Ahaetulla prasina (Asian vine snake): 131200206
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Entry
131200206 CDS
T09329
Symbol
LMO7
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
131200206 (LMO7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
apri04121
]
131200206 (LMO7)
Ubiquitin system [BR:
apri04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
131200206 (LMO7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
PDZ
PDZ_2
PDZ_6
zf-Vps39_C
Motif
Other DBs
NCBI-GeneID:
131200206
NCBI-ProteinID:
XP_058042690
LinkDB
All DBs
Position
5:complement(121783190..121976310)
Genome browser
AA seq
1984 aa
AA seq
DB search
MDSREDGRAAFVEARRWVEAVTGKSFGSKSFRAALENGILLCDLINKIKPGIIKKINRLS
TPIAGLDNINVFLKACENLGLKEAQLFHPGDLQDLSNRVTVKQEETDRRIKNVLITLYWL
GRKAARSPYYHGPHLDLKAFEKLLGQALTKALGESYSPKQSGRDSGYGDFWCADPLSLST
SHKRDDSLDSLDSFGSRSSTSFSSDLTLKGGSEDFESDTDSETRARMHDPGKDDMSYRRV
ALIEPKPAAEFNRFLPNKAKPPTYMPAPLRKKRIEKNEDNRRSWASPVFTEPDGNFSSNH
RRILGPRMEFKSATYILSDFSNYLEEEEEEEEKTTGIPDIETDDFYARKISAAVSSAVKV
SSHKFLPKTWAPGEALHWKKAQRISFSKQWYKEIQGFSNMGDAKEEDARVQPSHSIADSL
GIGCQEDSQPIKPTAEIAAGEMRGHSSELPSQFLFLRALQKYSEDYLNSDHRTKADPSSG
PRLITCRKYNYLRPGYDQRIHEIRDFYPDLENDDLFVRKTGASHANPVVLQDFEYFRRSC
QQRPRVEGEIVLQPRDGEDEIIPDLEKDDLTVRKAQLQKKEVPLSGAPDKYQPALFPDPW
SLPPEIQAKFLCLLEKSTLKSESEQRGKVLSPSSRQKKDDMLTRKMELLSLGGNVQSKSF
CPGACSKEDMEKWEAIREASKTRHKKRQMVERLLQKISEEHGSKSLNDVSADELQTIRQM
RYDELQKIKTQLREQDQQWQDDLAKWKSRRRSHTSDLQRKKEEREEIERRTSESSERRSK
TLREMQRDRERRDQAPLRNSWQETEQLYFSNDDVFREEKASPKVCAPTEANGGLKREDDH
ELRKRKPERVVKDEPLASVDSLAGERTESPLPSSQSSNAQTGSGRVSASLSRSYQKTDTA
RLTSVVTPRPFGAPMRGISSLPRSFTMDSVVKYNGGLEGPRGAQSGHSRGSEAQTGGVQG
QGKMEPQVAEDSKTRTSHLLEEQRRGTPESEPKTDHHPSSNSMTVASSAPKERTFSATEE
SRRHEQYSDMRISINQKPGSSRNFGFAVSQNPSGVFVKSIEEGSPADFCQLKVGDEILSL
GSIGISHLEQGEWEASINQALENGRLIMDVRRHGKKDWGKDQPFPPFARHKILNLTSMAT
NIIGTPENKWIDATSGDRASTQSHQMSEKEVHSHLKNDGSETKVNGMQDDTSSYDRKDTE
PISLKNLKRRSQFFEQGGQEPAILDLPVPPIVASSRWTWDQEEERKRQEKWQAEQERLLQ
EQYKREQERLKEEWLKAQQEAEKDISSYLKEEQTNLTSPAMTGSIQEASTSLWERNGSNR
TAYLSSERNWEEESKPENQRKDSELAKSSLQQQGVLQVEQKRKLQEIENRKEWNGQDTVF
YAKEPSYPEEVPQKPQVEPVKESRHWEETSQNLLMDPIKEPNHGGKTSQNLLFEPIKEPG
YQEETSQKLVLEQFKEPRLWEEVTHKTHVEIVKDLRYQGKTSPNLLMEPIKEPRYQEGAS
QDLLMEPIKEPRYREEASRDLLMEPIKEPRNWEETSKDLLIEPIKEPRYHDEASQKLLVE
