Ahaetulla prasina (Asian vine snake): 131196619
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Entry
131196619 CDS
T09329
Symbol
TOPBP1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1 isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
131196619 (TOPBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apri03032
]
131196619 (TOPBP1)
03400 DNA repair and recombination proteins [BR:
apri03400
]
131196619 (TOPBP1)
DNA replication proteins [BR:
apri03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
131196619 (TOPBP1)
DNA repair and recombination proteins [BR:
apri03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
131196619 (TOPBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
131196619
NCBI-ProteinID:
XP_058035606
LinkDB
All DBs
Position
4:85923175..86022149
Genome browser
AA seq
1506 aa
AA seq
DB search
MKDSKEPYFVKFVKTPESSECFLQALESIKEFQSEECLILDKEAALRIQENDKSLYICDQ
FSDIVFNHLQKLGCRIVGPQVVIYCMQNQRCVPKADHPVFNMTMADVTISCTSLPKETRE
EVHEYVQLMGGRVYRDLNVLVTHLIAGEVGSKKYLVAANLKKPILLPTWIKALWDKSQHS
LVFKRITRYTDVNMGEFLCPPFLGCTICVTGLSSMDRQEVQRLTTENGGQYTGQLKMNEC
THLIVQEPKGQKYECAKRWNVHCVSMQWFFDSIEKRFCQDESMYLIVPSTNQDSAPSTST
PTSQASKPDSRTLSDVSHISNINLSDINETSCSSILNSRLDPSPDDLNNLNISSLQARED
LLDGCRIYLCGFSARKLDKMKKLINSGGAVRFNQLNEDVTHVIVGDCDDELKQFLKKTER
SNRPHAVTVQWILECFRKGYLIPEEQYAPASYQQANIPSSEAPFILKKNNMLKKEHVNTV
AAADIDEELLSQYVTHDSKVVHFDDRIETDHTVFQDGKEVTVSSLAESSLVVEGALFSGK
KFLILGFSKADESCIKALIEENAGKVLLQEKRVIADYAVVPLLGNKVVSTVEDVVTNTWL
VMCIEQQTLIDPQSSPLFSPVPVKEGATPLQHFVLSFSQFSGAERESLICLASQLGARVQ
EFFVRRANPKKGMLVSTHLVLKQPDGSKYEAAKKWNLPAITMAWLLESARMGKKADESKF
LIENIDNKDKQKNFTNSSEEMETSIAPTNISDYPSNVLETGKVTTVTPLDVNRFQSKAFQ
SVISQHIGKNSSPPIGSKVVQKEPSLHLDTPSKFLSKDKLFKPSFDVKDALAVLETPDAP
NQENTNLSTPLSEVIGRNLKLALANSTRQTVAITASPQLRASSWQMEEESKPLADVVICV
SKKLSKKQSELNAIAASLGAEYRWCFDETVTHFIYQGRQNDNNREYKSAKERGIYIVSEH
WLLESAQEYKRLAESLYPHTYNPKMSLNISGVEDDRFSQRLDAAGKEGKGDKNKSLNDKD
TKKVILDQINEVEQKEHEPKGVLTQTLEMRATFQKQLQEIMTATSLVKLQGQRNSLSRNG
FENPPSTPDGPRSARNCRSRILEALRQSHHGATDVNTEPSQNEQIIWDDPTAREERARLA
SNLQWPNSPSQYSEQIQTTAVPPGDLSVRKSLSDTDIIEIGINDSTKIDSVGVASLLIRN
PETSIKEDHLIPTPLAPAIAFPLANPPVAPQPKGDVTKIDQRDYEEPTKMHRFQLSSLNP
QERINYYQLIEELGGVVLEKQCFDSSCTHTIVGQPLRNEKFLASMAAGKWVLHRSYLEAC
RAAHSFVKEEDYEWGSNSILSVLTGINVVQKKLAVAAMRWRKTIQRRREQNSSAEGAFGG
WRVILNVDPAKESGFKRLLESGGAKVLSAYSPPIFREVTHFFADLNKLKPEDLRINIREA
TAKGVNCLKPEYIADYLIQEPPPSMENYHLPEAAAYLQNSKILGIGLSQKRKAAEEKHTA
