Ahaetulla prasina (Asian vine snake): 131196935
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Entry
131196935 CDS
T09329
Symbol
THOC6
Name
(RefSeq) THO complex subunit 6 homolog isoform X1
KO
K13175
THO complex subunit 6
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131196935 (THOC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apri03019
]
131196935 (THOC6)
03041 Spliceosome [BR:
apri03041
]
131196935 (THOC6)
Messenger RNA biogenesis [BR:
apri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
131196935 (THOC6)
Spliceosome [BR:
apri03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
131196935 (THOC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40
WD40_Prp19
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_Vps41
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_IP5PC_F
Beta-prop_SPT8
WDR54
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_DCAF12
WD40_like
Motif
Other DBs
NCBI-GeneID:
131196935
NCBI-ProteinID:
XP_058036417
LinkDB
All DBs
Position
4:20735723..20749058
Genome browser
AA seq
383 aa
AA seq
DB search
MPGRSLARARRRGEIEQPATMNIQRSLEMLHMTIYTQSFSPCGRYLAAGNNYGEIAIFSL
SAALSSEAKEENKKPVMTFAAHSGAIYAMVSTDRQLLSAGNGEVKAWNWSEIVKKNCKEA
WSRRPPYGSRLEVPEINSLQLNLKDNTLLMAGGDCVIHMMDLETGAFTREFQGHTDYIHC
LALREQLRECLSGSEDGTVRLWDLRTGGQVQSIEVHKYEECNRPQNGKWISCLATDSDWM
VCGGGPALTLWHLRSVTPTTVFPLPSCQQQVMFYQDLILSAGHSPTINHLQISGEVKAQI
PCLPRCVHSISINERSVEHKLASRTSRERWEQTCQAIKKCSGYNLSGLQPLNLLQKFAVT
VSAYFFCDHEGWNYFIIGNNFLR
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgcccggtcggtccttagcacgtgcgcgccgtagaggagaaattgagcaaccagcaacg
atgaatattcaacgatctcttgagatgttgcacatgaccatatacactcaaagcttctca
ccttgtggcagatatttagcagccggaaacaactatggagaaattgccatattcagcctg
tcggcagcattaagttcagaagccaaggaggagaacaagaagccggtgatgacctttgca
gcccacagtggagctatctatgccatggtgtccactgatcggcagctgttaagtgctggc
aatggagaggtcaaggcctggaactggagcgagattgtgaaaaaaaattgcaaagaagct
tggagtaggaggccaccttatggaagtaggcttgaagtgccagaaatcaacagcctgcag
ctgaatctgaaggataatactctactgatggccggaggtgactgtgtcattcacatgatg
gacctggagactggagcctttactcgtgaatttcagggtcacactgattatatccactgt
ttggcccttcgggagcagctccgagaatgcctgtcaggaagtgaagatgggaccgtacgt
ctttgggatttacgtacaggaggtcaagtccaatcaattgaagtccacaaatatgaggaa
tgcaaccgtcctcagaatgggaagtggatcagttgtttggcgacagactctgattggatg
gtatgtggtgggggcccagcgctcactctttggcacctacgttcagtgacacccaccact
gtatttcctttgccttcgtgccagcagcaagtcatgttctaccaagatctgattctctct
gctggccacagtccaaccattaatcatttacagatcagtggggaagtgaaggcccaaatc
ccttgccttcctcgttgcgttcactccatttccatcaatgaacgctctgtagagcataag
ctagcatccagaaccagcagggaacgatgggaacagacttgccaagctataaagaaatgt
tcaggatataacctctcaggtttgcagcctttgaacctcctgcaaaaatttgctgtgaca
gtttcagcctatttcttctgtgatcatgaaggttggaattactttataataggaaacaat
ttcttaagatga
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integrated database retrieval system
