Ahaetulla prasina (Asian vine snake): 131199888
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Entry
131199888 CDS
T09329
Symbol
PCDH20
Name
(RefSeq) protocadherin-20 isoform X1
KO
K16498
protocadherin delta 1
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
131199888 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
apri01009
]
131199888 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
apri04515
]
131199888 (PCDH20)
Protein phosphatases and associated proteins [BR:
apri01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
131199888 (PCDH20)
Cell adhesion molecules [BR:
apri04515
]
Cadherins
Protocadherins
131199888 (PCDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
SGBP_BT4661-like
Motif
Other DBs
NCBI-GeneID:
131199888
NCBI-ProteinID:
XP_058042123
LinkDB
All DBs
Position
5:130200417..130213315
Genome browser
AA seq
971 aa
AA seq
DB search
MLRWSGGRTLQPGPHFGMRRRGNETRRSSPPTLESSWRRGKRSRRPAMGQRSSPGRRRAT
GQRTLPNVFIFLLFLEPFNCFASYSRASELFYSINEGLPAGFLIGNLAQDLQLAEGEGKG
RLARKQEADQWGKSPLSFSFASQGLGSQYINLDNQTGILCTSAQEIDRETLCLEDNVGST
VVSSSSSSPLPSSESCLLLLDVLVLPQEYFRLVKVKIAIHDINDNAPWFPVPQIHLSVPE
NSPVNTRLAIEHPAVDPDMGTNGVQTYQLQEDYGVFTLDVEENESGERTPYLIVMGALDR
EATDQYVTLIIAEDGGIPPLVGSATLTIGIGDINDNCPQFNETQISITIFGNSSIGLHIA
SVHAVDIDHGINAEISYSYSQKVSFLSRTLFRLNESTGAIKLFKRITGDTPLLHRLSVLA
NGPGCIPAVITVLVSIIKVAMRPPEVIPRFIANEAEGVVYLRELEPIHTPIAFFTIKDPD
EKYKVDCYLEGDGPFQLTPYQPYRNEYLLETTKALDYEVQQLYEVSVVAWNTEGFHVNKI
IKVQVLDDNDNSPVFSEALVELSIEENNTPHAFLTKFHATDADSGERGQVSYFLGPEAPS
YFSLDKVTGILTVSTQLDREEREKYRYTVRAVDSGVPPRESIATVTLSVLDKNDNSPRFI
NKDFSFFVPENFPGFGEIGVISVTDADVGQNGWVALSVVNRSDIFVIDTGKGVLRAKVSL
DREQQSSYVLWVEAVDGGDPPLSSTAKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLP
GSPITEVYAIDNDTGMNAVIAYSIIGRRGPRPESFKIDPKTGNITLEESLMQNDYGLYRL
LVKVSDHGYPEPLHSTVMVNLFVNDTVSNESYIESLLRRESDINIEEKEPQISIEPTHRR
AEAVSCMPTLVTLSIISLSSISLVTGMGIYICLRKGKKYHRGDEGLEVQIPLNGRIDLHR
LEKKPVEISNI
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgatggtctgggggaagaaccctccagccaggaccgcattttgggatgcgccgc
cgagggaatgagacgcggcgcagctcgcccccaaccctcgagtccagctggcggcgaggc
aaacggagccggcggccggctatggggcagcgatccagccctgggaggagaagagccacc
ggtcagaggacgctgccgaacgtcttcattttcctgcttttcttggaaccgtttaattgc
tttgcaagctacagtcgggccagtgaactcttctacagcatcaatgaaggactccccgct
gggttcctcatcgggaatctagcccaggatttacaactggcagagggagaaggaaaggga
agattggcgaggaaacaggaggccgaccaatgggggaagagtcctctttccttcagcttt
gcctcccaaggactgggaagccaatacatcaacctggacaatcagacaggtatcctgtgt
acctcagcgcaggaaattgaccgagaaacactctgcttggaggataatgttggctccacg
