Ahaetulla prasina (Asian vine snake): 131191874
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Entry
131191874 CDS
T09329
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131191874 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apri03019
]
131191874 (XAB2)
03041 Spliceosome [BR:
apri03041
]
131191874 (XAB2)
Messenger RNA biogenesis [BR:
apri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
131191874 (XAB2)
Spliceosome [BR:
apri03041
]
Complex B
Other components
Prp19-related factors
131191874 (XAB2)
Complex C
131191874 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
TPR_2
Suf
TPR_12
TPR_8
TPR_15
ARM_TT21_C
ARM_TT21
TPR_16
RPN7
TPR_1
NRDE-2
LTN1_E3_ligase_6th
Motif
Other DBs
NCBI-GeneID:
131191874
NCBI-ProteinID:
XP_058026440
LinkDB
All DBs
Position
2:118984949..119006172
Genome browser
AA seq
852 aa
AA seq
DB search
MPESETVSGKRELFFEEEDLQYEEEILRNPFSVKCWIRYIDFKQNAPKHILNLIYERALK
ELPGSYKLWYNYLKQRRKQVKSKCVTDSCYEEVNNCHERALVFMHKMPRIWLDYCQFLMD
QCRITRTRRTFDRALRALPITQHHRIWPLYLKFVRLYPLPETAVRVYRRYLKLSPENAEE
YIEYLRSIDRLDEAAVRLGAVVNDERFVSKEGKSNYQLWHELCDLISQNPDKVKSLNVGA
IIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIQTVMTVRDFTQVFDSYAQF
EESMIAAKMETNSEMGREEDDDIDLELRLARFEQLITRRPLLLNSVLLRQNPHNVHEWHK
RVKLYEGKPWEIINTYTEAVQTVDPFKATGKTHTLWVSFAKFYETNGQIEDARTIFEKAT
KVNFKQVDELASVWCEYGEMELRHENYDQALRILRKATAIPAKKAEYFDSTEPVQNRVYK
SLKVWSMLADLEESLGTFKSTKAVYDRILDLRIATPQIIINYGLFLEEHKYFEESFKAYE
RGISLFKWPNVYDIWNTYLTKFIDRYGGKKLERARDLFEQALDGCPQKFAKTIYLLYARL
EEEYGLARHAMAVYERATQAVLPAEQHDMYNIYIKRAAEIYGVTHTRSIYEKAIEVLSDE
HARDMCLRFADMECKLGEIDRARAIYSYCSQICDPRTTANFWQTWKEFEIRHGNEDTIRE
MLRIKRSVQATYNTQVNFMASQMLKVYSNATGTVSDLAPGQSSMDDMKLLEQRAEHLAAE
AERDQPRTKEKILFVRSDASRSELAELSKRANPDEIDIDLDDSDESEDNEPDEVQLEQKT
VPSAVFGGLKDD
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgccggagtcggagacggtgtcaggaaagcgggagcttttcttcgaggaggaagaccta
cagtatgaagaagagatcttacgcaacccattctctgtcaagtgctggatccgctatatt
gacttcaagcaaaatgctcccaaacatatcttgaacctgatctatgagagagcccttaag
gaattgccgggaagctacaagctctggtacaactatcttaagcagaggcggaaacaagtg
aagagcaaatgtgtaacagattcctgctatgaagaagtgaacaactgccatgagcgtgcc
ctggtcttcatgcataagatgcctcggatatggctagattactgccagtttctcatggac
caatgtcgcatcacccgtacccgcaggacatttgaccgggccctcagagctctgcccatc
acacagcaccatcgtatctggccactttatctgaagtttgtgcggctctatccattacct
gagacagctgtacgggtctaccgtaggtacctaaagctgagccctgagaatgccgaggaa
tatattgagtatctgcgctccattgaccgtctggatgaagctgctgtccgtcttggagca
gtggtgaatgatgagcgttttgtttccaaggagggaaaatccaattatcagttatggcac
gagctctgtgatctcatctctcaaaatccagacaaggtgaagtcactcaatgtgggggcc
atcatccgaggtggcctgactcgtttcacagaccagttgggcaagctgtggtgttctttg
gcagattactacatccgcagtggccattttgagaaggctcgtgatgtgtatgaagaagct
attcagacagtgatgacggtacgggatttcactcaagtgtttgacagctacgcccagttt
gaggagagcatgattgctgctaagatggagaccaattctgaaatgggacgtgaggaggat
gatgatatagatctggaactgcgtctggcacgctttgagcagctgatcacgcggcggcct
ctgctcctcaacagcgtcctcctgcgccagaatccccacaatgtccatgagtggcacaag
agagtgaagctgtatgaaggcaaaccatgggagatcatcaacacttacacggaagcagtg
cagactgttgacccatttaaagccactgggaagacacatacgttgtgggtttcttttgcc
aagttctacgagaccaatggacagatagaagatgccagaacgatttttgaaaaagccact
aaggtgaacttcaagcaggtggatgaactggccagcgtctggtgcgagtatggtgagatg
gagctgcggcatgagaactacgatcaagccctgcgtatcctgaggaaagctacagctatc
ccagctaagaaagccgaatattttgattccacagagcctgtgcagaaccgtgtatataag
tccctcaaggtttggtccatgctggctgacttggaagaaagtctcggcactttcaaatct
actaaggctgtatacgatcgcattttggatcttcgcattgccaccccacaaatcatcatt
aactatggtcttttcctggaggagcacaaatattttgaagagagcttcaaggcatatgag
agaggcatctccttgtttaagtggccaaatgtttatgatatctggaacacctatctaacc
aaattcattgaccgctatggtggcaagaagttggagcgtgctcgagatctttttgagcag
gccctggatggctgtccccagaaatttgcaaaaaccatctatctcttatatgccaggcta
gaggaggaatatgggctggcccgccatgccatggcagtatatgagcgagctactcaggct
gtgctgcctgcagagcagcatgatatgtacaacatctacatcaagagagcagctgaaatt
tatggcgtcacccacacacgtagcatctatgagaaggcgattgaggtgctatcagatgaa
cacgctcgggacatgtgtctgcgctttgctgatatggaatgcaaattgggtgaaatagac
cgagctcgggcaatctattcctattgttcacagatttgtgatccccgaactactgccaac
ttctggcagacatggaaagaatttgagattcggcatgggaatgaagacactatccgagaa
atgctacgcattaagcgaagtgtgcaggctacttacaatactcaggttaacttcatggct
tctcagatgctaaaggtttacagcaatgccacaggcacagtctctgacttagcaccagga
cagagcagcatggatgacatgaagctcttagagcagcgagcagaacacctggcagccgaa
gcagaaagagatcagcctcgaactaaggagaagatcttgtttgtcaggagtgatgcttcc
cgcagtgaattggctgaactttccaagcgggccaatcctgatgagatagacatcgatttg
gatgacagtgatgagagtgaagacaatgagcctgatgaggtgcagctagaacagaagacc
gtcccctctgctgtgtttggtggccttaaagatgactga
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