Ahaetulla prasina (Asian vine snake): 131196896
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Entry
131196896 CDS
T09329
Symbol
CHD8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8 isoform X1
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
131196896 (CHD8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
apri03036
]
131196896 (CHD8)
Chromosome and associated proteins [BR:
apri03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
131196896 (CHD8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
HTH_Hrp3
MUN
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
131196896
NCBI-ProteinID:
XP_058036318
LinkDB
All DBs
Position
4:11198307..11330998
Genome browser
AA seq
2481 aa
AA seq
DB search
MADPIMDLFDDPNLFGLDSLTDESFNQGAPDPIEEALGLSGATLDSLGGGSKDQQVTPQP
EPSQPQTLPLADTRPESVTESPQQDQPGLLQVPQDQEVLSQGNPFMGVSSAATTSTVTPS
LSAGGQQTAVPPPAPKIVILKAPAGSSMTGAHVAQIQAQPIGAANGGKVTFAKVLTGTPL
RPGVSIVSGNAVLATKVSPGAGAPATLHRLVQPGRPVKQLVLQPVKSQAGGNTGVAPLKP
AVTLTSTPAQVSTQFFQGESKRITLVLQQPPAAGNAPGQRQVVLGSLPGKIVLQGNQLAA
LSQAKGVPGQPAKVVTIQLQVQQPGQQQQSSGQPGTQKIQLLQPTTAGASGQQTPLGVPA
VQQAQVVGGTGQRVTVPVKVVLQPQASSSQGSSSGLSVVKVLSSSEVAALPSSSGTRSSS
DESRKLEHQKKQEKANRIVAEAIARARARGEQNIPRVLNEDELPSVRPEETGERKRRRKG
GGERIPKEDRPRKGRGQAGSGKSKGRGKPSTITPVVGKKRKRNASSDNSDAEVMPAQSPR
EEEEASIQKRRSNRQVKRKKYTEDLDIKITDDEDDEELDVTGPIKTEQLPAPEPPAPEPI
PEGETLPSMQFFVENPSEEDAAIVDKVLSMRVVKKELPNGQYTEAEEFFVKYKNYSYLHC
EWATIAQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEVDRILDESHSIDKDN
GEPVIYYLVKWCSLPYEDSTWELKEDVDEGKVREFKRIQSRHPELKRVARPQAGSWKKLE
LSHEYKNGNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLEEVYNVGIRG
PFLVIAPLSTITNWEREFNTWTEMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKF
DALITTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPL
QNTVEELFSLLHFLEPSQFPSESEFLKDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKN
LAPKQETIIEVELTNIQKKYYRAILEKNFNFLSKGAGHSNMPNLLNTMMELRKCCNHPYL
INGAEEKILTEFRDSCHHHVPHDFPLQAMVRSSGKLVLIDKLLPKLKAGGHKVLIFSQMV
RCLDILEDYLIQKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT
AADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDK
AVLQSMSGREGSITGIQQFSKKEIEDLLRKGAYAAIMEEDDEGSKFCEEDIDQILLRRTT
TITIESEGKGSTFAKASFVASENRTDIALDDPNFWQKWAKKADLDLDLLNSKNNLVIDTP
RIRKQTRHFSTLKDDDLVEFSDLESDDDDRPRSRRHDRHHHPLHHSYGRTDCFQVEKQLL
VYGWGRWREILSHGRFKRRMSERDVETICRAILVYCLMHYRGDENIKGFIWDLISPVENG
KAKELQNHSAPALSSLPVPRAGLSIPVPRGRKGKKVKSQTTFDLQKAEWIHKYNPDTLFQ
DEGYKKHLKHQCNKVLLRVRMLYYLRQEVIGDQAEKVLAGAVSSETDIWFPLVDQAEVPT
AWWDTEADKSLLLGVFKHGYEKYNTMRADPALCFLEKAGRPDDKAIAAEHRPDVGEGVDF
DKDCEDPEYKPVGAPAKEHDEEGEALMMMDEDISVVDGEEGQPGNLFWPPASALTARLRR
LITAFQRSYKREQLKMEAAERGDRRRRRCEAAFKLKEMVRREKQQRWTRREQSDFYRVVS
TFGVEYDPDTMRFHWSRFRTLARLDKKTDESLAKYFHGFVAMCRQVCRLPPAASDESPDP
TLFIEPITEERASRTLYRIDLLRRLREQVLCHPLLEERLALCQPPGLEMPPWWQCGRHDG
