Ahaetulla prasina (Asian vine snake): 131196636
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Entry
131196636 CDS
T09329
Symbol
VPS41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri04140
Autophagy - animal
apri04148
Efferocytosis
apri05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
131196636 (VPS41)
04148 Efferocytosis
131196636 (VPS41)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
131196636 (VPS41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
apri04131
]
131196636 (VPS41)
Membrane trafficking [BR:
apri04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
131196636 (VPS41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
WD40_CDC20-Fz
ANAPC4_WD40
WD40_Prp19
zf_RING_Vps8_fungal
Beta-prop_HPS5
zf_RING_Vps8
Beta-prop_EML_2
zf-RING_11
zf-RING_2
WD40_WDHD1_1st
Vps39_1
Beta-prop_RIG_2nd
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
131196636
NCBI-ProteinID:
XP_058035663
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Position
4:69871445..70131053
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AA seq
872 aa
AA seq
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MPNDTYFRHSHMIVSRIVMAETAEKESVTDEETTDESEEDISEEEPKLKYERLSNGVGEI
IQKDITSCMTTHEKFLALGTHYGKVYLLDVQGNITQKFDISPVKINQISLDESGEHMGVC
SEDGKVQVFGLYTGEEFHETFDCPIKIVAVHPQFVRSHCKQFVTGGNKLLLFEKNWMNRW
KHSVLHEGEGPIRSVKWRGNLIAWANNMGVKIFDMIAKQRITNVPRDDISLRPDMYPCSL
CWKDNLTLIIGWGNSVKICSVKERHASEMRDLPSRYVEIVSQFNTEFYISGIAPLCDQLV
ILSFVKEISEKMERECCARPRLDIIQPFPESCEEISSDALTVRCFQENECRDYCLEYSEG
ESLFYIVSPSDVVVAKERDQDDHIEWLLEKKKYEEALMAAEISQKTIKKHKIQDIGLAYI
NHLLEIGDYDLAARKCQKILGKNTNLWEREVYRFKEIGQLKAISHYLPRQDSILKPFIYE
MVLHEFLESDYEGFATLIKEWPGNLYNNPIIVHAVLDHLKKDPQNRTLLKTLAELYTYDQ
RYRKALEIYLTLRHKDVFQLIHKHNLFSSIRDKIVLLMEFDSEKAVDMFLDNEDKISIDK
VVEELKDRPELQHVYLHKLFKRDHHKGQKYHEKQISLYAEYDRPNLLPFLKNSTHCPLEK
ALEICQQRFFVEETVYLLSRMGNSRSALKMIMEDLNDVDKAIEFAKEQDDAELWEDLILY
SIDKPPFITGLLNNIGTHVDPILLIHRIKESMEIPNLRDSLVKILQDYNLQILLREGCKK
ILVADSLSLLKKMHRTQMRGVLVDEENICEICLSPILPTDASKSFSVIVFHCRHMFHKEC
FPEPNTESSLHFCNICSAKHRGPGSAILEMKK
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgccaaatgacacttacttccggcattctcacatgattgtctcacgtatcgttatggcg
gaaactgcggaaaaggagtctgtgactgatgaagaaacaacagatgagtctgaggaagac
atcagcgaagaagagcccaaattgaagtatgaaaggctttctaatggagttggagaaatt
attcagaaggatataaccagttgtatgacaacccatgagaaatttttggcacttggaaca
cattatggcaaagtttatttgttagatgtccaggggaacatcacacagaagtttgacatt
agtccagtcaagatcaatcagattagccttgatgaaagtggtgagcacatgggtgtgtgt
tctgaagatggcaaggtgcaggtatttggattatacacaggagaagaattccatgaaaca
tttgattgtccaattaaaattgttgctgttcaccctcagtttgtgagatcgcattgtaag
cagtttgtaacaggaggaaacaaattattgttatttgaaaagaattggatgaatagatgg
aagcattctgttttacatgaaggagagggacctataagaagcgtgaaatggagaggaaat
ctgattgcatgggccaacaatatgggcgtgaagatattcgacatgattgctaagcaaaga
atcaccaatgtgccaagagacgatataagccttcgtcctgatatgtatccctgtagcctt
tgctggaaagataatttaacactgattattggctggggaaattcagtaaagatatgttca
gtgaaagaacgacatgcaagtgaaatgcgggatctacctagtcgttatgtggaaatagtg
tctcagttcaacactgaattttatatcagtgggattgcacctctctgtgaccagcttgtc
attctttcatttgtaaaggagatttcagagaaaatggaaagagaatgttgtgcccgacca
agacttgatataattcaaccatttcctgaatcttgtgaagaaatatcttctgatgcactc
acagtaagatgcttccaagaaaatgaatgtcgagattattgtttagaatattctgaaggt
gaatcacttttttatattgtcagcccaagtgatgtggtagtggccaaagaacgagatcaa
gatgatcacattgaatggctgttggagaaaaagaaatatgaagaagctttgatggcagct
gagatcagtcagaaaactattaaaaagcacaagattcaggatataggtttagcatacata
aaccatctattagaaattggagattatgatttagccgcaagaaaatgtcagaagatactt
ggcaaaaacacaaatttatgggaacgtgaagtatatagatttaaagaaattgggcaactt
aaggcaattagccactatttgccaagacaagattcaatcctgaagcctttcatttatgaa
atggttctgcatgaatttctagaaagcgattatgagggttttgcaacattgattaaagaa
tggcctgggaacctgtacaacaatccaatcattgtccatgctgtattggaccatctgaag
aaagatccacagaacaggacattgctgaaaactctagcagaattgtacacctatgaccaa
cgctatagaaaggcccttgaaatttacctcacactgagacataaagatgttttccagctg
atccacaaacacaatcttttcagttccatcagggacaaaattgttctactaatggagttt
gattcagagaaagccgttgacatgtttttggataatgaagacaaaatctcaattgataaa
gttgtggaagaattaaaagataggcctgaattgcagcatgtgtatttgcataaactgttc
aagagagatcatcataaaggacaaaagtatcatgaaaaacaaatcagcctgtatgctgaa
tacgaccggccaaatttacttccttttttgaaaaatagcacccattgcccattggaaaag
gctcttgaaatttgtcagcaaagattctttgtggaagagactgtttatcttttgagtcga
atgggcaatagtcgaagtgccctgaaaatgatcatggaagacctaaatgatgtagataaa
gctatagagtttgctaaagagcaagatgatgctgaactttgggaagaccttattttgtac
tcaatagacaaacctccttttattacaggtttgttaaacaatatagggactcatgttgac
cctattctcctgattcatcgtattaaggaaagtatggagattccaaacctgagagattca
ttagtaaagattcttcaggattataatttgcagattttgcttcgagaaggatgcaagaag
attcttgtggctgactctctttcattgttgaaaaagatgcaccgaacacaaatgcgtgga
gtacttgtagatgaggaaaatatctgtgaaatatgcctttctcctatactgcctacagat
gcatctaaatctttcagtgtaatagtatttcattgcaggcatatgttccacaaagaatgt
tttcctgaacctaacacagaatcttcattacacttctgtaatatttgcagtgctaaacac
cgtggaccaggcagcgccatcttggagatgaaaaaataa
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