Ahaetulla prasina (Asian vine snake): 131199308
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Entry
131199308 CDS
T09329
Symbol
DDX3X
Name
(RefSeq) ATP-dependent RNA helicase DDX3X isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apri03019
]
131199308 (DDX3X)
03041 Spliceosome [BR:
apri03041
]
131199308 (DDX3X)
03036 Chromosome and associated proteins [BR:
apri03036
]
131199308 (DDX3X)
Enzymes [BR:
apri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131199308 (DDX3X)
Messenger RNA biogenesis [BR:
apri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
131199308 (DDX3X)
mRNA cycle factors
Common to processing body (P body) and stress granule
131199308 (DDX3X)
Spliceosome [BR:
apri03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
131199308 (DDX3X)
Chromosome and associated proteins [BR:
apri03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
131199308 (DDX3X)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
131199308
NCBI-ProteinID:
XP_058040938
LinkDB
All DBs
Position
5:complement(64101662..64121287)
Genome browser
AA seq
731 aa
AA seq
DB search
MSHVAVENALGLDQQFAGLDLNSSDSQSGGGTASKGRYIPPHLRNREASKQAYNIHNYTA
NYYSNSMPPPRSYSPSWDSRGGNGYMNGYDRDSRMNGYDRDRGVFGSRGGSGRDDRGFDG
GWNAARDRDAYSSFGARSERGSGKSSFFTDRGNGSRGRFDDRGGRCSSDFDGIGSRGDRS
CFGRFDRGGNSRWCDKNDEDDWSKPLAPSERVEQELFSGGNTGINFEKYDDIPVEATGNN
CPPHIESFSDVDMGEIIMGNIELTRYTRPTPVQKYAIPIIKDKRDLMACAQTGSGKTAAF
LLPILSQIYTDGPGDALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFAYRSK
VRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLD
MGFEPQIRRIVEQDTMPPKGVRQTMMFSATFPKEIQMLARDFLEEYIFLAVGRVGSTSEN
ITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGD
RSQRDREEALHQFRSGRSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGR
VGNLGLATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAYEQHHKGGSSRGRSKGRFS
GGFGARDYRTSSSSSGGSSSFGSSRASSGRSGGGGGGHGGSRGFGGGYGGIYNSDGYGGN
YNSQGVDWWGN
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggcagtggaaaatgccctcggtctagatcagcagtttgctggtctagac
ttgaattcctcagactctcagagtggaggaggaacagcaagtaaaggccggtacattcct
cctcatttgcgaaatagagaagcttcaaagcaggcatacaatatccataactatacagca
aactactattccaattcgatgccaccaccaagaagctattcccccagctgggactctcgt
ggaggtaatggctatatgaatggatatgatcgtgacagccggatgaatggctacgatcgt
gatcgcggtgtgtttggatccagaggaggatctggacgtgatgacagaggatttgatggt
ggatggaatgctgccagagacagggatgcatatagtagctttggtgcaagaagtgaacgt
ggatcaggaaaatcaagtttctttactgaccgtggcaatggctcaagaggaagatttgat
gatcgtggtggaagatgcagtagtgattttgatggtattgggagtcgtggtgataggagt
tgctttggtcgatttgatcgtggtggaaacagtcgttggtgtgataaaaatgatgaagat
gattggtcaaaaccacttgccccaagtgaacgtgtggaacaggagctgttctctgggggg
aatacaggcattaactttgaaaaatatgatgacattccagttgaggcaacaggcaacaac
tgtcctccacacattgaaagttttagcgatgttgacatgggggaaattatcatggggaac
atcgaactcacccgctacactcgacctactcctgttcagaaatatgctattcctatcatc
aaagacaaaagagatctgatggcttgtgcccagacaggttctgggaaaactgctgcattt
cttttgcccatattgagccagatatatacagatggtccaggtgatgctttgagagccatg
aaggaaaatggaagatatgggcgtcgtaaacaatacccaatttcattagttttggctcca
acaagagaattggcagtgcagatatatgaagaagctagaaagtttgcctatcgttccaaa
gtccgtccttgtgttgtatatggtggtgctgacattggccaacagatacgtgacttagaa
cgtggttgccatttgcttgtggcaactccaggccgccttgtagacatgatggagagggga
aagataggcctagacttctgcaaatacttggttttggatgaagctgatcgtatgcttgac
atgggttttgagcctcagattcgtcgtattgttgaacaagatactatgccaccaaagggt
gtccgtcagacaatgatgtttagtgctacttttccaaaggaaattcagatgcttgctcgt
gatttcttggaggaatatatttttctggctgttggccgagttggctctacatctgagaac
atcacacagaaagtagtctgggtggaagagtcagacaaaaggtcatttctgcttgatctc
ttgaatgccacaggcaaggattctttgactctggtgtttgtagagactaaaaaaggagct
gattctctggaggatttcctgtaccatgaaggatatgcttgcaccagtatccatggtgat
cgttctcagcgagatagagaagaggcgttacatcagttccgctctggcagaagtcccatc
ttagttgccactgcagtagcagcacgaggactggatatttccaatgttaaacatgtcata
aattttgatttgccaagtgacatagaagaatacgtgcatcgcattggccgtacgggccgt
gtaggaaaccttggtcttgccacatcattttttaatgagaggaacataaatatcacaaaa
gacttgttagatctacttgttgaagctaaacaggaagtaccatcttggctagaaaacatg
gcatatgagcaacatcataagggcggaagcagtcgtggacgttccaaaggtcgcttcagt
ggaggctttggtgccagagattatcgaacaagcagcagcagcagcggtgggagcagtagt
tttggcagcagtcgtgcaagtagtggtcgcagtggtggtggtggtggtggtcacggaggt
agcagaggatttggaggtggctatggcggcatctataacagtgatggatatggaggaaac
tataactctcagggggtagattggtggggcaactga
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