Ahaetulla prasina (Asian vine snake): 131199734
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Entry
131199734 CDS
T09329
Symbol
HMGB1
Name
(RefSeq) high mobility group protein B1
KO
K10802
high mobility group protein B1
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri03410
Base excision repair
apri04140
Autophagy - animal
apri04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
131199734 (HMGB1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
131199734 (HMGB1)
09143 Cell growth and death
04217 Necroptosis
131199734 (HMGB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
apri03036
]
131199734 (HMGB1)
03400 DNA repair and recombination proteins [BR:
apri03400
]
131199734 (HMGB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
apri04147
]
131199734 (HMGB1)
Chromosome and associated proteins [BR:
apri03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
131199734 (HMGB1)
DNA repair and recombination proteins [BR:
apri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
131199734 (HMGB1)
MMR (mismatch excision repair)
Other MMR factors
131199734 (HMGB1)
Exosome [BR:
apri04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
131199734 (HMGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
HMG_box_5
NOA36
Motif
Other DBs
NCBI-GeneID:
131199734
NCBI-ProteinID:
XP_058041795
LinkDB
All DBs
Position
5:complement(29235213..29243871)
Genome browser
AA seq
215 aa
AA seq
DB search
MGKGDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMARADKVRYEREMKTYVPPKGESKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTSAEDKQPFEKKAAKLKEKYEKDIAAYRAKGKPDAPKKVAPKPEK
SKKKKEEEDDDDDDEEDDEEDEEEEEEDEEEEDDE
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggtgatcctaaaaagccaagaggtaaaatgtcctcgtatgcctattttgtg
caaacctgccgggaagagcacaagaagaaacacccagatgcttcagtgaatttctcagag
ttctcaaagaaatgttcagaaaggtggaagactatgtccgctaaggaaaaggggaaattt
gaagatatggcacgagctgacaaagttcgttatgaaagagaaatgaaaacctatgtaccc
ccaaaaggagagtcaaaaaagaaattcaaggatccaaatgcaccaaagaggcctccttca
gcatttttcttattttgttctgagtatcgtccaaaaatcaaaggagaacatcctggtctt
tccattggtgatgttgcaaagaaacttggagagatgtggaataatacatctgcagaggat
aaacagccctttgaaaagaaggctgctaaactgaaggagaaatatgaaaaggatattgct
gcataccgagctaagggaaagcctgatgcacccaaaaaggtagctcctaagcctgagaaa
agcaagaaaaagaaagaagaggaagatgatgatgatgatgatgaagaggacgacgaggaa
gacgaggaagaagaagaggaggatgaggaggaagaagatgatgaataa
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