Ahaetulla prasina (Asian vine snake): 131194306
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Entry
131194306 CDS
T09329
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131194306 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apri03019
]
131194306 (NDC1)
Messenger RNA biogenesis [BR:
apri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
131194306 (NDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
GP41
Motif
Other DBs
NCBI-GeneID:
131194306
NCBI-ProteinID:
XP_058031119
LinkDB
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Position
3:168530817..168558223
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AA seq
673 aa
AA seq
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MGDVSTREQLSILRWRAAASIAWSVLLLPLCVAVFIIITSIDLFHPIQWITDSFNDLYTS
YVIFCILLLSVVILVINVFNVQFHAVVPSIHCSRLALISKIIHPQQVIHSIAHAVMGMLV
AWCAAVMTKGKFLFLSMPCRATTTESAADATLHTCLNEYHLFLLLLGAFMGYSYSLRYLV
NNLNYLPFPAIQQYKYLRFRRSLPLLAKHSCVESFYMVRNFCAAYYFFGYIPRTWIMTTM
SLRTDSNLPLLDTVAGLLDLSLLYHSWLCGLFLLMTWYIAWLLFRIFSTEAHHFPIQPTF
AEEADQCLPKILNSNPPPLLKFLALQDLMFLSQYSSVRRQEVFSLSQPGGHPYNWTSICG
ECLNLLSDLTQKLIIQQEIAAANGRLKQPSAGDLTQSFSSPAPEESSFQTPRTSIFPRAH
MHSLVKSSLLPLKTSPASDLGSNLGSPFNTSLLGHKSGLLELNSPWHGSVQSPHIMRRGP
KLWTSSSDLQLSGYPDEPHPVMVVAKDSKEAAEPGSFYMWLQNKKEQIKNFLSKRVLIMY
FFNKHPEASIQALFSDTQMHIWALEGLSHLVAASFIEDRYGVVQTTLPAILSTLLTLQEV
IDKHFKLPHVSSKPPKTSGNLADTSYKTLRFALRSSLKTAIYRITTTFGEHLNAVQVSLE
HKKRLQQFLEFKE
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgggagatgtttcaacgcgggaacagctcagtattttaagatggagagcagcagcaagc
attgcttggtctgtgctattacttcctctgtgtgtggcggtgttcattatcattaccagt
attgacctcttccatccaattcagtggatcacagattctttcaatgatttgtatacatcc
tatgtgatcttttgcatactactgctgtcggtggtgatactggtaataaatgtcttcaat
gttcagtttcacgcagttgtgccttctattcactgctcccgattagccctaataagcaag
attatccacccacagcaggtgatccattcaattgcccatgcggtgatggggatgctggtg
gcttggtgtgctgcagttatgaccaaggggaagttcctctttttgtccatgccctgcaga
gctaccactacagaaagtgctgctgatgctacccttcacacatgcctgaatgaatatcat
ctcttccttttactccttggagcttttatgggttacagttacagtctccgatatcttgtc
aacaatttgaactacctcccatttcctgccatacaacagtacaagtatctgcgcttcaga
agatctcttccactgctggcaaaacatagttgtgtggagtcgttttatatggttaggaac
ttctgtgctgcttattacttctttggttatattccaaggacatggataatgaccacaatg
agccttcgtacggatagcaatcttcctcttctagacacagtggctggtctcctggatttg
tctcttctgtatcatagctggttgtgtggtctgtttctcctcatgacttggtacattgca
tggcttctcttcagaattttttcaactgaggcacatcactttcctatccaaccaactttt
gcagaagaagcagaccaatgtttacctaaaatcttaaacagcaaccctccacccctttta
aagtttttggctttacaggacctgatgtttctttctcaatattcttctgtgcgtcgtcaa
gaggtctttagcctcagccaaccaggcgggcatccatacaactggacttcaatttgcggg
gagtgtttgaacctactaagtgatctgacacaaaagctgataatccaacaagagattgca
gctgcaaatggaagattgaaacagccatctgcaggagacttgacacagtccttcagttct
ccagctcctgaagaaagctcatttcagacgccaaggaccagcatatttcctcgagcccat
atgcattccctggttaaatcgtctctgttgcccttaaaaacatcacctgcatctgatctt
ggaagcaatttaggatcaccttttaatacttcccttttgggtcataaatctggactgttg
gagttaaactctccttggcatggatctgtccaaagtccccatattatgagaagaggacca
aaactatggacatcaagttcagatctgcaattgtcaggctaccccgatgaacctcaccca
gtgatggtggttgcaaaagattctaaggaagcagcagagccaggttctttctatatgtgg
ctacagaacaagaaagaacagatcaaaaatttcctgtcgaaacgagtcctgataatgtat
tttttcaacaagcaccctgaagcatcaatccaagccctgttttcggatacccaaatgcat
atttgggctttggaaggtttatcacatcttgtagcagcctcgtttattgaagataggtat
ggtgttgttcagacaacactgccagcaattctgagtactttgctaactcttcaggaggtt
atcgacaaacacttcaaacttcctcatgtttccagcaaacctcccaaaacttcaggaaat
cttgcagacacttcctacaagacccttcgatttgctttgagatcatcactaaaaactgca
atctatcgcataaccaccacctttggagaacatttaaatgcagtgcaagtgtctttagaa
cataagaaaagactgcagcagttcttggagttcaaggaatag
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