agatggaaaaccagtccatatttttccagaaaattaatcaaagaagctccaagtccacca
agaaggaaagcttttaggaaatggactccacctcgttctccttttaatctggttcaggaa
acactgtttcatgatccatggaaacttctgattgcaactatatttttgaacaaaacctca
ggaaagatggctatccctgtgctgtgggaattttttaagaaatatccttcaccaaatgta
gcaagaactaccaactggaaagaaatgtcagaattgcttaaacctcttggcctatataaa
ctcagagcaaagaccattgttaaattttcagatgaatatttggttaagcagtggaaatat
ccaattgaattacatggaattggaaaatatggaaatgattcttacagaattttctgtgtg
aatgaatggaaagaggtacagccacaagaccacaaattgaacatttatcattcctggctg
tgggaaaatcatgacaaattaaatcttaattattag
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