Ahaetulla prasina (Asian vine snake): 131198280
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Entry
131198280 CDS
T09329
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein type 5 subunit alpha-like
KO
K04838
voltage-gated sodium channel type V alpha
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
131198280
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
apri04040
]
131198280
Ion channels [BR:
apri04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
131198280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
GPHH
PKD_channel
IQ
Motif
Other DBs
NCBI-GeneID:
131198280
NCBI-ProteinID:
XP_058038750
LinkDB
All DBs
Position
4:complement(142988166..143074591)
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AA seq
1570 aa
AA seq
DB search
MPNFSFSTAHNFLRFTPESLDSVRKRIAEKEASRSKASEKDNNETQEENIRPQLDLKVLK
KLPILYGKPPPWLIGEPLEDVDPYYRDHETFMVLSSRSRIFRFTASKSLFLFSPFHPLRR
LAIKILIHVMFIAFITCVVLVNCVFMALNTPPTDGNTTEIIFTSIYTAEFVIKVVARGFV
FNEFTYLRDPWNVLDFFVLIMTYVAFSQNFGSISALRIFRILRTLKAVSVIPGLKVIISS
LLQSVKKLANVMLLTVFFLAVFALVGLQLFMGNLRYICVPCSLLTENVNKSDCLLKATEW
EESKFEFPPSLKEAIKKHLTWQCCSLWLQIKNILKKIMMNPLMELFITLCIITNTMLMAL
EKLSLSSEQFXCIFLQVFTAIFTAEMVLKMVALDPYYYFQCSWNVFDFTVVIIGIINLLL
SKRAPIFRTLRIFKLSKFWPALNKLMKIMLKSVGPLGNLTLVLIFTVFIFAVVGKQAFGN
YYSTVAANASICNNDGVPNCASSNSSETCQLRWHMKDFLHSFLIIFRILCGEWISTMWEC
MQVAGEGRCIILFMLVLVIGNLVVLNLFIALLLSSFSSSDSETEADNHKPEPGKALALIQ
SGLRFVRLFLRDWCCHVFLKKLRVTGTKKKNETTIIERSCDAEPTKEISVNFASKESFGN
WDKLPWDRKQEDLVTDYREIPTIPLAELETLSVEEIDLSTLENNLRKRKEIPVYQGQNRR
LSSQVSETTSIWSLDVPKRSDCDSSCSDTSTVDQRSPIHHVPEVKKEPQDCFPQVFMKLF
PCCRVNTDTFPGNTWWRVRKTCYKIIKHNWFESFIIFMILLSSGALIFEDIYLDRRKIIK
NILDYADVFFFCIFFLEMLLKWVAYGFRKYFTDGWCILDFFIVSFPMARGVSKTRQCDSN
ISTKSLRTLRALRPLRALSRFKGIKVVVNALAGAIPSIGNVLLVCIVLWLPFNILGVQLF
GGKFSCWNVENKNSCINKTINFDHVGNGYLALLQVATFKGWMDIMYAAVDSANDNSTQPC
FENNIYAYIYFVVFIIFGSFFMLNLFIGVVIDNFNQQRKKISGELIFLSEDQKKYYNALK
KLGSKKPHKTIPRPLNQFQGFLFDIVNKQAFELFIISLIFLNVVVMAVEYEGQDVAADQL
LEKINCVFVALFTGECVMKLLALRLYFFKDSWNIFDLVVVILSIISLAATQLWRHLNFPP
TILRVIRVIRISRLLRLIRGARGLRTLLFALLMSLPALTNIGLLLFLIMFIYAIFGMANF
SCASWRQGIDDIFNFQTFGNSMLCLFQITTSAGWDELLGPMLLHQDNYMCAPNINSNPQK
SPCVNSKVAIAYFVSYIIISFLIVVNMYIAVIIENLNIATEESTEPLGDDDFEIFYEIWA
KFDPTATQFISYSALSKFADALAEPLRIPKPNSQQLLSMDLPIVNGNKIHCLDILFAFTK
RVLGESGEMDSFESQIEEKYPEKIAYEPIVTTPKRKQDESAIIIQRAFRMHLLQSAGKEA
PQEPFVTISLENIPEEENLSVFGLSENEGSQSSNSQSLSSVVIPPSYSNVTSIVPDIQQE
ESSGHQDDTE
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atgccaaatttttctttttcaacggcacataatttcctccgtttcacccctgaatctttg
