KEGG   Ahaetulla prasina (Asian vine snake): 131199734
Entry
131199734         CDS       T09329                                 
Symbol
HMGB1
Name
(RefSeq) high mobility group protein B1
  KO
K10802  high mobility group protein B1
Organism
apri  Ahaetulla prasina (Asian vine snake)
Pathway
apri03410  Base excision repair
apri04140  Autophagy - animal
apri04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:apri00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    131199734 (HMGB1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    131199734 (HMGB1)
  09143 Cell growth and death
   04217 Necroptosis
    131199734 (HMGB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:apri03036]
    131199734 (HMGB1)
   03400 DNA repair and recombination proteins [BR:apri03400]
    131199734 (HMGB1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:apri04147]
    131199734 (HMGB1)
Chromosome and associated proteins [BR:apri03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    131199734 (HMGB1)
DNA repair and recombination proteins [BR:apri03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     131199734 (HMGB1)
   MMR (mismatch excision repair)
    Other MMR factors
     131199734 (HMGB1)
Exosome [BR:apri04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   131199734 (HMGB1)
SSDB
Motif
Pfam: HMG_box_2 HMG_box HMG_WDHD1 HMG_box_5 NOA36
Other DBs
NCBI-GeneID: 131199734
NCBI-ProteinID: XP_058041795
LinkDB
Position
5:complement(29235213..29243871)
AA seq 215 aa
MGKGDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMARADKVRYEREMKTYVPPKGESKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTSAEDKQPFEKKAAKLKEKYEKDIAAYRAKGKPDAPKKVAPKPEK
SKKKKEEEDDDDDDEEDDEEDEEEEEEDEEEEDDE
NT seq 648 nt   +upstreamnt  +downstreamnt
atgggcaaaggtgatcctaaaaagccaagaggtaaaatgtcctcgtatgcctattttgtg
caaacctgccgggaagagcacaagaagaaacacccagatgcttcagtgaatttctcagag
ttctcaaagaaatgttcagaaaggtggaagactatgtccgctaaggaaaaggggaaattt
gaagatatggcacgagctgacaaagttcgttatgaaagagaaatgaaaacctatgtaccc
ccaaaaggagagtcaaaaaagaaattcaaggatccaaatgcaccaaagaggcctccttca
gcatttttcttattttgttctgagtatcgtccaaaaatcaaaggagaacatcctggtctt
tccattggtgatgttgcaaagaaacttggagagatgtggaataatacatctgcagaggat
aaacagccctttgaaaagaaggctgctaaactgaaggagaaatatgaaaaggatattgct
gcataccgagctaagggaaagcctgatgcacccaaaaaggtagctcctaagcctgagaaa
agcaagaaaaagaaagaagaggaagatgatgatgatgatgatgaagaggacgacgaggaa
gacgaggaagaagaagaggaggatgaggaggaagaagatgatgaataa

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