Ahaetulla prasina (Asian vine snake): 131191159
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Entry
131191159 CDS
T09329
Symbol
SCAF8
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
apri
Ahaetulla prasina (Asian vine snake)
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apri03021
]
131191159 (SCAF8)
03041 Spliceosome [BR:
apri03041
]
131191159 (SCAF8)
Transcription machinery [BR:
apri03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
131191159 (SCAF8)
Spliceosome [BR:
apri03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
131191159 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
CotJB
Motif
Other DBs
NCBI-GeneID:
131191159
NCBI-ProteinID:
XP_058024988
LinkDB
All DBs
Position
1:complement(94661115..94756005)
Genome browser
AA seq
1350 aa
AA seq
DB search
MKEADRRHSSGEQPPFGAVLKAFSPPPHNMEAVKAFNSELYSLNDYKPPISKAKMTQITK
AAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFAPRFSNN
IISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMAAGIPPPVVTPVLPGTT
ATLSNNTPGTPVTPATPANIIQSLPDPWVSQITNTDTLAAVAQILQSPQGQQLQQLIQTL
QMQQQKPQPSLLQALDAGLVVQLQALTAQLTAAAAAANTLNPLEQSVSFNKKLIDRFGDF
GEEADLNEESKKETPTSQLPLVSESVNNSLFHQLAEQLQQQNLEHLRQQLLDQQPPKVSP
EETQEDNFGSEHSASPSQDSSHQQFLEVETKLDNSMDVQQQDMDIDEAQEIIEQEVFEQE
EKKPAVLSRSRTRSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSSER
RAREREKERQKKGLPPVRSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIP
PRGCAYVCMVHRQDAYRALQKLSSGSYKIGSKIIKIAWALNKGVKTEYKQFWDVDLGVSY
IPWEKVKLDDLDGFAEGGMIDQETVNSDWETTRTSETVKENVQITQSATVEKTTVVTTQT
ETYTQSVAMLQIPVAPTVPAVNLVPPAFPVTMSVPPPGYSGIPPPPFLRASFNPSQPPPG
FMPPPVPPPVPPPVVPASLVQSSMTIAQESMKDFSSLVLPGGTVSSSLTTPTLSAGSVFS
SLSKNSSELDEKGSLRADLQTSSTEKRTVQDDVSSSSGLTEGIQPPGITTSSGHVGGIQP
PHVSSSAGLVQPVNVSSSSGLLTRVQPPTASNSSGLITGVQAPSVSSSSGLLTGLQPINV
SSSSNLLMGIQPPIVSNNTGRLSGIQPPIVSSSSGLLTALQPPIVSNSSAILGLPPPIVS
SSSGLLGLPPPNISGGSGLLGLQPPTGMQNLSHLTLASQRLPGIPLVEIRSGLIPQPPGP
RFPLLQPGMPPQRTIPPPAILDPSLPPPRVPFLPGDIFTQTERSFATSSRQNMDISNPDK
RLPVGEDSIQQEGDRDYRFPPVESRDRTSSVDIRDSIGRPPLDPREGLGRPPIDGREHLM
RPHIDLRENFGRPGMDNLRREHFAFNSEKHWGQRGDYDEREHQAFPVYGGLKGFQDFRER
YRQTNYRFETRSGPIWNRGLEQDAHRDFDDRRRPWERQRDRDDRDFNFGREINGNRFGRE
RTQNNWLHPPHLRAFEYFEGGASQQKVDSVPQVNGENTETENQPSAVQVQDELELYEKLA
TSNETKKEKSDTEAELENEPVVESTETEGT
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagccgaccgccgtcactccagcggagaacaaccccctttcggcgcggttcta
aaggctttttcccctccgccacacaacatggaggccgtgaaagcttttaacagcgagctt
tactcactgaatgattacaagcctcctatttcaaaggctaaaatgacacagattactaag
gcagcaatcaaggccataaagttctacaaacatgttgtacagagtgttgagaaattcatt
caaaagtgtaaaccagaatacaaggtgcctggattatatgtcattgactcaattgtacgg
cagtctcggcatcagtttggacaagaaaaggatgtctttgctcctcggtttagcaataac
atcattagcactttccagaatttatatcgttgccctggggatgataagagtaaaattgtt
agagtgctcaatttgtggcagaagaacaatgtgttcaaaagtgaaattatccagcctcta
ttggatatggcagcaggaattcctcctccagttgtgactcctgttttgccaggaacaact
gcaactttgagtaacaatacaccaggaactccagtaactcctgctactccagccaatata
atccaaagtttacctgatccatgggtatctcagataactaatacagatacacttgctgct
gtagcacagatcctgcaaagtccacaaggccaacagcttcagcagttaatacagacgttg
cagatgcaacaacaaaaaccacaaccatcattgcttcaagcactggatgctggtcttgtt
gttcaactacaggctctcactgctcaacttacggccgctgctgccgctgccaatacactc
aatccactagaacagagtgtctcttttaacaagaagctgatagataggtttggcgatttt
ggagaagaagctgatttgaatgaagagtccaaaaaggaaaccccaacttctcaattgccc