gattcagttagaaagagaattgctgagaaggaagccagtcgctccaaagcctcggaaaag
gacaacaatgaaacacaagaagaaaatattcgaccgcagctcgatctgaaagttttaaaa
aaactgcctattctttatgggaagccccctccttggctcatcggagaaccgttggaagat
gttgacccctattatagggatcacgagacgtttatggtgctatcatcccgaagcagaatc
tttcgatttacagcctctaaatctttattcttatttagtcctttccacccactaagaaga
ctagccataaaaattttaatacatgttatgtttattgcatttataacatgtgttgttctc
gtcaactgtgtttttatggctttaaacactcctccaactgatggcaacactactgaaatt
attttcaccagcatttatacggcagaatttgtaatcaaagtggtagcaagaggatttgtt
tttaatgaattcacttacctgcgagatccttggaatgtcttggatttctttgttttaatt
atgacatatgtagctttcagtcaaaactttggcagcatttcagctctccgaattttcagg
attctgagaactttaaaggcagtttctgtaattccaggcttgaaagtcattatatcttcc
cttcttcagtcggtgaaaaaacttgcaaatgtgatgttgctgacggttttcttcttggcc
gtgtttgcattggttggtcttcagctcttcatgggtaacttaagatatatttgtgttccc
tgttcgcttcttactgaaaacgtcaacaaatctgattgtttattaaaggctacagaatgg
gaagaatccaaatttgaatttcctcccagcctgaaagaagctatcaaaaagcacctgact
tggcagtgctgttcgctgtggttgcaaataaagaatatattgaagaaaataatgatgaat
cctttaatggaactatttattacactgtgcattataacaaataccatgctgatggcattg
gaaaaactttcattatcatcagaacagttctgatgtattttcttgcaggtgttcactgcc
attttcacggctgaaatggtcctcaagatggttgccctggatccgtattactactttcag
tgctcctggaatgtgtttgacttcactgtggttattataggcataataaacctgttgctg
agcaagcgggcgccaattttcagaacgctgagaatcttcaaactttcaaaattttggccg
gctttaaataagctgatgaaaataatgttgaaatcagtaggccctctgggtaacctcacc
cttgttctgatattcactgtattcatttttgctgtggttgggaagcaagcctttgggaat
tattacagcacggtcgctgctaacgctagcatctgcaacaacgacggtgtgccgaattgt
gcttccagtaatagttctgagacatgccagttgcgttggcatatgaaggattttttgcat
tcatttcttattatattccgaattctgtgcggagaatggatttccaccatgtgggaatgc
atgcaggttgccggagaaggacgatgcataattctgttcatgctggtcctggttatagga
aacctggtggtcctcaacctctttatcgctctgctgctgagttccttcagtagcagtgat
tccgaaacagaggcagataaccacaaacctgagcctggaaaggctttagcacttattcag
agcgggctgcgatttgtcagacttttcctgagggactggtgttgccatgtcttcctgaag
aagctgagggtgacaggcacaaagaaaaagaatgagaccaccatcattgaaaggtcctgt
gatgctgaacccacgaaagagatctcagtgaacttcgccagcaaggaatccttcgggaat
tgggataaacttccgtgggatagaaagcaagaagacttggtgacagattacagggagatt
cccactattcccctcgctgaactggagacattaagcgttgaggaaattgacctcagtacc
ctggagaacaatctgcgaaagaggaaagaaataccggtataccaaggccaaaatcgaaga
ctctcttctcaagtttctgaaactacaagtatttggtctttggatgttcccaagagatca
gattgtgattcgagctgttcagataccagcacggtggatcagagatctcctatccatcat
gtgcctgaagtcaagaaggaacctcaggactgtttcccacaagtcttcatgaaattgttt
ccatgctgcagagtgaatacagatacatttccaggcaacacttggtggagagttagaaaa
