Ahaetulla prasina (Asian vine snake): 131196597
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Entry
131196597 CDS
T09329
Symbol
DHX8
Name
(RefSeq) ATP-dependent RNA helicase DHX8 isoform X1
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131196597 (DHX8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
apri03041
]
131196597 (DHX8)
Enzymes [BR:
apri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
131196597 (DHX8)
Spliceosome [BR:
apri03041
]
Complex C
Other components
Step II factors
131196597 (DHX8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
nSTAND3
Flavi_DEAD
T2SSE
AAA_16
Cas3-like_C_2
ABC_tran
PhoH
TsaE
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
131196597
NCBI-ProteinID:
XP_058035539
LinkDB
All DBs
Position
4:complement(53844606..53888234)
Genome browser
AA seq
744 aa
AA seq
DB search
MMQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDVDGRQIAANMRGIGMMPNDIP
EWKKHAFGGNKASYGKKTQLSIIEQRESLPIFRLKDQLIQAVHDNQILIVIGETGSGKTT
QITQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPET
VIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVT
SATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDI
LVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVV
IATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGP
GKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLIT
AMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN
VFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQ
DIRKQMLGIMDRHKLDVVSCGKATVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIH
PSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQ
RLEPLYNRYEEPNAWRISRAFRRR
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaagtgcacttgctaaagagaggcgggaactgaagcaagcccagcgggaagca
gaaatggattctattcccatggggctcaacaaacactgggtggatccccttccagatgtg
gatggaaggcaaattgcagctaacatgcggggtattggcatgatgcccaatgacatacct
gaatggaagaagcatgcttttggaggcaacaaggcttcttatggcaaaaagacacaactg
tcaataattgaacagcgagaaagtcttccaatttttcgtctgaaagatcaactcatccag
gcagttcatgataaccagattctgattgtcattggtgagactggctctgggaaaactaca
cagatcacacagtaccttgctgaagctggctacaccacccgtgggaagattggctgcact
cagcctcgtcgagtggctgccatgtctgttgctaagagggtttcagaagaatttggttgt
tgtctaggacaagaggttggttatactatccgatttgaagattgcactagccctgaaact
gtgatcaagtacatgacagatggaatgctgcttcgtgaatgcctcattgatccggatctg
acacagtatgcaattataatgttggatgaagcccatgaacgcactatacatactgatgta
ctctttggtctcctaaaaaagacagttcagaagagacaagacatgaaattaatagtgacc
tcagctacactggatgcagttaaattctctcagtatttctatgaggctcctatctttacc
attcctggtaggacatacccagtcgagattctctacaccaaggaacctgagacagattac
ttagatgccagcctgattacagtcatgcagatccacttgacggaacctccaggagacatc
ttggtgttcttgactggccaggaagaaattgatacagcttgtgaaattctctatgagcga
atgaagtccctcggcccggatgttcctgagctgataatcttgcctgtttattcagcacta
cctagtgagatgcagacgcggatctttgacccagctcccccaggaagtcgaaaggtggtc
attgccacaaatattgctgaaacttcacttacaattgatggtatctattatgtagttgat
cctggttttgtaaagcagaaagtgtacaactccaagactgggattgaccagctcgttgtg
acaccaatttctcaggcccaagctaagcaacgagctggaagagctggaagaacaggccct
ggcaagtgctaccgactctacactgagcgggcctaccgtgatgagatgttgaccaccaat
gtacctgagattcagagaactaatctggcaagcaccgtattatctctcaaggctatgggt
atcaatgatttgctgtctttcgattttatggatgcccccccaatggagactctgatcact
gcaatggagcaactgtatactctgggagctttggatgatgaagggctgctcactcgactc
ggacgcaggatggcggagtttccactggagcctatgctttgcaagatgctcattatgtca
gtgcacttaggttgcagtgaggaaatgctcaccattgtctcaatgctgtctgtgcaaaat
gttttctatcgaccaaaggacaagcaagctcttgctgaccagaagaaagctaagttccac
caaactgaaggagatcatctcacacttttggctgtttacaactcctggaagaacaataag
ttctccaatccctggtgctatgaaaattttatccaagcccgctcactacgtcgtgcccag
gatattcgtaagcagatgctgggaataatggataggcacaagttagatgtggtatcttgt
ggaaaagcaacagtacgagtccagaaagccatttgcagtggtttcttccggaatgcagcc
aaaaaggacccacaagagggctaccggaccttgattgatcagcaagtggtctatatccat
ccctcaagtgccctcttcaaccgccagcctgaatgggtggtgtaccatgagcttgtgctc
acaaccaaggagtatatgagagaggttaccaccatagatccccgctggcttgtggagttt
gccccagcctttttcaaggtttctgatcccacaaagctaagcaagcaaaagaagcagcag
cgcctggagccactttacaatcgctatgaagagcccaatgcctggaggatatcacgggca
ttcaggcgtcgatga
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