Ahaetulla prasina (Asian vine snake): 131199762
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Entry
131199762 CDS
T09329
Symbol
SOX1
Name
(RefSeq) transcription factor SOX-1 isoform X1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
apri
Ahaetulla prasina (Asian vine snake)
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
apri03000
]
131199762 (SOX1)
Transcription factors [BR:
apri03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
131199762 (SOX1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
131199762
NCBI-ProteinID:
XP_058041860
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Position
5:complement(102460814..102462491)
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AA seq
389 aa
AA seq
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MYSMMMEADMHSPGGAQVTTNLSGQTGAGGGGGGGGGGGGPKANQDRVKRPMNAFMVWSR
GQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRPR
RKTKTLLKKDKYSLAGGLLGAGGPGGGPPVAMGVGVSPAGVQRLESPGGGGPGGGGSAGG
GGGGSGGGYPHMNGWANGAYPGSVAAAAAAMMQEAQLAYSHHPGSGGHPHAHAHHPHPHN
PQPMHRYDMGALQYSPISNSQGYMSASPSAYGGISYGAQPHQNSAAAAAAAAAAAAAASS
GALGALGSLVKSEPSVSPPVTSAHSRAPCPGDLREMISMYLPGSEGGDPAAAAAAAAAAA
AAQSRLHSLPQHYQGTGTGVNGTVPLTHI
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatgatggaggcggacatgcactcgcccggtggagcccaggtcaccacc
aacctttcgggccaaaccggtgcgggaggaggaggcggcggaggtggcggcggcgggggg
cccaaggccaaccaagaccgagtcaagaggcccatgaacgccttcatggtttggtcgcgg
ggccagcggcggaagatggcccaagagaaccctaagatgcacaactccgagatctccaag
cgcctgggcgctgagtggaaagtcatgtccgaagcggagaagagacccttcatcgacgag
gccaagcgcctgcgggcgctgcacatgaaggagcacccggattataaataccggccgagg
agaaagaccaagactttgctaaagaaagacaaatattcgctggccggcgggctgctaggc
gccggtggtcccgggggcggccctccggtagctatgggcgtaggagtgagccccgccggc
gtccaacgcttggagagtcccggtggaggtggccccgggggtggcgggagcgccggcgga
ggtggcggaggctcaggcggtggctatccgcacatgaacggctgggctaacggcgcgtac
ccgggctcggtggcggcggcggcggcggcgatgatgcaagaggcacagctcgcttacagc
catcacccaggcagtggtggccacccgcacgcccacgctcatcacccgcacccgcacaat
ccccagccgatgcaccgctacgatatgggcgccctccagtacagccccatctccaactcg
cagggctacatgagcgcctcgccgtcggcctacggcggcatctcctacggcgcccagcca
catcagaactcggctgctgcggccgctgcggctgccgcagctgcggctgccgcctcgtca
ggagctcttggcgcgctggggtccttggtcaaatccgagcctagcgtcagcccacccgtc
acctcagcgcactcacgggccccttgtcccggggacctgcgcgaaatgatcagtatgtac
ttgcccggcagcgaaggcggggacccagcagctgccgccgccgccgctgcagccgcggcc
gctgcccaaagccggctccactcattaccccagcactatcagggcaccggcacgggggtg
aacggcaccgtgcccttgacgcacatctga
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