acctgctacaaaatcataaaacataattggtttgaatcctttattatattcatgatatta
ctgagtagtggtgctctgatctttgaagatatttacctcgatagaagaaagatcataaaa
aacattcttgactatgccgatgtattctttttctgtatctttttcttggagatgcttctc
aaatgggtggcctatggctttagaaaatattttactgacggctggtgtattcttgatttc
tttattgtttcttttcctatggcaagaggtgtatcaaagacaagacagtgtgacagcaat
atctccacaaaatctctaagaacattgagggcccttagacctctccgagcactgtctaga
tttaaaggaataaaggttgttgtgaatgccctggccggagctatcccttccattggaaat
gtgcttcttgtctgcattgtactatggctcccatttaacatcttaggagtgcaactgttt
ggagggaaattttcatgttggaacgttgaaaacaagaatagttgtattaataagacaatc
aactttgatcatgttgggaatggctatctggctctccttcaagtggcaacatttaaaggc
tggatggatattatgtatgctgcagtagattcagctaatgataattccacccagccatgt
tttgaaaacaacatatatgcatacatttactttgtggtttttattatatttggatccttc
ttcatgctgaacctcttcattggtgtagttatcgacaatttcaaccagcaaagaaaaaag
ataagtggagaactcatctttttgtcagaggatcaaaagaaatattataatgcactaaaa
aagcttggtagcaagaaaccacataaaactattccacgacctctgaaccagttccaagga
tttctttttgatatcgtaaacaagcaagcattcgaactgttcattatcagtcttatcttc
ttaaatgtggtggtcatggcagtggaatatgaaggtcaagatgtggctgctgaccaactt
cttgaaaagatcaactgtgtctttgttgccctcttcactggcgagtgtgtaatgaaactg
ttggctctgaggctttatttcttcaaagactcctggaacatatttgatttggtggttgtc
attctttcaatcattagccttgcagcaacccagctttggcgacatctcaatttcccgccg
accatcttgcgtgtcattcgtgtgatccgtatcagtcgcctcctgaggctgatccgaggc
gcgagaggactgcgcaccctgcttttcgccctgctgatgtcccttcccgctctcaccaac
attgggctcctcctcttcctgatcatgttcatttacgctatatttggcatggctaatttc
tcctgcgcaagttggcgccaggggatcgacgacattttcaacttccagacgttcggcaac
agcatgctttgcctcttccagataacaacgtctgccggctgggatgagcttctggggccg
atgctcctccatcaggacaactatatgtgtgctccgaacatcaactccaacccacagaag
agcccctgcgtcaacagcaaggtggccattgcctattttgtcagctacatcattatttca
tttctgattgtagtcaacatgtacattgctgtcatcattgagaatttgaacattgccacc
gaagagagcacagaaccactaggcgatgatgactttgaaatcttttatgagatctgggca
aaatttgaccccacagccacccaatttatctcttactcagcactgtccaagtttgcagat
gccctggcagaacctttacgaataccaaaaccaaatagccagcagttgttgtccatggac
cttccgatagtcaatgggaataaaatccactgtttggatattttgtttgcttttaccaaa
agggtgctgggagaatctggagaaatggactcgtttgagtcccaaatagaagaaaaatat
ccggagaagattgcttatgagccgatcgtgacaactcccaagagaaagcaggatgagtct
gccatcataattcaaagagcttttcggatgcatctccttcagagtgcaggaaaggaggcg
cctcaggaaccctttgtgactatctccttggagaatattccagaagaggaaaacttatct
gtgttcggcctgagtgaaaatgaaggcagccagtccagtaattctcagagcttgtcttcg
gtggtcattcctccatcctatagtaatgtgactagcatcgttcctgacattcaacaggag
gagtcttctggccatcaggatgatacagagtga
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integrated database retrieval system
