Ahaetulla prasina (Asian vine snake): 131196259
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Entry
131196259 CDS
T09329
Symbol
TAF4
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
131196259 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apri03021
]
131196259 (TAF4)
03036 Chromosome and associated proteins [BR:
apri03036
]
131196259 (TAF4)
Transcription machinery [BR:
apri03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
131196259 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
131196259 (TAF4)
Chromosome and associated proteins [BR:
apri03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
131196259 (TAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
131196259
NCBI-ProteinID:
XP_058034809
LinkDB
All DBs
Position
3:complement(217777178..217874594)
Genome browser
AA seq
1125 aa
AA seq
DB search
MAAGSDLLDEVFLNAEVDEKVVSDLVGSLESQLAASGHHHPHHKAQEPLRVAGGLLGNHV
VSSGSSSSNSPSPSPGGGGGGGGGVGGNANVQTESPGSRTTGSSSTSSTTTAAAAAKMGL
SGPEITKPGTGGVQGSVINHNARSQGSTLDGTTTTSSSTTTTVQGGSEAAITPGTLNQGK
SVVISTMATALSTRNGKIGTTAVQTLNGSNVVMNSHASFSATPVTANPTVVPAVAPLVNN
GPGNIGKVNAVNAVLPSASNTVIQTSFLGPGVSSASSPSPTVISSQQPPNIGTGGPTVAL
VRPPIHAAGPSLAAATQNGSSTVINSTINVGGFPTATVAAATVGSGVSLQTSLVNSQPGS
GVSAAAPTTQVIKAESPKTIVQAVTQQQTLAAAGQPSTTGGNMIIGQTMQAGLPNVAPNP
GGVPPAPPGTPTGLAKGAANTVAQSLPRTATATTSGIRATLTPTVLAPRLPQPSQNPTNI
QNFQLPPGMVIVRSESGQLLMIPQHALAQMQAQAHAQSQSQTTMTPRPATSTSASPVQLS
TVQVSSLRNAPGTPIIARQVAPTTIIKQVSQAQTTVQPTTTLQRPPVVQPQIVLGSPAQT
TALGTATAVQTGTPQRTVQGATATSTAATETMENVKKCKNFLSTLIKLASSGKQSTETAA
NVKELVQNLLDGKIEAEDFTSRLYRELNSSPQPYLVPFLKRSLPALRHLTPDSAAFIQQS
QHQQPLTQPTTALTAVMLSSSVQRTAGKTTATATSTLQQPVISLTQPTQVGVGKQGQPTQ
VVIQQSQKQGTLIRPPQVTLTQTPMVALRPPHNRIMLTAPQQIQLNALQTVPVVKQTVVP
GTKALSTLSTQAAIAQKNKLKEPGGGSFRDDDDINDVASMAGVNLSEESARILATNSELV
GTLTRSCKDETFLLSTPLQRRILEIGKKHGITEIHPDVASYVSHATQQRLQNLVEKVSET
AQQRNISYKDDERYEQTSDVRAQLKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPE
QLRLKQKAKEMQQQELAQMRQRDANLTALAAIGPRRKRKLDSPGSGSGTEGSSPSVAVPG
CSGIGTTRQFTRQRITRVNLRDLIFCLENERETSHSLLLYKAFLK
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgggtcggatctgctggatgaggttttcctaaacgctgaggtggatgagaag
gtggtgagcgacctggtgggctccctggagtctcagctggcggcctcgggccaccaccac
ccgcaccacaaggcgcaggagcccctcagggtcgccggggggctgctggggaaccatgtt
gtgagcagcggcagcagcagcagcaacagccctagccctagcccaggaggaggaggagga
ggaggaggaggagtaggaggcaatgctaatgtccaaacagagagccccggcagccgcacc
accggcagcagcagcaccagcagcaccaccaccgccgccgccgccgccaagatgggactc
agtggcccggagatcaccaagccaggaaccggtggtgtgcaagggagtgttatcaatcat
aatgccaggtcccagggttctacgttggatgggaccactacaactagcagcagcaccact
acaactgtccaaggtggctctgaagctgctattaccccagggaccctcaaccagggcaaa
tcagtggtaatcagtaccatggcaacagctttatcaaccaggaatggtaaaatcgggacc
actgcagtgcagactttaaatggaagtaacgtggtgatgaattcccatgcttctttctcc
gccactcctgtgacagcgaatcctaccgtggtccctgcggttgcccctctcgtgaacaat