ELLRGVARHGLSQTDTTIMQDPDFSFLAARLSHMHSRAGGTGTPPLPPPGPAQPTGLPLP
GVSTAATPSPLLLAPPLNEPPAPPQPLALPPKPESAEDSDSELDLSKISASSSCSSSSGC
SDDSEGEEASCGGKLFEEEESSLLSLPTSHEGNSPQPSASDLLLQERQRAHEWPKDRVLI
TRIDLVCQAVLSGKWPSPQQGQVVSCVGQGEGLPHLHGEYTTSPIPHICPLASQEEGTVS
FTRLRHGGQEKEFTVQIKDEEGIKLTFQKHKLIPNGTVRDRPALTQKKSSKKMVELELQC
LEALRGPDIDLEAHIPVVNKTDGTLLVGDAAPRRADLEVWLQAHPEYAVDPRFLAYMEER
RKHRWPRFPKPVPIEPSCLVGLERMQVAGISANGKKGFLPDPTMNRLLPGAVGSDNTQKR
GRQTPMEFSNMMALMGAGRVQLGATGPLSLHHHAHFQTTPAHGSTLQYMPFPAAAAAAAA
ATAATTSGTLLHPGLGHAGYAAAPLHLGHPQRVDEDEEEDEMDDLSQGYASSERDFSLLD
DDPMMPANSDSSDEGEEEGED
NT seq
7446 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccccatcatggacctctttgacgatcctaacctctttggcttggactcattg
accgatgagagctttaaccagggcgctccggatcccattgaagaagccttggggctttca
ggggccaccctagactccttaggggggggctccaaagaccagcaggttacccctcagccg
gagccttcccaaccacagaccctgccccttgccgatacgcgaccggagtccgtgaccgag
tcgccccagcaagatcaaccaggcctcctacaggtccctcaggatcaagaggttctcagc
caaggcaacccgttcatgggcgtctcgtcggctgcgaccacctcaacggtcacgccctct
ttgtctgctggcgggcagcaaaccgccgtgcccccgccagcccccaagatcgtcatcctg
aaagccccggccggaagctccatgaccggtgctcatgtggcccagatccaagctcagcca
attggggcagccaacgggggcaaagtgacctttgccaaggtcctgacgggaacccctttg
cgtcccggggtctccatcgtctcaggcaatgcagtgctggccaccaaagtgtcccccgga
gccggggcacccgcgacactccaccggctggtgcaacccggccgtcctgtcaagcagcta
gtcctgcagcccgtgaagagccaagcgggagggaacacgggggttgctccactcaaacct
gccgtgaccctgacctcgactccagctcaggtgagcacacagttcttccagggagagtct
aaacgcatcaccttggttctccagcaacccccagcggctggaaatgctccgggacagcgg
caagttgttttgggcagtttgcctggcaagattgtccttcaagggaatcagctggctgcc
ctaagccaggccaaaggagtgccggggcaacctgccaaagtggtgaccatccagctacag
gttcaacagccaggacagcaacagcaatccagcggccagccggggacgcagaagatccag
ctcttgcagccgaccacggccggcgcctccggccagcagacccctttaggcgtacccgcg
gtccaacaagcccaagtggttgggggcacaggtcaaagggtgacggtccccgtcaaagtc
gtgctgcagccacaggccagttcgtcccaaggcagctcctcaggactctcagtagtgaag
gtgctgagcagcagtgaggtggcggccctcccgtcctccagcggtacacgcagcagctca
gacgaatcccgcaagctggagcatcagaagaagcaggagaaggccaaccggatcgtggca
gaggccatcgctcgggcccgagcccggggcgagcagaacatcccacgggtgctgaacgag
gacgagctgcctagcgttcggccagaagagacgggagaacgcaagcggcgccggaagggc
gggggtgaacgcatccccaaagaggaccgaccacgcaagggcaggggccaggcgggatcc
ggcaagagcaaaggccgagggaaacccagcacgatcacgccagttgttgggaagaaacgg
aaacggaatgcttcttcagacaattcagatgctgaggtgatgccagcccagtctccgcgt
gaggaggaagaggccagtatccagaaacggcgttcgaaccgtcaggtgaagcgaaagaaa
tatacagaagatctggacatcaagatcacggatgatgaagatgacgaagagctagatgtg
accgggcccattaagaccgaacagctcccagctccagaaccgcctgctccggaacctatc
cctgaaggagagacattgccatcaatgcagttctttgtggaaaacccgagtgaagaggat
gctgccatcgtagacaaggtcctgtccatgcgagtggtgaagaaggagctacccaacggg
cagtacacagaagcagaagaattctttgtgaaatacaaaaactactcttacttgcactgt
gaatgggccaccattgctcagctggagaaggacaagaggatccaccagaagctcaaacgc
tttaagaccaaaatggctcagatgaggcacttcttccatgaggatgaggagcctttcaat
