Ahaetulla prasina (Asian vine snake): 131191506
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Entry
131191506 CDS
T09329
Symbol
DHX16
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 isoform X1
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131191506 (DHX16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
apri03041
]
131191506 (DHX16)
Enzymes [BR:
apri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
131191506 (DHX16)
Spliceosome [BR:
apri03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
131191506 (DHX16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
WHD_HA2
DEAD
AAA_22
AAA_19
Cas3-like_C_2
SecA_DEAD
AAA_30
nSTAND3
Flavi_DEAD
PWI
T2SSE
Motif
Other DBs
NCBI-GeneID:
131191506
NCBI-ProteinID:
XP_058025700
LinkDB
All DBs
Position
2
Genome browser
AA seq
1052 aa
AA seq
DB search
MAGDLERWVSNQLHTLLGLSERHVVAFMVGLAQRSRTPEDLLDRLEETETLRVTEPTARA
FAQQLWERVPHQVPQERPARLAEQQALALQEKNRSYTLLEDSDDEETGKATAARNSKRHH
LSQGPEGKQRKRHKHLRQRKEEEDDKDSDEKPSGEDTGRIPEEDSEDEWDRSERERLQDL
EERDAFAERVKRKDKEKTRNILERSDKKAYEEAQKRLKMVEEDKKFMIPELRKKSRWEYL
AKREKDKMEDLEAEIADEEYLFSEQELSALEQQELEYKRKVRDLAKQYKQAGEQEKMEKH
NRYYMPEESRSKKIPDRYEEPQAEDHMAPRDEQRRWEEDHIGAAALRFGARDADRRHPRK
DYEYVLEEDEMIQFVNAVQMRGANQNKEEKPELSQAELKKLSIQEVRRSLPIFPYHEDLL
AAIAEHQMLIIEGETGSGKTTQIPQYLYEEGYTKKGMKIGCTQPRRVAAMSVAARVSQEM
NVKLGNEVGYSIRFEDCTSERTVLKYMTDGMLLREFLTEPDLSSYSVIIIDEAHERTLHT
DILFGLIKDIARFRPELKVLIASATLDTERFSTFFDDAPIFRIPGRRFPVDIYYTKAPEA
DYLEACVVSVLQIHVTQPRGDILVFLTGQEEIEACCEMLQDRCRRLGSKIAELVVLPIYA
NLPSDMQAKIFEPTPPGARKVVVATNIAETSLTIDGIIYVIDPGFCKQKSYNARTGMESL
IVTPCSRASANQRAGRAGRVAAGKCFRLYTAWAYKNEMEETTVPEIQRTNLGNVVLLLKS
LGINDLIHFDFMDPPPHETLVLALEQLYALGALNHLGELTKLGRKMAELPVDPMLSKMIL
ASEQYKCSEQILTIAAMLSVNNAIFYRPKDKVVHADNARMNFFLPGGDHLVLLNVYTQWV
ESGYSMQWCYENFIQFRSMRRARDVREQLEGLMERIEVDITSTEGDYIPIRKAVTAGFFY
HTARLTRSGYKTVKHQQTVYIHPNSSLFEEQPRWIIYHELVFTTKEFMRQVIEIDSTWLL
EVAPHYYKAKELEDASTKKLPKKMGKTREELG
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagacttggagcgctgggtatcgaaccagctgcatacccttctcgggctaagc
gagcgccatgtcgttgctttcatggtgggcctggcccagcggagccggactccggaagac
ttgctcgatcgcttggaggagacggagacgctgcgggtgaccgagcccaccgcgcgcgcc
tttgcccagcagctctgggagcgggttccacaccaggtgccacaggagcgtccagccaga
ttagctgagcaacaggccttagccctgcaggaaaagaatcgttcatacaccctgttggag
gacagtgatgatgaagaaaccggtaaagcaacagcagcccgaaactcaaagcgtcatcac
ctctcacaaggtcctgagggcaagcaacggaaacggcacaaacacctgaggcagcgcaag
gaagaagaggacgacaaagactctgatgagaagcctagtggagaggacacaggacggatt
ccagaggaggattcagaggatgaatgggaccggagtgaacgagagcggctgcaggatttg
gaagaacgtgatgcttttgcagaacgtgttaaacgcaaggacaaagagaagactcgcaat
atcctcgagagatcagacaagaaggcatatgaagaagctcaaaagcgtttaaagatggta
