Ahaetulla prasina (Asian vine snake): 131196083 Help Entry 131196083         CDS       T09329                                  Symbol RC3H1 Name (RefSeq) roquin-1 isoform X1   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism apri  Ahaetulla prasina (Asian vine snake) Brite KEGG Orthology (KO) [BR:apri00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:apri03000]     131196083 (RC3H1)    04121 Ubiquitin system [BR:apri04121]     131196083 (RC3H1) Transcription factors [BR:apri03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     131196083 (RC3H1) Ubiquitin system [BR:apri04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     131196083 (RC3H1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX Prok-RING_4 zf-RING_2 zf-C3HC4_4 zf-CCCH zf-C3HC4_3 zf-C3HC4 zf-C3HC4_2 FYVE zf_CCCH_4 PaaA_PaaC zf-CCCH_UNK Vesi_VP2 Baculo_IE-1 zf-RING_4 zf-CCCH_4 zf-RING_6 Motif Other DBs NCBI-GeneID:  131196083 NCBI-ProteinID:  XP_058034493 LinkDB All DBs Position 3:complement(120850316..120921373) Genome browser AA seq 1126 aa AA seqDB search MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD IEHLPVNSALLQLVGAQMPEQQPITLRSGVEDTKHYEEARKCVEELALYLKPLSSARGVG LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLTRLRPHLELL ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGADQQQPPQHSKYKTYMCR DMKQRRECPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPAAAIISDE ATVDLPNRKPSTLPNGIVSPGSTVTQLISRGTDSSYDSVMKPGKMDHHSSSAPGSPPDLL EPVSKSSHPVPPRGPTDLPPISVGKQLQIVPRGSQLYPAQQTDVFYPDPRGTAPPFEPPP YQTGVYYPPAQSLQCMSRFVRPPSSIPEPGPPFVEQHYAPYLQDRIMNSQYSTQPQQYPP MSQPVYPPHYDSRRVYPAAQPYQREDIIRGSPVPIEISPPAVSPYVPETRDRYQQVEGYY PVGPHLNQIRPSYHREPYSRAPPQPHPSLDELHRRRKEIMAQLEERKVISPPPFASSPTL PHSLHTDEYLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDIVAVGLVEMVN VDSKGMRDQRLDLQRRAAETGDDDLIPFGDRPTVSRFGAISRTSKAMYQNPGPMQAMTVQ GASAKPVSVSDYSPYGTHSAWGGSPYSPHQNVPSQGRLGDRERLSMTDIANHGKSLPSSE REQQLRLELQQLNHQISQQTRGLEAVSNRLLLQREATPLAGQPQPPPPPPKWPGMISSEQ LSLELHQVEREIGKRTRELSMESQSSLDVKNKANAGKQTENGQQGKVPPEDLSLTFSDLP NGSAPTQEIIGLLSNKTTALSLSEDTDAVAGDQDTQRTGATPTSAP NT seq 3381 nt NT seq  +upstreamnt  +downstreamnt atgcctgtacaagctccacaatggacggattttctctcctgccctatttgcacacaaaca ttcgacgaaacgatccggaaacccatcagtctaggttgtggccacacagtctgcaagatg tgcctgaacaagctccatcggaaagcatgtcctttcgaccagaccactatcaatacagac atagaacatcttcctgtgaattcagctttgctgcagcttgtgggtgctcaaatgccagaa cagcaaccaataactctacgcagtggtgttgaagatactaaacattatgaggaagccagg aaatgtgtggaagaactagccttataccttaaaccactcagcagtgcaagaggtgtagga ttgaacagcacaactcagagtgtgcttagtcggcccatgcaaaggaagcttgtgacatta gtccattgccagctggtggaagaagaagggcggatccgagctatgcgtgcagcacgatct ctgggtgaaagaactgttactgagcttattcttcagcaccagaatccccagcaattatct tcaaacctttgggctgcagtgagggctagaggctgtcagttccttggaccagcgatgcag gaggaagccctgaagttagttcttttagctttagaagatggatctgctttatctcgaaaa