gtggtttcgtcttcgtcttcttctccacttccatcctcggagtcatgcttgctcttgcta
gacgtcctggtgttaccccaggagtatttccgtctggtcaaggtgaagatcgccatccat
gacatcaatgataacgcaccctggttccctgtgccgcaaatacacctctccgtgcctgaa
aattcacccgtcaatacccggttagctatagagcatccggctgtggatccggatatggga
accaatggggtgcagacataccaactccaagaagattatggggtttttacgttggacgtg
gaggagaatgaaagtggagaaagaacaccttatcttattgtcatgggtgccctggacagg
gaggccaccgaccaatatgttactcttataattgcagaggatggtggcattccgccgctg
gtgggtagtgccaccctcaccattggcatcggtgacattaatgacaactgtccccagttc
aatgagactcaaatcagcatcaccatctttggaaactctagcattgggttgcacatagct
tcggtccatgctgtggatattgatcacggaatcaatgctgagataagctattcctacagc
caaaaagtttcttttctgtcccgcacccttttccgtcttaacgaaagtacgggagcgatt
aagttattcaagaggattaccggtgacacacctcttctgcatcggctgagtgtgttggcc
aacggtcccggttgcatcccagcggtgataacggtgttggtctccatcatcaaagtcgcc
atgagacctcctgaagtcattcctcgctttatagctaacgaagcagaaggggtggtttac
ctgagagagctggaacctatccacacacccattgctttttttacaatcaaggaccccgat
gaaaaatataaagtcgactgctatttggaaggggatggccctttccagctgactccttat
caaccctatcgcaatgagtatctcttggagactaccaaggccttggattatgaggtgcag
cagttgtacgaggtctcggtggttgcgtggaataccgaggggtttcatgtgaataaaatc
atcaaagtgcaggttctggatgataatgacaactctcccgttttctctgaagccttggta
gaattatcgatagaggaaaacaataccccccacgcatttttgaccaaattccatgccacg
gatgctgacagtggagaaagaggccaagtgtcctacttccttgggcccgaggcgccttcc
tatttttccttagacaaagttactgggatccttaccgtttctacccagctggatagagaa
gagcgtgagaaataccgctacaccgtcagagctgtggattctggcgtgcccccacgagaa
tccatcgccaccgtgaccctctctgtgttggataaaaatgacaacagcccgagatttatc
aacaaggatttcagtttcttcgtaccggagaatttcccgggcttcggagaaattggagtt
ataagtgtcaccgatgcagacgttgggcaaaacggatgggtagccctttctgtggtcaac
aggagcgatatttttgtgattgacactggcaaaggtgtgttgagagccaaggtctctctc
gacagggaacagcagagctcctacgtcttgtgggttgaagcagtggatgggggtgacccg
cctttgtcctcgacggctaaaatcactatccttttattagacataaatgataaccccccc
ttagttttgttcccccagtctaacatgtcttaccttctagtccttccttccacattgccc
ggatctcctatcacagaagtctatgctatagataacgataccggcatgaatgctgttatc
gcctacagcattatcgggaggagaggccctcggccggagtccttcaagatcgaccccaaa
acaggcaacatcaccttggaagagtcgctcatgcaaaacgattatggcctgtaccgcctt
ctggtgaaggttagcgaccacggttatccagaacctctccattccaccgtcatggtcaac
ctcttcgtcaatgacaccgtgagcaacgagagctacatcgaaagccttctgaggagagaa
tccgacatcaatatcgaggagaaggaaccccaaatttccatagagcccacccaccggaga
gcagaggccgtgtcctgcatgcctactttggtgaccctctctataataagcttgagttcc
atcagcctagtgacaggtatggggatttatatttgcctaaggaaggggaaaaaataccac
aggggggatgagggtttggaagttcaaatcccattaaatgggagaattgacctgcatcgg
ctagagaagaaaccggtggaaatttccaatatctga
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