gaagaggacaagaaattcatgattccagaactacgtaagaaatcccgttgggagtattta
gccaaacgagaaaaggataaaatggaagacttggaagcagaaatagcagatgaggagtac
ctcttctctgagcaagaactatcagcccttgagcagcaggagctggagtacaaacgcaaa
gtgcgcgacttggccaaacagtacaaacaggctggagagcaggagaagatggagaagcac
aatcggtactacatgcctgaggagagccgcagcaagaagattcctgatcgttatgaggag
ccccaggcagaggatcacatggctccaagagatgagcagcggcgctgggaggaagaccac
attggggcagctgctctccgttttggggcccgggatgccgatcggcgccatcctcgcaaa
gactatgagtacgtgcttgaggaggatgagatgatccagtttgtgaacgctgtgcaaatg
cggggcgcaaatcagaacaaggaggagaagccggagctgtcccaggctgaactcaagaag
ttgtctatccaggaggtgcgccgcagccttcctatttttccataccatgaagacttattg
gctgccattgctgaacatcagatgctcattattgaaggggaaaccggctctggcaagacc
actcaaatcccacagtatttgtacgaagagggttacaccaagaaaggaatgaagattggc
tgtactcaacccaggcgagttgcagctatgagtgttgctgcccgtgtttcccaggaaatg
aatgtcaagcttggaaatgaagtaggatacagcatccgttttgaagattgcacttcagag
cggacagtgttgaagtacatgacggatgggatgctgctcagagaatttctcactgaacct
gacctgagcagctatagcgtcatcatcatcgatgaggctcatgagcgcacgctgcacacc
gacatcctatttggcttgatcaaggacattgctcgtttccggcctgagctgaaggtgctg
attgctagtgccaccctggacaccgagcgcttttccaccttctttgatgatgctcctatc
ttccgcatcccggggcgccgttttcctgttgacatttattacactaaggcaccagaggct
gattatctggaagcctgtgtggtatcggtgctgcagattcatgttactcagccccgaggg
gacatccttgtatttcttacgggccaggaagaaattgaagcctgctgtgagatgttacaa
gatcgttgccggcgcttgggctccaaaattgcagaacttgtggtccttccaatttatgct
aatctgccctccgacatgcaagccaagatctttgaaccaaccccaccaggtgcccggaag
gttgttgtggccacaaacatagcagagacatcactgaccatagatggcataatttacgtc
attgaccctgggttttgcaaacagaagagttacaatgctcggacgggcatggagtcactt
attgttaccccctgttctcgggcttctgccaaccaaagagcaggccgggcaggccgtgtg
gctgcagggaagtgctttcgtctctacacagcctgggcgtacaaaaatgagatggaggaa
accacggtgccagagattcagagaaccaaccttggcaacgtagtgcttcttctcaaaagc
ttaggcatcaatgatttgattcattttgacttcatggatccaccaccccatgaaactctc
gtattggcgttagagcagctgtatgccttgggggccctcaaccatcttggcgaactcacc
aagttgggccggaagatggcagaattgcctgttgatcccatgctctcgaagatgattcta
gcttctgaacagtacaagtgctcagagcaaatcctgaccattgctgctatgctttcagtc
aacaatgccattttttaccgtcctaaggacaaagtggttcatgctgacaatgcccgcatg
aatttcttcctgcctggtggagaccatctggttcttctcaatgtttatactcagtgggta
gaaagtggttactctatgcaatggtgctatgagaatttcatccagtttcgttctatgagg
agagctcgagatgtgcgagaacagctggaagggttgatggaacgcattgaggtggatatt
acttccactgaaggggactacattcctatccgcaaggctgtaacagccggtttcttttat
cacactgcccggctaacccgcagcggttacaaaacagtcaagcatcagcagacagtgtat
atccatcccaacagctccttgtttgaagagcagccccgctggatcatttatcatgaactg
gtcttcaccactaaggaattcatgagacaggtgattgaaattgacagtacgtggctgctg
gaagtggcccctcactactacaaggccaaagaactggaagacgcctcaaccaagaaactg
ccgaagaaaatggggaagacacgagaagagctgggataa
DBGET
integrated database retrieval system