PIKEPRYWEEASQKLLVEPIKEPRYREEAPQDLLMEPIKEPRYHDEASQKLLVEPIKEPR
YREEAPRDLLMEPIKEPRYWEETSKDLLMEPIKEPRYQEEASQKLLVEPIKEPRYREQAS
QKLLVEPVKEVSMQRFQYQRHYESPRLSNEQGKHFNVDRNKSRSTTDLDNPQTSGLKKKF
SEQSWNTTNSLKRSQKEQGLSAAELERQQILQEMKKRTSLHTDSSWIRQRNSSVHKEPFS
LTGSRMRRGESLDNLDSSRTNSWRPHSWMNQSASSTSLSSSQEFGQHIPPVVSTSNRAYM
RTPSSSLPSPSSASMKTSSLPHIPTSPSVPQAPSPTSSQSGTQQRNRSVSGKRMCSSCRN
TLGKGAAMIIESLGLCYHLHCFKCVACEGDLGGSQAGAEVRIRNSELFCNSCYLRFKTGH
TTAM
NT seq
5955 nt
NT seq
+upstream
nt +downstream
nt
atggacagccgagaggacggccgcgcagcttttgtcgaagcccgccggtgggtcgaggcg
gttaccgggaaaagtttcggaagcaagagttttcgcgctgctttagaaaatgggatcctt
ctctgcgatctaatcaacaagatcaaacctggcatcattaaaaagatcaaccgtctgtca
acaccaatagctggactggataatatcaacgtctttttgaaagcttgtgaaaacctggga
ttaaaagaagctcagctttttcatcccggtgaccttcaggatttatctaatcgagttacc
gtcaaacaagaagaaactgaccgaagaataaaaaatgttttgattaccttatactggctg
ggcaggaaagcagctcgtagcccttattatcatgggccccacctggatttgaaagccttt
gagaaattgcttggacaagctttaaccaaggccctcggggaatcctacagccccaaacaa
agtggaagggacagcggatacggggatttctggtgcgctgatccgctttcattgtccacc
agccacaagcgggacgattccttagacagcttggattcttttggctccagatcttctacc
agtttctcttcggatctcacgctgaaaggtggcagtgaagattttgagagtgacacggat
tctgaaacccgcgccagaatgcatgatcccgggaaagacgacatgtcctatcgccgagtg
gccttaattgaacccaagcctgctgctgaattcaaccgtttcctgcccaacaaagccaag
ccaccaacttatatgccagcgcccttaagaaagaagagaatcgagaagaacgaagataac
agaagaagctgggcgagtcccgtctttacggaaccggacggaaatttttcgagcaaccac
agaagaattttggggcccaggatggaattcaagtcagcaacttacattctttcagacttc
tccaactatttggaggaggaggaagaggaggaagagaaaaccacgggaatcccagacatt
gaaacagatgacttttacgctcgcaaaataagtgctgctgtatcatcagctgtaaaagtc
tcctctcataaatttctccctaagacttgggctccgggtgaagcgttgcactggaaaaaa
gcacaaagaatctctttttccaaacagtggtataaggaaattcaaggattcagtaacatg
ggagatgccaaagaggaagatgcaagagtccagcccagccatagcatcgcagacagcttg
ggtatcggatgccaagaagactctcaacccattaagccaacagctgaaattgctgcaggc
gagatgcgtggccattcctctgagctgccaagtcagtttttatttcttcgagccctgcaa
aaatattccgaggactacctgaattctgatcatagaaccaaagctgacccatcttcaggg
cctcggctcataacgtgcagaaaatataattaccttaggccaggctatgaccaaagaata
catgagattagagacttttatccagatttggaaaacgacgatttgtttgtccgtaagact
ggtgcctcccacgcgaatccagtcgttctccaggattttgagtattttaggagatcttgt
caacaaagacctcgcgtcgaaggggaaattgttcttcagcccagagatggggaagacgaa
