Ahaetulla prasina (Asian vine snake): 131199460
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Entry
131199460 CDS
T09329
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131199460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apri03019
]
131199460
03036 Chromosome and associated proteins [BR:
apri03036
]
131199460
Messenger RNA biogenesis [BR:
apri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
131199460
Chromosome and associated proteins [BR:
apri03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
131199460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup96
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
131199460
NCBI-ProteinID:
XP_058041232
LinkDB
All DBs
Position
5:complement(995492..1029369)
Genome browser
AA seq
1481 aa
AA seq
DB search
MFNKSFGTPFGGNTGGFGTTSTFGQNTGFGATSGGAFGTSAFGSNNNAGGLFGSTQTKPG
GLFGASTFSQPATSSTSTGFGFGTSTGTSSGLFGTASTGGGLFSTQSNAFAQNKPVGFGN
FGTSTSSGGLFGTTNTASNPFGGTSGSLFGATSFSTVPTGTTIKFNAPTGTDTMVKSGVS
TNISTKHQCITAMKEYESKSLEELRLEDYQANRKGPTNPVGAGATPGLFGSSTATSSTAT
GLFGSSTTNTGFSYGANKTAFGTSTTGFGTGTGSLFGSTQPTPSLFNKPFGQPTTAPNTG
FSFTNTSTLGQPNTNTMGLFGAAQPTQTGSLFGTAANTNTAAAFGTGTGLFGQPNTGFGV
GGSSLFSNKPAGFGTTTTSAPSFGTTTTGLFGFNANTTGNSLFGNKPATGALGPGLGAGF
GTALNPGQNSLFGSTQPKLGGTLGTGAFGAPGFNTSTATLGFGAPQPAVALTDPNVSAAQ
QAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRPA
TRVRPKALQTSGSSKSHLFDGLDDDEPSLTNGAFMPKKSIKKLVLKNLNSGSLFSPGGAE
VDDIASPSIYPENGDRLGSENHRQDEEQEDDSYSREMSRFLANAITKPLPQTPENASHKH
HNNSVDDTLMALNVRPALRNGLENSLEEASYHEESLQEDLDKESEEQLHPTHPAGIVLTR
VGYYTIPSLEELARMTSDTGECIVTDFTVGRKGYGSIYFEGEVNLTNVNLDEIVHIRRKE
VIVYPDDELKPPIGEGLNRRAEVTLDGVWPTDKTSRSLIKSPERLTDMNYEGRLEAVSRK
QGAQFKEYRPETGSWVFKVAHFSKYGLQDSDEEDEDNVAKVEAKKLKTAQVPLPGQPMSQ
QMAAPPSKSPEADRLGKGVEFDSDMADITQDLLPESMAEENLVEEQEPVPASTHIASSLD
INPHTLQIMKASLLADEEEPDWMTDPQFGKAAAEMDPSQETCSPRIPISSSSLRGWKSRP
PGSRLLQSRLSTGSFLLPNASLQDRCSPRTSSLGGVLPAPPWAALSPLASAFVMPHSAPE
MPLKTVGVRRQPGLVPLKKSIAYGKGRLLKDMALFVGRSFRVGWGPNWVLAHGGDRLSPL
SEPEDHGEVTEYGFLPAPVAPKQVSESPFKVHLEKLTLDGKQTDRVYLLPLEIKLKHSTV
HLDDPCPFLAPNPGVATIHEYAAWASEVSEDAEEEEEAVVRVWGLVWRLCEALWGRLKEL
EGRLEEPDEYGLLLERRRAFSHWLSRTAAERIQEEVSLRQNDSPAEAVFSYLTGKQIGNA
CRLAQQSGDLRLSLLLSQLVGSQEVRELLALQLADWHQLQADSFIQDERLRIFCLLAGKP
VWQLSEKRTINVCSQLDWKRSLGVHLWYLLPSTAPLSKALSMYEAAFQVGSRWGRPGQQG
SLEWKPPPELGRERSRQGNNGLGLSLAQEGPLGELWPLFFT
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataaatcttttggaacgccttttggcggcaacacagggggatttgggacaact
tcaacttttggacagaatactggctttggggcgaccagcggaggagcctttgggacgtca
gccttcggatccaataacaatgccggaggactcttcggtagcactcagaccaagccagga
gggctgtttggggcaagtactttcagccagccagccacgtcgtccactagtaccggtttt
ggtttcggcacgtcaactggaacttccagcggcctattcgggaccgcaagcacaggggga
ggcctcttctccacccaaagcaatgccttcgcccagaacaagccggtggggttcggcaat
tttgggacaagcaccagcagtggagggttgtttggcaccactaacacagcctccaaccca
tttgggggcacatcgggctctctttttggggctacaagcttttccaccgtccctactggc
accacgattaagttcaatgcaccaactggtacggacaccatggtcaaatctggcgtcagc
accaacatcagcaccaagcatcagtgcatcactgctatgaaggagtatgaaagcaaatca
ctcgaggagctccgtttggaagactaccaggccaacaggaaaggccccaccaacccagtg
ggagctggagccacaccaggcttgtttggatcgtcaaccgctacatccagcacggccaca
ggactcttcggctcctccaccaccaacacaggattttcgtatggggcaaataaaacagcg
tttggaaccagtaccaccggttttgggacaggaaccggaagtctctttggttcgactcag
ccgacgcccagcctcttcaataaaccttttggtcagcccaccaccgccccaaacacaggt
ttctcattcaccaacaccagcacccttggacagcccaacacaaacacgatgggcttgttt
ggagctgcccagcccacgcagaccggaagcctttttggcacagcagccaataccaacaca
gcagctgcctttggaacaggaaccggactctttgggcagcccaacaccggctttggtgtt
ggtggctcgtctctctttagtaacaagcctgctggcttcggcaccacgaccaccagcgca
