Ahaetulla prasina (Asian vine snake): 131195537
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Entry
131195537 CDS
T09329
Symbol
RAD54B
Name
(RefSeq) DNA repair and recombination protein RAD54B isoform X1
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
131195537 (RAD54B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apri03400
]
131195537 (RAD54B)
DNA repair and recombination proteins [BR:
apri03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
131195537 (RAD54B)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
SWI2_SNF2
Nodulin_C
AAA_34
Motif
Other DBs
NCBI-GeneID:
131195537
NCBI-ProteinID:
XP_058033506
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All DBs
Position
3:33743474..33788223
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AA seq
889 aa
AA seq
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MRRSAAPSQLLGHSAKKPRFIPPGKTLQKTSEYVEPEIKTDEVYRRQLCNSTSVNICSTT
SGFHSSVTVKSKEEELPSENKNTVIGDLKSGMKSLCRTSIDPTATEKAGHPEEPICLTKY
FSVVWCKASKKKHKKWEGDAVLIVKGKSVMLKDMEGKNIGRGTGYQFRVLDNLIEGQSLM
IGSKEIEVMGVILEEDFKSGKCFLSGLEATEEIWNTPVASARQFCNPFKNVSKANTQENW
SNCKPRHDPLAPNSLVMPYPCPSHQRLFNKSHLPIVDVVVDPYITSHLRPHQREGILFLY
ECVMGMRVSNRFGAILADEMGLGKTLQCISLIWTLLRQGPYGCKPVIKRALIVTPGSLVK
NWGKEFQKWLGNERIKVFLVDQDHKVEEFINSPLYSVLILSYEMFLRSVDQIQKTEFGLV
ICDEGHRLKNSSIKTTAALLSLSCERRIILTGTPVQNDLQEFYALIEYVNPGILGPLSAY
KKVYEEPILRSQEPSATEENTELGEKRAAELMHLTGLFILRRTQEVINKFLPPKKESILF
CRPTTLQFALYRSLLNSQIVRSCLQGSLENSPHLICIGALKKLCNHPCLLLKAIQKKESE
SRDNQDQTNLYDGLRDVFSQECAQTDFSESDSGKLKVLTQMLAAIHERGPSERVVVVSNY
TQTLNILQEVCQRSGYLYTRLDGSTPVSQRQHIVDSFNSKFCPAFIFLLSSKAGGVGLNL
VGASHLILYDIDWNPATDIQAMARVWRDGQRHTVHIYRLLTTGTIEEKIYQRQISKQALS
GAVVDFAKGSEHIRFSVEELRNLFTLHEDSNCVTHDLLECNCMGKKDNQGCPVIQVDQSS
QSDVKVKKSLTMSQLMQWKHFCVDYKNLPDPFLDRIKDNLTFIFQNITS
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgagacggtcagcagctccaagtcaactgttggggcattcagccaaaaagccaagattc
atacctccaggaaaaaccctgcagaaaacatctgaatatgtagagccagaaattaaaaca
gatgaggtgtacaggagacaactgtgtaactcaacttctgtaaacatttgttctacaact
tctggctttcattcttctgtaactgtaaaatccaaggaagaagaactgccctctgaaaac
aagaatacggtgattggggatttgaaatctggaatgaaatcactgtgcagaacatcaata
gatccgacagcaacagaaaaagcaggacacccagaggagcccatctgccttaccaaatat
ttcagtgttgtctggtgcaaagcctcaaagaaaaaacataagaagtgggaaggtgatgct
gttcttatagtgaaaggaaagtccgtgatgctcaaggatatggaaggcaaaaatattgga
agaggcactggatatcagttcagagtcttagacaatctcattgaaggtcagagtctgatg
attggaagcaaagaaattgaagtgatgggtgtgatattggaagaagactttaaaagtggc
aagtgttttctgtctggtctggaggccacagaagaaatttggaataccccagttgcttct
gcaaggcagttttgtaatcctttcaaaaatgtttccaaagccaatactcaagaaaactgg
tctaactgtaaaccacgccatgatccgttagctccaaattccttagttatgccatatccg
tgcccaagtcaccagcgattgtttaacaagtcacatttgcctattgtggatgtggttgta
gacccttacattacaagccatcttcgcccacatcagcgagaaggaattctatttctttat
gaatgtgtgatgggaatgagagtgagcaatagatttggcgccatccttgcagacgaaatg
ggtttaggaaaaacactgcagtgtatttcactcatctggacactcctgcgtcaaggacct
tatggatgcaagcctgtaataaaacgagccttgatagtaactcctggaagtctggtgaag
aactggggaaaggaatttcagaaatggttgggaaacgagagaatcaaagtgttcttagtt
gatcaggatcacaaagtggaagaattcatcaattcccccctttattcagtcctgatcctt
agttatgagatgtttctacgttctgtggaccaaattcagaagacagaattcggccttgtc
atctgtgatgaaggacatcgtttgaaaaacagttctattaagacaactgctgctcttctc
agcctctcctgtgaaagaagaattattcttactggtactccagtacaaaatgaccttcaa
gagttttatgctttaatagaatatgtaaatcctggaatacttggtcctttatctgcatac
aaaaaggtatatgaggagcctattcttagatcgcaagaaccttcagcaactgaggaaaac
actgaactaggtgagaaacgggcagcagagctgatgcatctaacaggactcttcattctt
agaagaacgcaagaggtcatcaacaaattcttgcctcccaaaaaggagagcatacttttc
tgtcgtccaacgacgttgcagtttgctctttatcgaagtcttttgaactctcagattgtt
agatcttgcctacaaggaagtttggagaacagcccacatttaatatgcatcggggctttg
aaaaaactttgtaaccatccctgccttctcttgaaagcaatacagaagaaagaatctgag
tctcgtgataaccaagatcaaacaaacctttatgatggtttacgtgatgttttttctcaa
gaatgtgctcagacagatttctctgagagtgactcaggaaagttgaaggtgctaacgcag
atgctggcagcaattcatgaacgtggaccttcagaaagagtcgttgtggtatctaattat
acacagacgttaaatatattacaagaagtatgccaacgatctggatatctctatactaga
cttgatggcagcacccccgtctcccagaggcaacatattgttgatagtttcaatagtaaa
ttttgcccagccttcatcttcctattaagttcaaaggctggtggtgttggtttgaacctt
gttggagcatctcatttaatcctgtatgatattgactggaatccagcgactgatattcag
gcaatggccagagtatggagagatggacaaaggcatacagttcatatttacagactactc
actacaggcacaatagaggagaaaatctatcaaaggcaaatcagcaagcaagctctctct
ggagcagttgtagactttgccaagggatctgagcatatccgtttttctgttgaagaactt
agaaacctcttcacgttgcatgaagattccaattgcgtgacccatgatttgctggagtgt
aactgcatgggaaagaaagataatcaaggctgccctgtgatccaagttgaccagagtagc
caaagtgatgtgaaagtcaaaaagtctctgactatgtcacaactgatgcaatggaaacac
ttttgtgtggattacaaaaatctccctgatcccttccttgacaggataaaagacaacctt
acattcattttccaaaatataacaagttga
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