Ahaetulla prasina (Asian vine snake): 131199844
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Entry
131199844 CDS
T09329
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
131199844 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apri03019
]
131199844 (BARD1)
04121 Ubiquitin system [BR:
apri04121
]
131199844 (BARD1)
03036 Chromosome and associated proteins [BR:
apri03036
]
131199844 (BARD1)
03400 DNA repair and recombination proteins [BR:
apri03400
]
131199844 (BARD1)
Messenger RNA biogenesis [BR:
apri03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
131199844 (BARD1)
Ubiquitin system [BR:
apri04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
131199844 (BARD1)
Chromosome and associated proteins [BR:
apri03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
131199844 (BARD1)
DNA repair and recombination proteins [BR:
apri03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
131199844 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
zf-RING_6
Ank_2
Ank_4
Ank_5
Ank_3
BRCT
BRCT_2
ANK_LRRK2
zf-RING_5
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
NIBRIN_BRCT_II
Prok-RING_4
zf-RING_10
Ank_KRIT1
zf-RING_2
Auto_anti-p27
Motif
Other DBs
NCBI-GeneID:
131199844
NCBI-ProteinID:
XP_058042054
LinkDB
All DBs
Position
1:191542373..191654223
Genome browser
AA seq
753 aa
AA seq
DB search
MAQEQHPLSGTPWKETRLALRRLGECLKCSLCTNILKKPVNLGSCEHIFCLTCVGNCIGT
TCPICQVPIMKQDVKINRKLDNITKLYSKLQPLQDKDFSDREDNLSALGKKVGEAEVKKK
QIKMSFSPHSRKMKFTLKTSPKKLEQLKQSVKDSGSCNLTSIYDFVSSSPHEKPFREEQT
SQQEYKKKLKKKTLKDFSKQGNTFNGQQENSSERYKVGLNESKDPIPSSGSKNTSVLRLI
TGTELADNAGELSPRNGRPVKPKEKCSNCSFSLMPNVFGGDQTSEEWLSLAKEITQLKCD
RQFAGSPISLPKCHKTKEGTTHRKSRLLKKASEQLPGNSVAACAVSSPSLPLPGITSPLR
NLEDFASDSELPKVSRNCAEKEAFLKKFPKNLSAKRNHKGESLLHTASIEGNLSAVECLL
KKGADPNIKDNAGWTPLHEACNHGHKQIVELLIRHGALLNVTGYQNDMPLHDAAKNGHIE
IVELLLLHGASRDVVNIFGHKPVDYAETEEMKSLLMQPGKNDSSSIIQYAECINLDYCKK
GPVVLLGSGLDPDQQLLLSKLATILKVRVCTEFNSSVTHVVIPEYPVQTTMTYLLALLSG
CWILTFMWVEASFGSGTFEQEEKYEIDGGPRQSRLNTEQLLPKLFDGCYFYFLGIFKDHK
KDDLKQLVKAGGGQILLRKPKSDNDVTQTINTVAYHAEITSDQSFCTQYIIYDASSNYKP
QKVRQGKVWEVPSMWLIDCVTSFQLLPVKKLFF
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggagcagcatccgctgtctggaaccccgtggaaagaaacgcgtctggctttg
agacgattgggcgagtgcttgaagtgctccctttgtactaacattctgaagaaacctgtg
aacctagggagttgtgaacatatcttctgtctaacttgtgtaggcaactgtattggcaca
acttgcccaatatgtcaggtgccaatcatgaaacaggatgtgaaaataaacaggaaactg
gacaacatcaccaaactctatagcaaattgcaacctctgcaagacaaggatttctcagat
cgtgaagataacttgtctgctttgggaaagaaagttggagaggcagaagttaaaaagaaa
caaatcaaaatgagtttcagtcctcacagtaggaagatgaaattcaccctgaagacaagc
ccaaagaaattagagcagctgaagcaatcagtcaaggacagtggttcttgtaacttaacc
tccatctatgactttgtttcttcatctcctcatgagaagcctttcagagaggaacagaca
tctcagcaggaatataagaagaagctaaaaaaaaagactttaaaagacttcagcaaacag
gggaacaccttcaatggccagcaggaaaactccagtgaaaggtataaagtaggcctaaat
gaaagcaaagatccaatccccagttctggctcaaaaaatacctcagtgttgaggctgata
accgggacagagcttgcagacaatgcaggtgaactctcacccaggaatggtagacctgtg
aaacctaaagagaagtgtagcaattgcagcttctctcttatgcctaacgtttttggggga
gatcagacttctgaagagtggctttccttggcaaaagaaataactcagttaaagtgtgac
aggcagtttgctggctctcccatttctttgcctaagtgtcacaaaacaaaagaggggact
acccatcggaagtcacgattgctgaaaaaggcctcagagcagttgcccgggaattctgtg
gcagcctgtgcagtctcttccccatctctgccattgcctggaatcacatcacccctaagg
aacttggaagactttgccagtgattcagaacttccaaaagtgtccagaaattgtgctgaa
aaggaggcattcctcaagaaatttcccaaaaacctatcagccaagagaaatcataaagga
gagtctttactccatactgcttctattgagggtaatctttctgctgttgaatgcttgttg
aaaaaaggagctgatcccaacattaaagacaatgctggttggacaccactgcatgaagcc
tgtaatcatggacataagcagatagttgaattactgataagacacggggcactgttgaat
gtgactgggtatcagaatgatatgccacttcacgatgctgccaagaatggacatatagaa
attgtggaactgctgcttttgcatggagcttctcgagatgtggttaatatatttggtcac
aaacctgtggattatgctgaaacagaagagatgaaatcgcttctaatgcaaccaggaaag
aatgattcttcttcaattattcagtatgcagaatgcataaacctagattactgtaaaaaa
gggcctgttgttctcctcggaagtggtcttgatccagatcaacagctgctgttaagcaaa
ttggccacaattttgaaggttagagtatgtacagagtttaacagttctgtgacacatgtt
gttattcctgaatatcctgtgcaaactactatgacgtacttgctggcacttttatctgga
tgttggatcttgacatttatgtgggtagaagccagctttgggagtggcacttttgaacaa
gaagagaaatatgaaatagatggtggtcctcgacaaagccgcctgaacacagaacagctt
ttgccaaaacttttcgatggctgctacttctatttcttgggaatatttaaagaccacaag
aaagatgacctcaaacaattggtgaaagctggaggaggacagattctcctaaggaagcct
aaatcagataatgatgtcactcagacaatcaatacagtagcttatcatgctgagattaca
tctgaccagagtttctgtacacagtatataatctatgatgcctcttctaactacaaacca
caaaaagttcgtcaaggaaaggtttgggaagtgccctccatgtggcttattgactgtgtg
acgtcatttcaactattgcctgttaagaaattatttttctag
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