ccctcattcgggacgacaacaactggacttttcgggttcaatgcaaacaccacaggaaac
agcctctttggaaacaagcctgcaaccggggctctgggtccaggcctcggggcgggattt
gggacagcccttaatccagggcagaattcactctttggcagcacccagcccaagcttggg
ggcacgctcgggacgggagcctttggtgcccctggatttaacacatcaaccgccacgttg
ggtttcggagctccacagcctgctgtggccctgacggatcccaacgtctctgcggcccag
caggccgttctgcagcagcacctcaacagcttgacctactcgcccttcggggactcgcct
ctcttccgaaaccccatgtctgacccaaagaagaaggaggagaggctgaaaccaaccaac
ccggcagcccagaaggcactgaccaccccgacacattacaaactgactccccgcccggca
actcgtgtgcgccccaaagctttgcagacaagcggctcctccaaatcccacctttttgat
ggtttggatgacgatgagccttctctgaccaatggggccttcatgcccaagaagagcatt
aagaagctggttttgaagaacctcaacagcggcagcctcttctctcccggcggtgctgaa
gtggatgacattgcctcgccttccatctatcctgagaatggggatcggttgggtagtgag
aaccatagacaggacgaggagcaggaagacgacagctactcccgggaaatgtccaggttc
ttagccaacgccattaccaagcccctcccccagactccagagaacgcctcacacaagcat
cacaacaacagtgtggacgacaccctcatggccctgaatgtgcggccagccctgcggaac
gggctggaaaacagcctggaggaagcttcctaccacgaggagtccctgcaggaggacctg
gacaaggagagcgaagagcagctccatcccacccatccggcaggaattgtcttgacgcga
gtgggctactacaccattccctccctggaggagctagccagaatgaccagtgacacggga
gagtgcatcgtgaccgacttcactgtcggccgtaaaggctacggctccatctactttgag
ggcgaggtcaatctgaccaacgtgaacctggatgagatcgtgcacatccgcaggaaagag
gtcatagtctacccagatgatgaattgaagccccccatcggggagggcttgaacaggcga
gccgaagtcaccttggatggagtttggcccacggacaaaacctcgcgctccttgatcaag
agcccagaacggctgacagacatgaactacgaaggccgactggaagccgtctctcggaaa
cagggagcccagtttaaggagtaccgccccgaaactggttcatgggtattcaaggtggcc
cacttctcaaagtacggcctgcaagactccgatgaggaagatgaggacaacgtagccaaa
gtggaggctaagaagctaaaaaccgctcaggtgcccctgccaggccagccgatgtctcag
caaatggctgcacctccttccaagagccctgaggctgaccgtctggggaagggggtcgaa
tttgacagtgacatggcagacatcacccaagacctgcttcctgagtccatggcggaagag
aatctggtggaagaacaggagccggtgccggcctcgacccatattgcgtcctccctggac
atcaaccctcacacgctgcagatcatgaaggcttctttgctggcagacgaggaagaaccg
gactggatgacggatccccagtttggcaaggcagctgcagagatggacccttcgcaagag
acctgctctccgaggattcccatctcctcctcctccttacgaggatggaaaagccgcccc
ccaggtagcaggctgctgcagtcaagactgtccaccggttctttcctgctcccaaacgcc
tccctccaggaccgctgcagtccgaggacttcctcactgggcggggttttgcctgccccg
ccttgggctgctctttctcccctggcctctgccttcgtcatgccacactcggctcctgaa
atgcccctgaaaaccgtgggcgtccgcaggcagccaggcctggttcccctgaagaaatcg
attgcctatgggaaaggacggctgctgaaggacatggccctcttcgtgggacgctccttc
cgggtgggctgggggcccaactgggttttggcccacggcggagaccgcttgagccccctg
agtgagccggaagatcacggggaggtcacggaatacggattcttgccagctcccgtggca
ccaaagcaggtctccgagtcccccttcaaggtccacctggagaagctgaccttggacggc
aagcagaccgaccgcgtctacctcctcccgttggagatcaagctgaagcacagcaccgtc
cacctggatgacccctgccccttcctggcccccaaccccggcgtggcaaccatccatgaa
tatgccgcctgggcctcggaggtgtcggaagacgcagaagaagaagaagaagcggtggtg
agggtctggggcctggtctggcgcttgtgcgaggcactgtggggccgcctgaaagagctg
gaggggcgcctggaggagcccgacgagtatgggctgctgctggagcgccggagggccttc
tcccactggctctcccggacggcggccgagcggatccaagaggaggtctcgctccggcag
aacgacagccccgccgaggccgtcttcagctacctcaccgggaagcagatcggcaacgcc
tgccgcctggctcagcagtctggggatctccgcctgtctctgctcctctcccagctggtg
gggagccaggaggtccgggagctgctggccctgcagttggccgactggcatcagctccaa
gcagacagcttcatccaggacgagcggctgcgcattttctgcctcctggctggcaaaccg
gtgtggcagttatccgagaagagaaccatcaacgtttgttcccaactggactggaagcgc
tctctcggggtccacctgtggtacctgctgccttcgacggcccccctttcgaaggccctc
agcatgtacgaagctgcattccaggtaggtagccgttggggacgcccagggcagcagggc
agcctggagtggaaacctccacctgaattgggaagagagcgctcccggcaagggaataat
gggctcggcctttctctggcccaggagggtcctttgggagagctttggccgctcttcttc
acttga
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integrated database retrieval system
