KEGG   Ahaetulla prasina (Asian vine snake): 131194306
Entry
131194306         CDS       T09329                                 
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1 isoform X1
  KO
K14315  nucleoporin NDC1
Organism
apri  Ahaetulla prasina (Asian vine snake)
Pathway
apri03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:apri00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    131194306 (NDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:apri03019]
    131194306 (NDC1)
Messenger RNA biogenesis [BR:apri03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     131194306 (NDC1)
SSDB
Motif
Pfam: Ndc1_Nup GP41
Other DBs
NCBI-GeneID: 131194306
NCBI-ProteinID: XP_058031119
LinkDB
Position
3:168530817..168558223
AA seq 673 aa
MGDVSTREQLSILRWRAAASIAWSVLLLPLCVAVFIIITSIDLFHPIQWITDSFNDLYTS
YVIFCILLLSVVILVINVFNVQFHAVVPSIHCSRLALISKIIHPQQVIHSIAHAVMGMLV
AWCAAVMTKGKFLFLSMPCRATTTESAADATLHTCLNEYHLFLLLLGAFMGYSYSLRYLV
NNLNYLPFPAIQQYKYLRFRRSLPLLAKHSCVESFYMVRNFCAAYYFFGYIPRTWIMTTM
SLRTDSNLPLLDTVAGLLDLSLLYHSWLCGLFLLMTWYIAWLLFRIFSTEAHHFPIQPTF
AEEADQCLPKILNSNPPPLLKFLALQDLMFLSQYSSVRRQEVFSLSQPGGHPYNWTSICG
ECLNLLSDLTQKLIIQQEIAAANGRLKQPSAGDLTQSFSSPAPEESSFQTPRTSIFPRAH
MHSLVKSSLLPLKTSPASDLGSNLGSPFNTSLLGHKSGLLELNSPWHGSVQSPHIMRRGP
KLWTSSSDLQLSGYPDEPHPVMVVAKDSKEAAEPGSFYMWLQNKKEQIKNFLSKRVLIMY
FFNKHPEASIQALFSDTQMHIWALEGLSHLVAASFIEDRYGVVQTTLPAILSTLLTLQEV
IDKHFKLPHVSSKPPKTSGNLADTSYKTLRFALRSSLKTAIYRITTTFGEHLNAVQVSLE
HKKRLQQFLEFKE
NT seq 2022 nt   +upstreamnt  +downstreamnt
atgggagatgtttcaacgcgggaacagctcagtattttaagatggagagcagcagcaagc
attgcttggtctgtgctattacttcctctgtgtgtggcggtgttcattatcattaccagt
attgacctcttccatccaattcagtggatcacagattctttcaatgatttgtatacatcc
tatgtgatcttttgcatactactgctgtcggtggtgatactggtaataaatgtcttcaat
gttcagtttcacgcagttgtgccttctattcactgctcccgattagccctaataagcaag
attatccacccacagcaggtgatccattcaattgcccatgcggtgatggggatgctggtg
gcttggtgtgctgcagttatgaccaaggggaagttcctctttttgtccatgccctgcaga
gctaccactacagaaagtgctgctgatgctacccttcacacatgcctgaatgaatatcat
ctcttccttttactccttggagcttttatgggttacagttacagtctccgatatcttgtc
aacaatttgaactacctcccatttcctgccatacaacagtacaagtatctgcgcttcaga
agatctcttccactgctggcaaaacatagttgtgtggagtcgttttatatggttaggaac
ttctgtgctgcttattacttctttggttatattccaaggacatggataatgaccacaatg
agccttcgtacggatagcaatcttcctcttctagacacagtggctggtctcctggatttg
tctcttctgtatcatagctggttgtgtggtctgtttctcctcatgacttggtacattgca
tggcttctcttcagaattttttcaactgaggcacatcactttcctatccaaccaactttt
gcagaagaagcagaccaatgtttacctaaaatcttaaacagcaaccctccacccctttta
aagtttttggctttacaggacctgatgtttctttctcaatattcttctgtgcgtcgtcaa
gaggtctttagcctcagccaaccaggcgggcatccatacaactggacttcaatttgcggg
gagtgtttgaacctactaagtgatctgacacaaaagctgataatccaacaagagattgca
gctgcaaatggaagattgaaacagccatctgcaggagacttgacacagtccttcagttct
ccagctcctgaagaaagctcatttcagacgccaaggaccagcatatttcctcgagcccat
atgcattccctggttaaatcgtctctgttgcccttaaaaacatcacctgcatctgatctt
ggaagcaatttaggatcaccttttaatacttcccttttgggtcataaatctggactgttg
gagttaaactctccttggcatggatctgtccaaagtccccatattatgagaagaggacca
aaactatggacatcaagttcagatctgcaattgtcaggctaccccgatgaacctcaccca
gtgatggtggttgcaaaagattctaaggaagcagcagagccaggttctttctatatgtgg
ctacagaacaagaaagaacagatcaaaaatttcctgtcgaaacgagtcctgataatgtat
tttttcaacaagcaccctgaagcatcaatccaagccctgttttcggatacccaaatgcat
atttgggctttggaaggtttatcacatcttgtagcagcctcgtttattgaagataggtat
ggtgttgttcagacaacactgccagcaattctgagtactttgctaactcttcaggaggtt
atcgacaaacacttcaaacttcctcatgtttccagcaaacctcccaaaacttcaggaaat
cttgcagacacttcctacaagacccttcgatttgctttgagatcatcactaaaaactgca
atctatcgcataaccaccacctttggagaacatttaaatgcagtgcaagtgtctttagaa
cataagaaaagactgcagcagttcttggagttcaaggaatag

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