ataattccagatttagaaaaagacgacctcaccgttcgcaaagctcaactgcaaaagaaa
gaagtgcctttatctggtgcccctgacaagtaccagcctgctcttttcccggacccttgg
agtctacccccagaaattcaggccaaatttctatgcttgctggagaagtccaccctcaag
agcgagtctgagcagagaggaaaagtcttatctccttcttcaaggcaaaagaaggacgat
atgttgacccgaaaaatggagctgctcagcctaggaggcaacgtccaatccaagagcttc
tgcccaggagcgtgtagcaaagaagatatggaaaaatgggaagccatcagagaggccagc
aaaaccaggcataagaaacggcaaatggttgaaaggctgttgcaaaagatttctgaggaa
cacgggagtaaatccttgaacgacgtcagtgcagatgaactacaaacgatccggcagatg
cgttacgacgagctccagaaaatcaaaactcagctgcgggaacaagaccaacagtggcaa
gacgatttggcaaaatggaaaagtaggcgcaggagtcacacctctgacctgcaaaggaaa
aaggaggagagagaagaaattgagcgaagaacttcggaaagctctgaacggcgcagcaaa
accctgagagaaatgcagagggacagagagaggcgagatcaagctcctctgaggaactct
tggcaggagacagaacaattgtatttctcgaacgatgacgtctttcgggaagagaaagcg
tctcccaaagtttgcgctccaaccgaggcaaatggaggcttgaaaagggaagacgatcat
gagctgaggaaacggaaaccagagcgtgtggtgaaggatgagcctctcgcctcagtagac
agcctagctggagaaaggacggagtcccctttgccaagttcccagtcatccaatgcccaa
actggatctggtcgggtttcagcctccctatcgaggagttatcagaagacggacacagcc
aggctgacatcggtggtcaccccgaggccgtttggagcccctatgagaggaatctcctcg
cttcccaggtcctttacgatggattcagttgtgaaatacaatggaggactggaaggtccc
aggggtgctcagtcagggcatagcaggggctccgaggctcagacaggaggagttcaaggc
caaggcaagatggagccccaagttgcagaagacagcaaaaccagaacaagccacttgctg
gaggagcagagaagaggaacgcctgagtcagagcctaaaacagatcatcacccgagttca
aactcgatgactgtcgcatcttctgcccccaaggagagaactttttcagcgactgaggag
tcaagacggcacgagcaatacagtgatatgagaatcagtataaatcagaaaccaggcagc
agtcgtaactttggatttgccgtgtcccagaatccttctggtgtcttcgtgaaatcaata
gaagaaggcagccctgcagatttttgccagttgaaagttggggatgaaatcctatccctt
ggcagcatcggcatttcacacctggagcagggcgagtgggaagcttccatcaaccaggcc
ttggaaaatggacgcctcatcatggacgtgaggcggcatggaaagaaggattggggcaaa
gaccagcctttcccgccatttgcaaggcacaaaatcctcaatcttaccagtatggctacc
aacattataggtacacctgaaaacaagtggattgatgccacatcaggagaccgcgcttca
acgcaaagtcatcagatgtcagaaaaggaggtgcacagccatttgaagaatgatgggtct
gaaacaaaagtcaatggaatgcaagatgatacaagctcctatgatcgaaaagacacagaa
cctatttctttgaaaaacttaaaaaggcgatcccagttttttgaacaaggaggccaggaa
cctgcaatacttgacctccctgtcccacccattgtggcttccagccgttggacttgggat
caagaagaagaaagaaaaaggcaagagaaatggcaagcagagcaggagcgcttactccag
gagcagtacaaacgtgagcaagagaggcttaaggaagagtggctgaaagcccagcaggag