KRSRIH
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatagcaaggagccatattttgtgaaatttgtaaaaactccggaaagttcagag
tgttttcttcaagcccttgagtccatcaaagaatttcagtcagaagaatgtctgattctt
gataaggaagctgcacttagaatacaagagaatgacaaatccctttatatatgcgatcag
tttagtgacattgtttttaatcatcttcaaaagcttggttgtaggattgtgggaccacag
gtagttatctactgcatgcagaatcaacgatgtgttccaaaggctgaccatccagtattt
aatatgacaatggctgatgtaacaatatcttgtacaagtcttccaaaggaaacaagggag
gaagtccatgaatatgtacagttgatgggtggtcgtgtatacagagatcttaatgtgtta
gtaacccaccttatagctggagaagttggaagcaagaaatacttagtcgctgctaattta
aaaaaacccattttgcttcccacttggataaaagcactatgggataaatcacagcacagt
cttgttttcaaaaggatcactagatacacagatgtaaatatgggagagtttctgtgtcct
ccatttcttggctgtacaatctgcgtaactggtttaagcagtatggatagacaagaagtc
cagcgtctcaccactgagaatggtggtcaatatacagggcaactgaagatgaatgaatgt
acccaccttattgttcaagaaccaaaaggccagaaatacgaatgtgcaaaacggtggaat
gttcattgtgtatccatgcagtggttttttgacagcattgaaaagagattttgccaggat
gaatcaatgtatttgatagttcctagcacaaaccaagatagcgcaccaagcacttcaact
cctacaagtcaagctagcaagccagacagtcgaacactttcggatgttagtcatatttca
aatatcaacttaagtgacattaatgaaacatcatgtagttctattttgaatagcagactg
gatccttcgcctgatgatctgaacaacctgaatattagttctttgcaagcacgtgaggat
ttactggatggatgccgaatttatctttgtggctttagtgccagaaaattagataaaatg
aaaaagctgattaactctggtggtgctgttcgttttaatcaactaaatgaagatgtgaca
catgttattgtgggggattgtgatgatgaattaaaacaatttttgaagaagacagaacgg
agtaacaggccacatgctgtgacagtacaatggattttggaatgctttagaaaaggttat
ttaatacctgaagagcaatatgcccctgcaagttatcaacaagcgaatattccatcttct
gaggcgcctttcatcttaaaaaaaaataacatgttgaagaaagaacatgtgaatactgtg
gcagctgcagatattgatgaagaattgctatctcagtatgttactcatgattccaaagta
gttcattttgatgaccgcattgaaacggatcatactgtatttcaagatggaaaagaggtc
acagttagttcgttggcagagtcttctttagttgttgaaggagccttattcagtggaaag
aagtttctgattcttggttttagtaaagcagatgaatcttgcattaaagctctgattgaa
gagaatgctgggaaggttctgctccaggaaaaaagagtaattgctgattatgctgttgtt
cctcttctgggaaacaaggtcgtatcaactgtagaagatgtggttacaaacacatggctg
gtgatgtgtatagaacaacagactctgatagatcctcaatcaagtccacttttcagccca
gtgccagtgaaggaaggagccaccccattacagcattttgtgttgtctttcagtcagttt
agtggagcagagagagaatctttaatatgtttggcaagtcagcttggggcaagagttcag
gaattctttgtgagaagagccaacccaaagaaaggaatgcttgtcagcactcatctggtg
ctaaaacagccagatggctctaaatatgaagcagcaaagaagtggaatcttcctgccatt
actatggcttggctattggagtctgctaggatgggaaaaaaggctgatgaaagcaaattc
ctgattgagaatatagacaacaaagataaacaaaagaactttacaaattcttcagaagaa
