Ahaetulla prasina (Asian vine snake): 131196571
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Entry
131196571 CDS
T09329
Symbol
SDC1
Name
(RefSeq) syndecan-1
KO
K06257
syndecan 1
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri04512
ECM-receptor interaction
apri04514
Cell adhesion molecule (CAM) interaction
apri04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
131196571 (SDC1)
04514 Cell adhesion molecule (CAM) interaction
131196571 (SDC1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
131196571 (SDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
apri04131
]
131196571 (SDC1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
apri04090
]
131196571 (SDC1)
00535 Proteoglycans [BR:
apri00535
]
131196571 (SDC1)
Membrane trafficking [BR:
apri04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
131196571 (SDC1)
CD molecules [BR:
apri04090
]
Proteins
131196571 (SDC1)
Proteoglycans [BR:
apri00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
131196571 (SDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
131196571
NCBI-ProteinID:
XP_058035459
LinkDB
All DBs
Position
1:complement(160245989..160277503)
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AA seq
326 aa
AA seq
DB search
MRVSAIAGLSALVFCFQAVFAQPMDISLPPEDQDSSGDDDDSFSGLSSGAGSPIEDEVIA
YNVPLQESTNTSLMPEVSTSFRDAQTKVQVTDSPAEDYSRVPVSTASIPEFPDTAVVSKE
PPVTLEGFDSITEPDTTKPAALTTSLPIAHHVSTARITTSRAASTVKFIDIQDESNIDET
RSLGMVPESERNLNSALPTVVSSTAVTDNSPLPENDGFQEYGSGDQGDFIFSTHEENQMN
AKDVETENRMADTEAKDAKSEGLMDRKEVLGGVIAGGLVGLLFAGFLVAFMLYRMKKKDE
GSYSLDEPKQSNGGYQKPHKQEEFYA
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagggtcagcgcgatagcggggctgagcgctttggtcttttgcttccaagcggtcttc
gcgcaaccaatggacatcagtctaccccctgaggaccaggattcatctggagatgacgat
gattcattttctggtttatcatcgggtgcaggttctccgatagaagatgaagtgattgcc
tacaatgttccattacaagaaagcacaaatacttctctgatgcctgaagtttctaccagc
tttagagatgctcaaacaaaggttcaagtaacagacagccctgcggaagattattcaagg
gtacctgtctctacagcaagcatacccgagtttccagatactgctgtcgtatccaaggag
ccaccagtaactctcgaaggctttgactcaattacggagccagacacaacaaaacctgct
gcgttgacaacaagcctcccaatagcacatcacgtttccacagccagaattacgacttct
cgggctgctagcacagtcaaattcattgatattcaagacgaatctaatattgacgaaaca
cgctcgcttggcatggtgccagaaagtgagagaaatttgaatagtgccctacccactgta
gtgtcttctactgctgtaacggataactctccactacctgaaaatgatggcttccaagaa
tatggttctggtgatcagggagattttatattttcaacacatgaggaaaatcaaatgaat
gcaaaggacgttgaaacagaaaataggatggccgatacagaagccaaggacgcaaaatcc
gaagggttaatggacaggaaagaagtgctaggaggagtcatcgctggtggactcgtaggc
ttactctttgctggattcctagttgcattcatgctatatagaatgaagaaaaaagatgaa
ggaagttattcattggatgagccaaaacaatcgaatggaggctatcaaaaaccacacaag
caagaagaattctatgcatga
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integrated database retrieval system