cttgtatctgaatccgtgaacaactcactttttcatcagctagctgaacaactacagcaa
caaaatttagaacatcttcggcaacagcttctagatcagcagccaccaaaggtaagccct
gaggaaactcaagaagacaattttggttctgagcattcagcatcaccttcacaagatagc
agtcaccaacagtttttagaagtggaaacaaagcttgacaattcaatggatgttcaacag
caggacatggatatagatgaagcccaggagattatagaacaagaagtctttgagcaagaa
gaaaagaaaccagcagttctttcaagatcacgaacacgttcaagatcacgttcaaggtca
ccaagaaaaagaaggtcaagatcacggtctggttctcgaaagcgtaaacacagaaagcgt
tcacgttctagatcaagagaaagaaagaggaagtcatcaaggtcatactcaagtgaaaga
agagctagagaaagggaaaaagaaagacagaaaaaagggttacctcctgtccgatcaaaa
acactaagtgtctgcagtaccacgctttgggttggtcaagtggacaagaaagccacacag
caagatttaaccaatttatttgaagaatttggacaaatagaatctataaatatgatccct
cccagaggttgtgcatatgtctgtatggttcataggcaagatgcttatcgtgctcttcag
aaactaagctctggatcctacaaaattggatctaaaattattaagattgcatgggcttta
aacaaaggggtgaaaactgaatacaaacagttttgggatgtggatcttggagtatcatat
ataccctgggaaaaagttaagctggatgatttagatggctttgcagaaggaggcatgatt
gaccaggaaacagtaaatagtgactgggaaactacaaggacttcagagactgtaaaagag
aatgtgcagataacccagagtgcaactgtggagaaaaccacagttgtcacaacacagaca
gaaacttacacacagtctgtcgctatgttacagattcctgtagctccaactgtgccagct
gttaatttagttccacctgcgtttcctgttacaatgtctgtccctccacctggttacagt
ggaattcctccgccaccattcttgagagcaagctttaatccttcacaaccgcctcctggt
ttcatgcctccacctgttccaccacctgttccgccaccagtagttccagcatctcttgta
cagtcgtcgatgactattgctcaagaatcaatgaaagattttagcagccttgttctacca
ggtggtactgtttctagtagtcttacgacaccaacattatctgccggaagtgtcttttct
tctctttcaaagaacagttcagaattagatgaaaaaggatctcttcgtgctgatcttcag
acctcttctaccgaaaagagaactgttcaagatgacgtttcaagcagttctggacttacc
gagggaatacagccacctggtatcacaaccagttctgggcatgtagggggaatccagcca
ccccatgtctcaagtagtgctggacttgtgcagccagtcaatgtttcaagcagctctggg
cttttgacaagagttcaaccacccactgcttcaaatagttccggtcttataacaggtgtt
caggctccaagtgtctcaagtagctctgggcttttgacaggacttcagcccataaatgtt
tcaagcagctccaaccttttaatgggaatccaaccacccatagtctcaaataatactgga
cgtttgtcaggaatccagccacccattgtatcaagtagttctgggcttttgacagcactc
cagccacccattgtatcaaacagttctgcaattttaggattgccaccaccaatagtttca
agtagttctggactgttaggattaccaccaccaaatatttcaggtggttctggactatta
ggactacaaccacccactggaatgcaaaatttgtcccatttaactcttgctagtcaacgg
ttgcctggaattcctctagtagaaatccgatcgggattaataccacaaccacctggtcct
aggtttccactactgcaacctgggatgccaccacaacgtacaattcctcctccagctata
cttgatccatcccttcctccacctagagttcctttccttccaggagatatttttactcaa
acagagaggtcatttgcaacttccagtaggcaaaatatggatatttctaacccagataaa
agattgcctgttggggaagatagcattcaacaagaaggagatagagactatcgattccct
ccagtggaaagtagagatcgaacatcttcagtagatataagggattctattggaaggcca
ccactagatccaagagaaggtctaggtcgacctcctatagatggaagagaacatcttatg
aggccacatatagatttacgggagaactttggaaggccaggtatggataatctaagaaga
gagcattttgctttcaactcagaaaaacactggggtcaaagaggagattatgatgaaaga
gaacatcaggcctttcctgtatatggtggtctcaaggggttccaggattttcgagagaga
tatcggcaaacaaactacagatttgaaactcgaagtggtcctatctggaacagaggactt
gaacaagatgctcacagagactttgatgaccgtcgtagaccatgggaaagacaaagggac
agggatgatagagattttaattttggtagagaaattaatggaaacagatttgggagagaa
agaacacagaacaactggctacaccctccacatctaagagcgtttgaatattttgaaggt
ggtgcttctcaacaaaaagttgatagtgtaccccaagttaatggtgaaaacacagagaca
gagaatcagccatctgctgtgcaagtgcaagatgaattggaactttatgaaaagttggcg
acttcaaatgagacaaaaaaagagaagagtgacacagaagctgaattagaaaatgaacca
gtggtagaaagcacagaaactgaggggacataa
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