atggagacaagtattgcacctacaaatatatctgattatcctagtaatgtccttgaaact
ggaaaggtaacaacagtgacacccctggatgtgaatcgtttccaaagtaaagctttccaa
agtgttatttcacagcatattggtaaaaattctagccctccaattggaagcaaagtagta
cagaaggaaccctctctgcatctggacacaccatctaaatttttatcgaaagacaagctc
tttaaaccttcttttgatgtcaaggatgctttggcagttttggaaactccagatgctcct
aaccaagaaaatacaaatctaagtactcctctttcagaagtcattggcaggaatttaaaa
ctagctttggccaacagcacacgtcaaacagttgctatcactgccagtccgcagctaaga
gcttcaagctggcaaatggaagaagaatcaaaacctttagcggatgttgtcatatgtgtg
agtaagaagctcagtaaaaagcagagtgaattgaatgctattgctgcatctcttggagct
gagtacaggtggtgttttgatgaaactgtaacacatttcatctaccagggaaggcaaaat
gataacaaccgagaatacaaatctgctaaagaaagaggcatatatattgtttcagagcat
tggctcttggagagtgcacaagaatacaaacgattagctgaatctctttatcctcataca
tataatcctaaaatgagtttgaatattagtggtgtggaagatgacagattctcacaaagg
cttgatgctgctggaaaagaagggaaaggagacaaaaataagtcactgaatgataaagat
acaaaaaaagttattcttgatcaaataaatgaggttgaacaaaaggagcatgaaccaaaa
ggagttttaacacagacactggaaatgagggcaacctttcagaagcaactccaagaaatc
atgactgccacatcattagtaaagttgcaaggacaaaggaactctttatctcggaatggt
tttgagaatcctccatcaactccagatggaccccgttctgctcgtaattgtcgcagtaga
attttggaagctttaaggcagtcacatcatggagcaactgatgtcaatactgagccatcc
cagaatgaacagataatttgggatgatcctacggcaagagaggagagagcaaggcttgcc
agcaacctacagtggcctaatagtccttcacagtattcagaacaaattcaaactaccgca
gtgcccccaggagacctttcagttagaaagtctttgagtgatacagatattattgaaata
gggattaatgattcaacgaaaattgattcagtaggggtcgcaagtcttctaattagaaat
ccagaaacatcaataaaagaagatcatctgatcccaactccattggctcctgctattgct
tttccattggcaaatcctcccgtcgctccccagccaaaaggagatgtcactaaaattgac
caaagggactatgaagaaccaacaaagatgcacagatttcagctctcttctcttaatcct
caagaacgaattaattattaccagctaattgaagaactagggggagtggtgttggagaag
caatgctttgattcgagctgtacacacacaattgtgggacagcctcttcgcaatgagaaa
ttcttggcttcaatggcagcaggaaaatgggtgcttcatcgttcctatttggaagcatgc
agagcagcacacagctttgtaaaggaggaagattatgagtggggaagtaactctatactt
agtgtactgactggaatcaatgtagttcagaagaagttagcagttgcagcaatgagatgg
agaaagacaatacaacgacggagagagcaaaacagctctgctgagggagcatttggtggt
tggagagttattttgaatgttgatccagcgaaggaatcaggcttcaagcgtcttctagaa
tcaggaggtgcaaaggtgttatctgcatattctccacctatctttagagaagttactcat
ttttttgctgatcttaataaactaaagccagaagatttgagaattaatataagagaggct
acagctaaaggagtgaattgtctgaagccagaatacattgctgactacctgatacaggaa
ccaccaccttcaatggaaaactatcatttaccagaagctgctgcttatcttcagaatagt
aaaatacttggaattgggttgtctcaaaaacgtaaagctgctgaagaaaagcatacagca
aagagatccagaattcactga
DBGET
integrated database retrieval system