ccagactacgtggaagttgaccggatcctggacgaatcgcacagcattgacaaggacaac
ggggagccggtgatctattacctggtaaaatggtgttcgctcccttacgaagacagcacg
tgggagctaaaagaagacgtggacgaagggaaggtccgggagtttaaacgcatccagtcc
aggcaccctgagctcaaacgggtggctcgaccccaggcaggttcctggaaaaagctggaa
ctttctcacgaatacaagaacggcaatcagttgcgcgaatatcagctggagggtgtcaac
tggttgcttttcaactggtacaataggcaaaactgcattctggccgacgaaatggggttg
ggcaaaaccatccaatccatcgccttcctggaggaagtttataacgtgggaatccgggga
cccttcctggtcatcgcccctctgtccaccatcaccaactgggagcgagagttcaacacc
tggactgagatgaacaccattgtgtaccacggcagcttggcatcccgccagatgattcaa
caatacgagatgtactgtaaggattcccggggtcgcctgatcccaggcgcctacaagttt
gacgccttgatcaccacctttgagatgatcctgtcggactgccccgagctgagggagatt
gagtggcgttgtgtgatcatcgatgaagctcaccgcctgaagaaccgcaactgcaaactg
ctggacagcctcaagcatatggacctggaacacaaagtgctattgacgggcacccctctc
cagaacacggtggaagaactcttcagcctcctgcacttccttgaaccctcccaattcccc
tctgaatcagagttcctcaaggacttcggggatctcaaaactgaggagcaggtacagaaa
ctgcaggccatcctaaagcccatgatgctccggcggctgaaggaggatgttgagaagaat
ttggcccccaagcaggaaacgatcattgaggtggagctgaccaacatccagaagaagtac
taccgggccatcctagagaagaacttcaacttcctctccaagggggcggggcacagcaac
atgcccaaccttctcaacaccatgatggagctacgcaagtgttgcaaccacccctacctc
atcaatggtgctgaggagaagatcttgaccgagtttcgggattcctgccaccaccacgtg
ccccacgattttccgctgcaggccatggtgcgttcctccgggaaattggtgctgatcgat
aaactgctccctaaactgaaagccggaggacacaaagtgctgattttttcccagatggtc
cgttgcctcgacatcctggaagactaccttatccaaaagaggtatctctacgagcgtatt
gatgggcgggtgcgcggcaatctgcggcaggcggccatcgaccgctttagcaagcctgat
tcggatcgctttgtgttccttctctgcacccgggcgggaggcctagggatcaacctcaca
gctgctgatacctgcatcatttttgactcggactggaatcctcaaaacgacttgcaggcc
caagctcgctgccaccgcatcggacagagcaaggccgtgaaagtttaccgcctcatcact
cggaattcctacgagcgggagatgtttgacaaagccagcctcaagctggggctggacaaa
gctgtcctgcagtccatgagcggacgagaagggagcatcactgggattcagcagttttcg
aagaaagagattgaggatttgctgcgcaaaggggcctatgccgccattatggaagaggat
gatgaaggctctaagttctgcgaggaagacatcgaccagatccttcttcggcgcaccacc
accattaccatcgagagtgaaggaaaaggatccacctttgctaaggcaagttttgtggcc
tctgaaaacaggacagacatcgccctggatgaccccaacttctggcagaaatgggccaag
aaagcggacttagacctggatctcctgaatagtaagaataacctggtgattgacacgccc
cggatccgcaagcagacccgccacttcagtaccctgaaggacgacgacctggttgagttc
tccgacttggaaagcgacgatgatgaccggccgcgctcccggcgccacgaccggcaccac
catcccctccaccattcgtacgggcgcaccgactgcttccaggtggagaaacaactgctg
gtctatggttggggccgctggagggagatcctgtcgcatggacgtttcaagcggcggatg
tccgagcgtgacgtggagaccatctgccgcgccatcctggtctattgcttgatgcattat
cggggcgacgagaacatcaaaggattcatctgggatctcatcagcccggttgagaacggc
aaagccaaagagcttcagaaccactcggcccctgctctgagctcccttcctgttcctcgg
gcaggcctgtccatcccggttccacggggccgcaaggggaagaaagtcaagtctcagacc
acgttcgatctccagaaagcagagtggatccacaagtacaacccggacacactcttccaa
gacgaaggctacaagaaacatctcaagcatcagtgcaacaaggtgctgctcagggtccga
atgctttattacctgcgtcaggaggtgatcggggaccaggctgagaaagtgttggcaggt
