Ahaetulla prasina (Asian vine snake): 131196394
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Entry
131196394 CDS
T09329
Symbol
COP1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri04115
p53 signaling pathway
apri04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
131196394 (COP1)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
131196394 (COP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
apri04121
]
131196394 (COP1)
Enzymes [BR:
apri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131196394 (COP1)
Ubiquitin system [BR:
apri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131196394 (COP1)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
131196394 (COP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
zf-C3HC4_2
Beta-prop_EIPR1
WDR55
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
zf-C3HC4
Beta-prop_CAF1B_HIR1
zf-RING_2
zf-RING_UBOX
Beta-prop_EML
Beta-prop_DCAF4
zf-C3HC4_3
zf-RING_5
Beta-prop_WDR90_POC16_2nd
zf-C3HC4_4
WD40_RFWD3
RING_XB3-XBAT31
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
WD40_like
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_IFT122_1st
zf-rbx1
zf-RING_10
zf_C2H2_10
zf-RING_11
Sina_RING
Motif
Other DBs
NCBI-GeneID:
131196394
NCBI-ProteinID:
XP_058035156
LinkDB
All DBs
Position
3:complement(121814673..121950165)
Genome browser
AA seq
711 aa
AA seq
DB search
MSGSRPSPQHPPAGPGAAGPPGSSSTSSVTTSACLGTTMATGPAMASGSSAVPSRPVLVA
PAVSGSSCSGGLSRLAGTRVGSGSGAAGSGLRKRPLLTPLCNGLLNSYEDKSNDFVCPIC
FDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQR
FEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAESHAA
QLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMSGLYSPVSEDSTVPQFEAPS
PSHSSIIDSTEYSQPGFSGSSQTKKQPWYNSTLASRRKRLTAHFEDLEQCYFSTRMTRLS
DDSRTSNQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAG
VTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDG
FTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCC
VKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDS
QLKLWNVGKPHCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKF
DTVKSVLDKDRKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIKVLELV
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgtccggaagcaggccgtcgccgcagcaccctccggccgggccgggtgctgcgggccct
cccggctcctcctcgacctcctcggtcaccacctcggcctgcttgggcaccacgatggcg
acaggccccgcgatggcgtcgggctcttcagccgtcccctcgcgacccgtgttggtggcg
cccgccgtgtccggatcttcctgcagcggaggcctttctcgcctggcggggacccgagtc
gggagcggcagtggcgcagctggcagcggcctcaggaagaggccgcttctgactccgctt
tgcaacggccttctgaattcctacgaggacaaaagcaacgatttcgtctgccccatctgc
tttgatatgattgaagaagcttatatgacaaaatgtggacacagtttctgttacaaatgt
attcatcaaagcctggaagataacaacagatgtcctaaatgtaattatgttgtggataac
attgatcatctatatcccaactttttagtgaatgagctcatccttaaacagaagcaaaga
tttgaggaaaagagattcaaattggaccattcagtgagtagcaccaatgggcacaggtgg
caaatatttcaagatttgttgggaacagaccaagacaatcttgatttggccaatgttaac
ttaatgttggaacttctggtgcagaagaaaaaacaattggaggcagagtcccatgctgcc
cagctacagattttgatggaattcctcaaggttgccaggagaaataagagagagcagtta
gagcaaatccagaaggagctgagtgttttggaagaagatattaaacgagtagaggaaatg
agtggcttgtattcaccagtcagtgaagatagcactgtgccccagtttgaagcgccatct
ccttcacacagtagcattattgattctacagaatatagccaacctggatttagtggcagt
tcccagactaagaaacagccatggtataatagtactttagcttcaaggaggaagagactt
acagctcattttgaagatttggaacaatgctacttttctaccaggatgactcgtctatca
gatgatagtagaacctcaaaccagctggatgaatttcaagagtgcctgtctaagtttact
cgctacaattctgttcgacctttggcaacactatcttatgcaagtgatctctacaatgga
tcaagcatagtctcaagtattgaatttgatcgagattgtgactattttgctattgcggga
gtcacaaagaagattaaagtctatgaatatggcacagtcatccaggatgcagttgatatt
cattatccagaaaatgaaatgacatgtaattccaaaatcagctgtatcagctggagtagt
tatcacaaaaaccttttggccagcagtgactatgaaggaacagtgatcttatgggatgga
ttcacagggcaacgttcaaaggtctatcaggagcatgagaaaagatgctggagtgtggac
tttaatttgatggatcctaaactcttggcttcaggttctgatgatgcaaaagtgaagctg
tggtcaaccaacctggacaattcagtagcaagcattgaggccaaggcaaatgtgtgttgt
gtaaaattcagcccctcatccaggtatcaccttgcttttggttgtgcagatcactgtgtc
cactactatgatcttcggaacactaaacagcccattatggtcttcaaagggcaccgcaaa
gctgtttcatatgcaaagtttgttagtggagaagagatagtctctgcgtcaacagatagc
cagctaaagctatggaatgtagggaagccacattgtttgcgttcttttaagggtcacatc
aatgagaagaattttgtaggcttggcatctaatggagactatattgcctgtggaagtgaa
aataattcactttacctgtactataaaggtctctcaaagacactgctaaccttcaaattt
gacactgtcaaaagtgtcctggacaaagaccgtaaggaggatgacacaaatgaatttgtc
agtgctgtatgctggagggcactaccagatggggagtccaacgtattgattgctgctaac
agtcagggtacaattaaggtactggaactggtatga
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