Ahaetulla prasina (Asian vine snake): 131194031
Help
Entry
131194031 CDS
T09329
Symbol
SOX18
Name
(RefSeq) transcription factor SOX-18
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
apri
Ahaetulla prasina (Asian vine snake)
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
apri03000
]
131194031 (SOX18)
Transcription factors [BR:
apri03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
131194031 (SOX18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
131194031
NCBI-ProteinID:
XP_058030555
LinkDB
All DBs
Position
3:224496228..224509520
Genome browser
AA seq
469 aa
AA seq
DB search
MNRSERPFRAEEIPQARGDFSWGAVAATAAAAPPPSAAAPAAPDPGLAYPTPPTRPSRPV
ARSRSPSPEPGFGFCPGVAQPGASALSASTAAAAAAPPSSPAPSPDAAAAAAAASAGYGY
GGVPGRAEGKSSSGGGNGEDSRIRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGQA
WKALSTTDKRPFVEEAEMLRIQHLQDHPNYKYRPRRKKQAKKIKRMEPSILLHNLPQSCG
ENFAMGHRSAAGGGGIGHSQPPPLNHFRELRSMGSEMENYGLPTPEMSPLDVLEQAEPAF
FPPHMQDDCNVMSFRGYHHPPPPPPPPMEFSPEKNLGRNMVMGYPPNPPSHLAEAMRTPH
HPSGMYYNQICAAGAPNGLSAHLGQLSPPPESHQLDGVEHLNPNELWTEVDRNEFDQYLN
MSRTRPDPSGFAYHISMSKVTPRSCEDNSLISALSDASSAVYYSACITG
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaatagatctgagcgccctttccgtgcagaggagattccgcaagcccgaggcgacttt
tcatggggagccgtcgcggctaccgccgccgccgccccgccgccctccgcagccgcccct
gccgcgcctgatccggggctcgcttacccgacgccgccgacgcgtcccagccggcccgtc
gcccgcagccgatcccccagccccgagcccggcttcggcttctgccccggcgtcgctcag
cccggagcttcggctctctcggcttccaccgcggcggcggcggcggctccccccagcagc
cccgctcccagccccgacgccgcggcggcagcagcagccgcctctgccggctatggctac
ggcggcgtcccgggccgcgccgagggcaagagcagcagcggaggaggcaacggcgaggat
tcgcgcatccgccgcccgatgaacgccttcatggtctgggccaaggacgagaggaagcgg
ctggcccagcagaacccggacctgcacaacgccgtgctcagcaagatgctcggccaggcg
tggaaagccctgagtaccactgacaagcgccccttcgtggaggaagccgaaatgctcagg
atccagcatttgcaggaccaccccaattacaagtaccgaccccgccggaagaagcaggcc
aagaaaatcaagaggatggaaccaagcatccttctccacaatctgccccagtcctgcggc
gagaattttgccatgggccaccgcagcgccgccggaggaggcggcattggccactcccag
cctccgccactgaaccacttccgagaactgcgctcgatggggtcagagatggagaactac
ggcctgccaaccccggagatgtcccctctggatgtcctagaacaggcggagccggccttt
ttcccgccgcacatgcaggacgactgcaatgtgatgtcctttcgcgggtaccaccaccct
cctcctcctcctccaccgccgatggagttttccccggaaaaaaacctggggaggaacatg
gtcatggggtacccccccaacccaccctcccacctggccgaagccatgaggactccccac
cacccgtctgggatgtactacaaccagatctgtgccgcgggagcccccaacgggctgtcg
gcccacctgggccagctgtctcctcctcctgaatcgcaccagctggatggcgtggagcac
ttgaacccgaacgagctgtggacagaagtggaccgcaacgagtttgaccagtatttgaat
atgagcaggactcgtccggatccttctggcttcgcctaccatatttctatgtccaaagtg
actccccggagttgtgaggataacagcctcatctcagctttgtccgatgcgagcagcgct
gtttattatagcgcctgtatcactgggtaa
DBGET
integrated database retrieval system