gctgtttccagcgaaactgacatctggtttccactcgtggatcaggccgaagtccccaca
gcctggtgggacaccgaagcagacaaatctttgcttcttggggtcttcaaacatggctac
gagaagtacaacaccatgcgagccgaccctgcgctctgttttctggagaaagccggccgc
ccagatgacaaggccatcgccgctgagcatcgaccggatgtgggcgagggggtggatttt
gacaaggactgcgaggatccggaatacaaacccgtcggagcccctgccaaggaacacgac
gaagagggtgaagcactaatgatgatggatgaagacatatcggtggtggacggggaggaa
ggtcagccagggaatcttttctggcctccagcctctgcgctcaccgcccgtttgcggcga
ctaatcacggccttccagcggagctacaagcgcgagcaactgaagatggaggccgcagag
cggggggatcggcgtcggcggcgttgcgaggctgccttcaagctgaaggaaatggtgcgg
cgagagaagcagcagaggtggacacgtcgtgagcaatcggacttctatcgtgtggtttcc
acgtttggagtggaatatgatccagacacgatgcggttccattggagtcggtttcggacc
ctcgcccgcttagacaagaagaccgatgaaagcctagccaaatattttcacggtttcgtg
gccatgtgtcgacaggtgtgccgccttcctcctgctgcaagtgatgagtctccagacccc
accctgttcatcgaacccatcacggaagagcgggcctcccgcaccctgtaccgcattgat
ctcctgcgccgtctgcgggagcaagtgctgtgccatcccctcttggaggagcgccttgcc
ctgtgccagcctcctgggctcgagatgccaccgtggtggcaatgcgggcgccatgacgga
gaactgctgcggggagtggcccgccacggtctgagccaaaccgacaccaccatcatgcag
gacccagacttttctttcctggcggctcggctcagccacatgcacagtcgggcagggggc
acagggacaccccctcttccgcccccggggccagcccagcctacagggctaccccttccg
ggggtcagcacggcggctactccgtcccccctgctcctcgctccacctttgaatgagcca
cctgctccaccgcagccgctcgccttgccccccaaacccgaatcggccgaggactccgac
tccgaacttgacctcagcaagatttctgcttcatcgtcgtgttcgtcctcctcaggctgc
tccgacgacagtgagggtgaagaggcttcttgtggtgggaagctgtttgaggaggaggaa
tcctcgctgctctccctgcccacttcccacgagggaaactccccgcagcctagtgcctcg
gatctgctgctccaggagcgccaaagggcccacgagtggccaaaggaccgtgtcctcatc
acccgtatcgacttggtgtgccaggctgtgctgtccggaaagtggccctctccacaacag
ggccaggtagtgtcctgcgttggccagggagaaggcctgccccacttgcacggagagtac
accacctcccccatccctcacatctgccctctggcatcccaagaggaaggcacagtttcc
ttcacccgcctccgacacggtggccaagagaaggagtttaccgtgcagatcaaagatgaa
gaaggaatcaaactgactttccaaaagcacaagctgatccctaatggcaccgttcgggat
cggcctgctctcacccagaagaaaagtagcaagaaaatggtggagctggaactgcagtgt
ctggaagctctgagaggcccagatatcgacctggaggctcatatcccagtggtgaacaag
acagacgggacgctgctggtgggcgatgcggctccccgccgggctgatctcgaggtgtgg
ctgcaagcccaccccgagtatgcggtagatcctcgcttcttggcttacatggaagaacgc
cggaagcacagatggccccggtttccaaaacctgttccgatagagccaagctgtctggta
gggctggagaggatgcaggtagctggcatttctgccaacggtaaaaagggttttcttccg
gatccgacgatgaatcgcctccttccaggagccgtgggctctgacaacacacagaaacgt
ggtcgccagaccccgatggagttttccaacatgatggctctgatgggagccggccgggtc
caactaggagccacgggacccctctctctgcaccaccatgcccacttccaaaccacccca
gcccatggctccaccttgcaatacatgccgttccccgccgctgccgctgctgccgctgcg
gccactgccgccaccacctctggtacccttctccatccgggactgggccatgccggctac
gccgccgcccccttgcacctgggccaccctcagcgcgtggacgaagacgaggaggaagac
gaaatggacgacttgtctcagggctacgccagttcggaacgggacttttccttgctggac
gacgaccccatgatgccggccaactccgactccagcgacgaaggggaggaagaaggagaa
gactga
DBGET
integrated database retrieval system
