Ahaetulla prasina (Asian vine snake): 131200059
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Entry
131200059 CDS
T09329
Symbol
RFC3
Name
(RefSeq) replication factor C subunit 3 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri03030
DNA replication
apri03410
Base excision repair
apri03420
Nucleotide excision repair
apri03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
131200059 (RFC3)
03410 Base excision repair
131200059 (RFC3)
03420 Nucleotide excision repair
131200059 (RFC3)
03430 Mismatch repair
131200059 (RFC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apri03032
]
131200059 (RFC3)
03036 Chromosome and associated proteins [BR:
apri03036
]
131200059 (RFC3)
03400 DNA repair and recombination proteins [BR:
apri03400
]
131200059 (RFC3)
DNA replication proteins [BR:
apri03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
131200059 (RFC3)
DNA Replication Termination Factors
ELG1-RFC complex
131200059 (RFC3)
Chromosome and associated proteins [BR:
apri03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
131200059 (RFC3)
DNA repair and recombination proteins [BR:
apri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
131200059 (RFC3)
Check point factors
HRAD17(Rad24)-RFC complex
131200059 (RFC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA
AAA_22
AAA_16
AAA_2
ABC_tran
AAA_11
DUF2247
CHB_HEX
Motif
Other DBs
NCBI-GeneID:
131200059
NCBI-ProteinID:
XP_058042381
LinkDB
All DBs
Position
5:30388913..30415378
Genome browser
AA seq
356 aa
AA seq
DB search
MSLWVDKYRPTSLCKVDYHREQAAELRNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GSGVEKLRIEHQTITAPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQELLKTVAQSQQ
LETNTQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMATCRLILCCNSTSKVIAPIRSRCL
AVRVPAPSIGDICTILSNVCKKEGLTLPQELARRIAEKSGRNLRKALLMCEACRVQQLPF
TPDQDISESDWEVYLRETANAIVSQQTPQRLFEIRGRLYELLTHCIPADIIIKGLLSELL
NNCDGQLKGEVAQMAAFYEHRLQLGNKAIYHLEAFVAKFMALYKKFMEDGLEAMIF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagcctctgggtggacaaataccggccgacctcgctctgcaaagtagattatcaccga
gagcaggcggcggagcttcgcaatctggttcagtgtggtgattttcctcatctcttagtt
tatgggccttcgggagctggaaagaagacaagaataatgtgtttactaagagagctgtat
ggttctggagtagaaaaactgaggattgaacatcaaactataacagcaccctctaaaaag
aaaattgaaatcagcactattgcaagcaactaccatcttgaagttaatccaagcgatgca
ggtaacagtgaccgagttgtaatacaggagttgctgaagacagttgcacagtcacaacaa
cttgagacaaatactcaacgtgattttaaagtggtgctgttgacggaagtggacaagctt
acaaaggatgctcagcatgcgttgcgaagaacaatggagaagtatatggccacctgcaga
ttaattctttgttgcaattctacatcaaaagtcattgcacctatcaggagcagatgcctt
gcagtgcgagtccctgctccaagtattggagatatctgtaccattttatcaaatgtttgc
aagaaggaaggcctgactctccctcaagaattggctcggagaattgctgaaaaatctggg
aggaatctcagaaaggctcttctgatgtgtgaggcatgcagagtacagcagcttcctttc
acgcctgatcaagacatttctgagtctgactgggaagtatatctgagagagacagccaat
gctattgtcagtcagcagacaccccagagactatttgaaatccgtgggcgactttatgaa
cttttaactcattgtattcctgcagatattataataaagggccttttgtctgaacttctg
aacaactgtgatgggcaactaaaaggagaagtcgcacaaatggcagctttctatgagcat
cgattacaactgggcaacaaagctatttatcacctggaagcatttgtagccaaattcatg
gccctttataaaaaatttatggaagatggacttgaagctatgatattctaa
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