KEGG   Ahaetulla prasina (Asian vine snake): 131192431
Entry
131192431         CDS       T09329                                 
Symbol
THOC3
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
apri  Ahaetulla prasina (Asian vine snake)
Pathway
apri03013  Nucleocytoplasmic transport
apri03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:apri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131192431 (THOC3)
  09122 Translation
   03013 Nucleocytoplasmic transport
    131192431 (THOC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:apri03019]
    131192431 (THOC3)
   03041 Spliceosome [BR:apri03041]
    131192431 (THOC3)
Messenger RNA biogenesis [BR:apri03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     131192431 (THOC3)
Spliceosome [BR:apri03041]
 Complex C
  Other components
   EJC/TREX
    131192431 (THOC3)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    131192431 (THOC3)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40_CDC20-Fz WD40 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st ANAPC4_WD40 WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd EIF3I Beta-prop_Aladin Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st Beta-prop_RIG_2nd WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_Vps41 Beta-prop_IFT122_1st Beta-prop_WDR36-Utp21_1st eIF2A Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_HPS5 NBCH_WD40 WD40_MABP1-WDR62_1st RMC1_N Tricorn_2nd WDR90_beta-prop_4th Beta-prop_ACSF4 Beta-prop_SPT8 Beta-prop_WDR75_1st B-prop_COPA_B_2nd Beta-prop_NUP159_NUP214 Beta-prop_EIPR1 Peptidase_S9_N Beta-prop_WDR41 PD40 Me-amine-dh_H Beta-prop_Nup120_160 Beta-prop_LRRK2 Cytochrom_D1 CNH YNCE WD_LRWD1 PROPPIN Beta-prop_WDR11_1st Beta-prop_NWD2_C
Other DBs
NCBI-GeneID: 131192431
NCBI-ProteinID: XP_058027560
LinkDB
Position
2:82630076..82640752
AA seq 323 aa
MAVSAYVKDMQEKFRANTRSREFPAHGAKVHSVAWSCCGHRLASGSFDKTASVFVLDKDR
LVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKCIDTVNTKGENINIC
WSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNNMFFLTNGNGCINI
LSYPELKPIQSINAHPSNCICIKFDPTGKYFATGSADALVSLWDVDELVCVRCFSRLDWP
VRTLSFSCDGKMLASASEDHFIDIAEVETGEKLWEVQCESPTFTVAWHPKHPLLAYACDD
KDGKYDNSREAGTVKLFGHANDS
NT seq 972 nt   +upstreamnt  +downstreamnt
atggctgtttctgcttacgtgaaggacatgcaggagaagttccgggctaacacgcggagc
cgcgaattccctgcgcatggggccaaggtccactcggtggcctggagctgctgcggccac
cgtctagcctccggctctttcgacaagaccgccagcgtcttcgtgttggataaagaccgg
ctggtcaaggaaaacaattaccgtggtcatggagatagtgtggatcagttgtgttggcat
cctagtaacccagatctatttgttacagcatctggtgataaaaccattcgtatatgggat
gttcgaaccactaagtgcattgacacagtgaatacaaaaggggaaaacattaacatctgc
tggagccctgatggccagactattgcagtagggaataaagatgatgttgtcacattcatt
gatgctaagacacatcggtccaaagctgaagagcaattcaagtttgaggtgaatgagata
tcttggaacaatgacaacaacatgtttttcctcaccaatggcaacggatgtatcaacatc
ctcagttacccagagctgaaacccattcagtcaattaatgcccacccctcaaattgcatt
tgtatcaagtttgatccaacgggcaagtattttgctactggaagtgctgatgcattggtt
agtctctgggatgtggatgagctggtatgtgtacgatgcttttctagacttgattggcct
gtcaggactttaagctttagctgtgatggcaagatgctggcttcagcctctgaagatcac
ttcattgatattgctgaagtagaaactggggagaagctctgggaagtacagtgcgagtcc
ccaaccttcacagttgcttggcatccaaaacacccgctattagcctacgcttgtgatgat
aaagatggcaaatatgataacagtagagaagcgggcactgtgaagctctttggtcacgcc
aatgactcttag

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