Ahaetulla prasina (Asian vine snake): 131191377
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Entry
131191377 CDS
T09329
Symbol
ZCCHC7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131191377 (ZCCHC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apri03019
]
131191377 (ZCCHC7)
03016 Transfer RNA biogenesis [BR:
apri03016
]
131191377 (ZCCHC7)
Messenger RNA biogenesis [BR:
apri03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
131191377 (ZCCHC7)
Transfer RNA biogenesis [BR:
apri03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
131191377 (ZCCHC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_3
AIR2-like_ZnK4
Motif
Other DBs
NCBI-GeneID:
131191377
NCBI-ProteinID:
XP_058025423
LinkDB
All DBs
Position
2:complement(199160069..199307937)
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AA seq
585 aa
AA seq
DB search
MLFSGYGDAEAFEDDPYSEGSSSETSIDSEVEFHLYSQVHYAQDLGDVGENNNKDVKGQQ
EFKSLKKEKSENEQNQRNNLILISDSDVNSSDSSDVIILSDTLEEDSIYESKLQKLTTSV
SPTLRKLNKTAYSRAKKAIEHPSQPILKSEDQITVNSSKARKGNEKAILNNQDDVHMIHR
VLVTEDNSRSDDEIDVSSISSESDNVESWMLLGSAADDKDDDILLNLEGCRTSASGGEDT
TGWTISDKDLQAQIGNYVSVRHNNRYYTADKNVTCRNCDKRGHLSKNCPAPKKIPPCCLC
AQRGHLQNSCPARFCLNCCLPGHCSRECPERMYWKKHCNRCDMRGHYADACPEIWRQYHL
TTRPGPLKTADSYSVQPASPYCYNCGEKGHYGFECLERRMFGGIFPTFPFIYYYDNEYDI
KRSLQRAKKKVQELQEAGLLPESPNRPHRDYDREEHKRKKKREAWKEHDKRGDHKNLRKK
SHADLVKERKHKKKFQSNYMIEECFPRGGHVNAHKRCRRKTPHHQSVGFLADGKTENHRV
SIESGKRRKRKKKQKSHTNNSCTRDESLFLIKQKKKKMTPKTSLI
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgttgttcagtggatatggcgatgcagaagcatttgaagatgatccttattctgaaggg
tcttccagtgaaacaagcattgatagtgaagtagaatttcatctttacagtcaagtccat
tatgcacaagaccttggtgatgtcggtgaaaataacaataaggatgtcaaaggacaacaa
gaatttaagtccttgaagaaagagaaatcagagaatgaacaaaatcagagaaataactta
attctcatttcagatagtgatgttaacagttcagatagctcagatgtcataatattgtct
gatacccttgaggaagatagcatttatgaaagtaaactccagaaactaacaacatcagtg
tctccaacattacgtaaattaaataagactgcttactctcgtgccaaaaaagctattgaa
cacccttcccagcctatcctgaaatctgaggatcaaattacggtaaattcaagtaaagca
agaaagggtaatgaaaaggcaatcttaaataaccaagatgatgttcacatgattcataga
gttttagtaactgaggacaattccagaagtgatgatgaaattgatgtgtcaagtatatcc
tctgaaagtgataatgtggagagctggatgctgctgggaagtgccgcagatgacaaagat
gatgatatcctgttaaaccttgaaggctgtagaacttcagccagtggaggagaagataca
acaggatggaccatcagtgataaagacttacaggcacagattggtaattatgtttcagtg
cgacataacaacagatactacacagcggacaaaaacgtcacttgcagaaattgtgataaa
cgaggtcatttatcaaaaaattgccctgccccaaagaaaattccaccctgttgtctttgt
gcacagagaggtcacctgcaaaacagctgtccagcacgattttgtttaaattgttgtttg
ccaggacactgttctagagagtgccctgagagaatgtactggaaaaaacattgcaaccgc
tgtgatatgagaggtcattatgcagatgcttgcccagaaatatggaggcagtatcaccta
acaactagaccaggaccactcaagacagctgactcttattctgtgcaacctgcttcacca
tactgttacaactgtggagaaaaaggccactatggatttgaatgcttggagaggcgaatg
tttggaggaatatttcctactttcccctttatctattactatgacaatgaatatgacatc
aagaggagccttcagagagcaaagaaaaaagtgcaagaacttcaggaagctggccttcta
ccagagtctccaaacagaccacacagagattatgatcgagaagagcacaaacgtaagaaa
aagagggaagcttggaaggaacatgacaagaggggagatcataagaacctaaggaaaaag
tctcatgcagatctagtcaaagaaaggaagcataagaagaaatttcaaagcaactatatg
atagaagagtgctttcctagagggggccacgtgaatgcacataagaggtgcagacggaaa
actcctcatcatcaaagtgttggctttctggcagatggcaaaactgaaaatcaccgagtt
tctatagagtcaggaaaaaggcggaagagaaagaaaaagcagaagagccacacaaacaat
agttgcaccagggatgaaagcttatttcttatcaaacagaagaaaaagaaaatgacaccg
aaaaccagcttgatctga
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