gtcttggttctctttgtggtacagaggttggagccacgatttcctcaggcttctaaaacc agcattgggcatgttgtccagcttctttacagagcctcctgtttcaaggtgactaaacgt gatgaggattcctccctaatgcagctgaaggaggaattcagaacatatgaagctctgaga agagaacatgattcccaaattgtacaaattgctatggaggctggtttgcgcatagctcca gatcaatggtcttcattgctatatggagaccagtctcacaaatcccacatgcagtccatt attgacaagttgcagaccccagcctcttttgcacaaagtgttcaggaattaacaattgct ctccagaggactggtgatccagctaatttgacccggcttcgaccccatcttgaacttctt gcaaatattgatcctagtccagatgctccaccacccacatgggaacagcttgagaatgga ttagttgctgtacggactgtggtacatgggctggttgattacatccagaatcatagcaaa aaaggagcagatcagcaacagccacctcagcacagcaagtacaagacatatatgtgtcga gatatgaagcagagaagagaatgcccccgtggggccagctgcacatttgcacactcacag gaagaactagaaaaatttcgtaagatgaacaaacgtctagttcctcgaagacctttgagt gcctccttgggtcagctaaatgaagtgggcctgcctgcagcagctattatctcagatgaa gcaacagtggacttacccaatagaaaaccctctaccttgccaaatggaattgtttcacca ggcagtacagtgacacaacttatctctcgtggaaccgactccagttatgactcagtcatg aaacctgggaagatggatcaccatagtagcagtgcccctggatcacctcctgatttgctg gaacctgtttccaagagctctcacccagtgcccccccgaggacctacagacttgcctcca atttcagtaggcaagcagctccaaatagttccccgaggctcccagttgtacccagctcag caaacggatgtgttctatccagatcctcgaggaacagctcccccatttgagcctccaccc tatcaaacaggtgtatattatcctccagctcaatcactacagtgtatgtctcgatttgtc cgacctccatcatctattcctgaaccaggtcctccttttgtagaacaacattatgcaccc tatctccaagatcgcatcatgaactcacaatacagcacacagccacagcaatatcctcca atgagtcaacctgtatatcctccccattatgacagcagacgtgtgtatcctgctgctcag ccataccaacgggaagatattatccgaggaagtcctgttccaattgaaatttctccacct gctgtatcaccatatgtacctgaaacaagagatagatatcaacaagtggagggctactat ccagttggaccacatctgaatcagattagaccttcatatcatagagaaccttatagtcgg gctccccctcagccacaccctagtttagatgaattgcatcgaaggcgaaaggagattatg gctcagctggaagaaaggaaggtcatctccccaccaccatttgcatcatcaccaaccctg cctcattctttacacactgatgagtacttggatgaagacctgaaggtggcaggcaaatac aaaggaaatgattacagccagtactctccctggtcatgtgacactattggctcctacatt ggaaccaaagatgcaaaacccaaagacattgtggcagtgggtcttgtggagatggtgaat gtggacagcaagggaatgcgagatcaacgtttggatttacaaaggagagcagcagagact ggtgatgatgatcttattccctttggagataggcctacagtgtcaaggtttggtgccatc tcacgtacctccaaagcaatgtaccagaatccaggccccatgcaagccatgacagttcaa ggggcttctgcaaaaccagtcagtgtttcagattacagcccatatggaacacacagtgca tggggaggttcaccatactcaccccatcaaaatgtaccttctcagggacggcttggtgac agggagagattatctatgacagacattgctaaccatggaaaatctttgccatcatctgag agagaacagcagcttcgtcttgaactgcagcagttaaaccatcagataagtcagcagaca cgaggacttgaggcggttagtaacaggctgctgttgcagagggaagcgacccctttggca ggccaaccacagcccccaccgccaccacctaagtggcctggaatgatttcaagtgaacag ctgagcttggagctgcaccaggtggagagggaaatcgggaagagaacccgggaactaagc atggagagccagtcttcattggatgtgaaaaacaaagcaaacgctggtaaacagactgaa aatggacagcaaggcaaagtaccacctgaagatctttctctaacattcagtgatcttcca aatggatctgccccaacccaagaaattataggccttctatcaaacaaaactacagctctg agtttgtcagaggacaccgacgcagtagcaggtgaccaggatacccagagaactggagca acgcccacctctgctccttga

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