Ahaetulla prasina (Asian vine snake): 131193647
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Entry
131193647 CDS
T09329
Symbol
CDC40
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131193647 (CDC40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
apri03041
]
131193647 (CDC40)
Spliceosome [BR:
apri03041
]
Complex C
Other components
Step II factors
131193647 (CDC40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
EIF3I
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
ANAPC4_WD40
WD40_RFWD3
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_NWD2_C
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
131193647
NCBI-ProteinID:
XP_058030062
LinkDB
All DBs
Position
1:complement(117605516..117646394)
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AA seq
583 aa
AA seq
DB search
MSAAIAALASYGGSDSESDSGSDAEGRPGLSAQVAGADAVLHLASPPPSAQQVLLPVVDS
APAVSVKEDVETGVHLDPTTKEVQYNPKYDTMFAPEFGPVNPFRTQQMAAPRNMLSGYTE
PAHINDFMFEQQRRTFATYGYALDPSIDNYEVSTKYIGSVEEAEKNQGLTVFETGQKKIE
KRKKFKENDASNIDGFLGPWAKYVDEKEVAKPSEEEQRELDEITAKRQKKGKHEDDKPGE
EKTVLHVKEMYDYQGRSYLHVPQDVGVNLRSTVPPEKCYLPKKQIHVWSGHTKGVSAVRL
FPLSGHLLLSCSMDCKIKLWEVYGERRCLRTFIGHSKAVRDICFNNAGNQFLSAAYDRYL
KLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDSRSGEIVQEYDR
HLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWL
ACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVTSGDADGKLNIWD
WKTTKLYSRLKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccgccatcgctgccctcgcgtcatacgggggctcggattccgagtccgactcg
ggctcggatgctgaaggaaggcccggcctttccgctcaggtcgccggggccgacgctgtg
cttcacttggcatcgccgccgccctctgcgcaacaggtgctgctgccggtagtggactcg
gccccagctgtgtcggtcaaggaagatgtggaaacaggagttcatcttgatccaaccacc
aaggaagttcaatataatccaaagtatgacaccatgtttgcaccagagtttgggccagtc
aatccatttaggactcaacagatggccgctcccaggaacatgctttctggatatacggaa
ccagcacatattaacgatttcatgtttgaacaacagagaagaacatttgcaacttatgga
tatgcattagatccttccatagacaattatgaagtatctactaaatatattggatctgta
gaagaagcggaaaaaaatcaaggtttaacagtgtttgaaacaggacaaaagaaaatagag
aaaaggaaaaaattcaaagagaatgatgcatctaatatagatggcttcttgggaccttgg
gcaaaatatgttgatgaaaaggaggttgcaaaaccttctgaagaagaacagagggaactg
gatgaaataactgcaaaaaggcagaagaagggcaaacatgaagatgataaacctggagaa
gaaaagacagttttgcatgtcaaagaaatgtatgactatcaagggaggtcttaccttcat
gttcctcaggatgttggtgttaacctacgttcaacagtacctcctgaaaaatgttacctt
cctaagaaacaaatccatgtatggtcaggtcatacaaagggagtcagtgccgtcaggctg
tttcctctgtccggccatctgctcttatcttgttccatggactgcaaaattaagctctgg
gaagtatacggtgaacgaagatgcttgagaacattcattggacacagtaaagctgttagg
gatatatgctttaacaatgctgggaaccaattcctcagtgctgcatatgaccgctatctc
aaactgtgggacactgaaacaggacagtgtatttcaagattcaccaacaggaaagttcct
tactgtgtcaaattcaatcctgatgaagacaagcagaatctttttgtagcaggaatgtcg
gataagaaaatagtacagtgggatagtcgaagtggagaaattgttcaggaatacgatcga
catttgggggctgtcaacaccattgtttttgtggatgagaaccgaagatttgtgagtaca
tcggatgacaagagtttaagagtctgggaatgggacattccggtagattttaagtacata
gcagagccaagtatgcactcaatgccagcagtgactttatctccaaatggaaaatggctt
gcctgtcaatcaatggacaatcagattttgatttttggagctcaaaacagattcaggcta
aacaaaaagaaaatcttcaaaggtcatatggtggcaggttatgcttgccaagtagatttt
tcacctgatatgagctatgtgacctcaggtgatgcagatggaaagttaaatatctgggac
tggaagacaacaaaactctacagtagattaaaagcccatgacaaagtctgcattggggca
gtgtggcacccacatgaaacatccaaagtgatcacttgtggatgggatggtctcattaaa
ctgtgggactga
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