gcggaaaaggacatctccagctacttaaaggaggaacagactaacctgacatcccctgct
atgaccgggagtatacaggaagcctcaacttccttgtgggaaagaaatggaagtaacagg
actgcttatcttagttctgaaagaaattgggaagaggaaagcaagccggagaatcagagg
aaagatagtgagctagcaaaaagcagcttacaacaacaaggagtgttacaggtggagcaa
aagagaaagttacaagaaatagaaaacaggaaggaatggaatggacaagacacagtattc
tatgcaaaggaaccaagttatccagaagaagtacctcaaaaaccacaggtggaacctgtc
aaggaatcaaggcattgggaagaaacatctcaaaaccttctcatggacccaattaaagaa
ccaaaccatggtgggaaaacatctcagaatctgctttttgaacccatcaaagaaccaggg
tatcaggaagagacatctcaaaagttagtgctggaacaattcaaggaaccaaggctttgg
gaagaagtaactcacaaaactcatgtagaaatagtcaaggatttaagataccagggaaaa
acatctccaaacctgctgatggaacctatcaaggaaccaaggtatcaggaaggagcatct
caggatctgctgatggaacctatcaaggaaccaaggtatcgggaagaagcatctcgggat
ctgctgatggaacctatcaaggaaccaaggaattgggaagaaacatctaaggacctgctg
atagaacctatcaaggaaccaaggtatcatgatgaagcatctcaaaagctgttagtggaa
cctatcaaggaaccaagatattgggaagaagcatctcaaaagctgttagtagaacctatc
aaggaaccaagatatcgggaagaagcacctcaggacctgctgatggaacctatcaaagaa
ccaaggtatcatgatgaagcatctcaaaagctgttagtagaacctatcaaggaaccaagg
tatcgggaagaagcacctcgggacctgctaatggaaccaatcaaggaaccaaggtattgg
gaagaaacatctaaggacctgctgatggaaccaatcaaggaaccaagataccaggaagaa
gcatctcaaaagctgttagtggaacctatcaaggaaccaaggtatcgtgaacaagcatct
caaaagctgctggtggaaccagtcaaggaggtttcaatgcaaagatttcagtatcaaaga
cattatgaatcaccaagactctccaacgagcaaggaaagcacttcaatgtcgacagaaat
aaatccagatcaactactgatttagacaatcctcagaccagtgggctgaagaagaagttt
tctgagcaatcctggaataccaccaactcgctgaaaagatctcagaaggaacagggcttg
tcagctgctgagctggaaaggcagcagatccttcaggaaatgaagaaaaggacctctctg
cacaccgacagcagctggatccggcaacgcaactccagcgttcacaaagagcccttcagt
ctgaccggcagtagaatgaggagaggtgagagcttagataatcttgactcttcaagaaca
aactcttggagacctcattcctggatgaaccagtctgcatcttctacatctttgtcaagc
agccaagaatttggccagcatattcctccagtggtgtccacctccaatcgggcctacatg
cgcaccccatcttccagtcttccctccccttcctctgcatctatgaaaacgtcttccttg
ccccacatccccacatcaccttctgttcctcaagctccatcgccaacttcttctcagtct
gggactcaacagcgcaacaggtcggtgagtggaaagcgaatgtgttccagctgcagaaac
actctgggcaaaggagcggccatgatcatcgaatctcttggcctttgctatcacttacat
tgttttaagtgtgttgcttgcgagggggacctcggaggatcacaagctggagcagaagtc
cgtatccggaacagcgaactcttctgcaacagctgctatctcagatttaaaactggacac
acaaccgccatgtga
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integrated database retrieval system