ggacctggaaatattggaaaagtcaatgccgttaacgctgtcttgccatctgcttcaaat
actgttatccagacttctttccttggccctggagtgtcctctgcctcttcaccttcacct
acggtgatctcgtcacaacagccccccaatatcgggaccggggggccaacggtagcattg
gtaaggccgcccattcacgccgcaggaccctcattggctgccgccacccagaatgggagc
agtactgtgatcaattcgaccatcaacgtgggaggttttccgactgcgactgttgctgcc
gccacggttggttcaggggtgtcgctccagacctctcttgtgaacagccagcctggatct
ggggtatcagctgctgcacccaccacccaggtcatcaaagcggagtctcctaaaactatt
gtgcaagcggtcacccaacagcaaactctggctgccgctggccagcctagtactacaggg
ggtaatatgatcattgggcaaactatgcaagctggcctacccaacgtagctcctaatcct
ggcggagtacctcctgcacctccaggtactcccactggtctggctaagggtgctgccaat
acagtggcgcagagcctgcccaggactgcaaccgcaaccaccagtggaatccgagcaact
ttgactcccactgttttagcacctcgtctgcctcagccttctcagaatccaacaaatatt
cagaactttcagttgccaccaggcatggtcattgtacgtagtgagagtggccagctactg
atgatccctcaacatgctttggcgcaaatgcaagcccaagcccatgcacagtcccagtct
caaactaccatgactcctcgccctgccacatctaccagtgcttctccggtccagctttcg
actgtgcaggtcagttccctgagaaatgcaccaggaactcctataattgctcggcaggta
gcaccaaccactataatcaaacaagtgtctcaggcacagacaactgtacaacccacaaca
acgctacagaggccgcctgtagtccagcctcaaattgttctgggtagtcctgcacaaaca
acagcattaggaacagcgactgctgtgcagactggaaccccacaaaggacggtgcaagga
gccacagcaacctccactgctgccacagaaaccatggaaaatgtgaagaaatgcaagaat
tttctctcaacgctaataaaactggcctcttctggaaagcagtcgacagaaactgctgct
aatgtgaaagagctagtccagaacttgctggatggaaagattgaagcagaagacttcact
agtaggttgtaccgggaacttaattcttcacctcaaccataccttgtgcctttcttgaag
cggagcttacctgccttgagacacctgactcctgactcggccgctttcattcagcaaagc
cagcatcagcagcccttgacgcagcccacgaccgctctgaccgccgtgatgttgagcagc
tcggtccagcgtacggcgggaaagaccactgccacagccacgagtaccttgcagcagccg
gtcatcagcctaacgcagcccactcaagtgggagttggcaagcaggggcagcccacgcag
gtggttattcagcagtctcaaaaacaaggcacattaattaggcctccgcaagtgacattg
acccagacgcccatggtggctttgcggccaccccacaaccgtattatgctgaccgctcct
caacaaattcagctgaatgcacttcagacagtccccgtggtaaagcaaacagtagtacca
ggaaccaaagctctttctactctttcaacccaagctgcaattgctcaaaaaaacaaactc
aaagaacctgggggaggctcttttcgggatgatgacgatattaacgacgttgcctcgatg
gcaggagtcaatctatccgaagaaagcgcacgtatattggccaccaattctgaattggta
ggcactttaacaaggtcgtgtaaagacgaaacgtttcttctctcaacacccttgcaaaga
agaatattagaaataggtaaaaagcatggaataacggaaatccatcctgacgtagctagt
tatgtatcacatgcgacgcaacaaaggttacaaaacctggtggagaaagtatcagagact
gcccagcaaaggaatatttcttataaggatgatgaaagatacgaacagacaagcgacgtc
cgggcacaactcaaattctttgaacaacttgatcaaatagaaaaacaacggaaagatgaa
caagaaagggaaatattaatgcgcgcagcaaagtctcgatctagacaagaagatccggag
cagcttagattgaaacaaaaggccaaggagatgcaacaacaggaactagcacaaatgcga
cagagggatgctaacttgactgcattggctgcaataggacccagaaggaaaaggaaactg
gattctccagggtctggatcagggacagagggatccagtccgagtgtagcagtaccagga
tgctccggaatcggaacaaccagacagtttacacggcaaaggataacgcgggtgaacctc
agggacctaatattttgtttagaaaatgagcgagagacgagccattcactattgctctat
aaagcattccttaaatag
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