Ahaetulla prasina (Asian vine snake): 131200376
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Entry
131200376 CDS
T09329
Symbol
LDB3
Name
(RefSeq) LIM domain-binding protein 3 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
131200376 (LDB3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
apri04990
]
131200376 (LDB3)
Domain-containing proteins not elsewhere classified [BR:
apri04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
131200376 (LDB3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
zf-C3HC4_3
LIM_FHL2-3_N
PDZ_2
DUF3854
Motif
Other DBs
NCBI-GeneID:
131200376
NCBI-ProteinID:
XP_058043013
LinkDB
All DBs
Position
6:complement(2838378..2999865)
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AA seq
680 aa
AA seq
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MSFSVTLNGSGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQMSQGDMVVAIDGVNTDGM
THLEAQNLIKSANYNLNLTLQKSKRPIPMSTSIPRIDSPMPVIPHQKVVTNPVTNTEYVE
RFNPNVLKDSALSTHKPIEVKGPGGKATIIHAQYNTPISMYSQDAIMDAIAGQAQAQGGE
FAGNLPVKDPHVDSASPVYQAVLKTQNKSEDELDDWSRRSSNLQSKSFRVLAQMTGTEYM
QDPDEDALRRSSGKKHVAVATENSTPVEHEPVSISCAPSAMPAASASPSSSSAVAAAASH
SGVHRMTLLPASISSGAYDSISSSCQSFHHQASTSISYQSRKRGQAYTSAPAPHGPAPHG
PVPHGPAPHGPAPHGPAPYTGYSEAPVPAPKPRVVTTASIKPSVYHPAAPAPAPPSVSTH
TYIPSQVEPASRPPWVTDDSFSQKFAPGKSTTTITKHILPKGAPVPPSSAPPPSIPASIQ
APAIARGTIQRAERCPASSRAPLCGHCNSIIRGPFLVAMGRSWHPEEFYCAYCKTSLADV
GFVEEQNSVYCERCYEQFFAPTCARCHTKIMGEVMHALRQTWHTTCFVCAACRKPFGNSL
FHMEDGEPYCEKDYVALFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQ
PFYSKKDKPLCKKHAHAINV
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcagtgtgactctcaatggatctggaccatggggcttccgtctgcaaggaggg
aaggacttcaacatgcctttgaccatctccaggatcacccctggcagcaaggcagcccag
tctcagatgagccagggagatatggtggtagccattgacggcgtcaacacagatggcatg
acccacctagaggcccagaatctgatcaaatcagcaaactacaacctgaatcttactctt
caaaaatcaaaacgtccaattccgatgtcaacaagcatcccaaggatcgattctcccatg
cccgtgatccctcatcaaaaggtggtaaccaatcctgtgaccaacaccgagtatgtggaa
cgtttcaaccccaacgtcctgaaggattctgctctgtccacgcataaacccatagaggtg
aaaggccccgggggcaaagccaccatcattcatgcccaatataacacccccatcagcatg
tattctcaagatgctatcatggacgccattgcaggccaagctcaggcccagggtggtgaa
ttcgctggtaaccttcctgttaaagatcctcatgtagacagtgcgtctccagtctatcag
gctgtgcttaaaactcaaaacaagtctgaagatgagctggatgattggagccgccgatct
tccaacttgcagtcaaagtccttccgagtccttgctcagatgacaggaactgagtacatg
caagatccagatgaagatgccttgagaagatcaagtggcaagaaacatgttgctgtggcg
actgaaaacagtacccctgttgagcatgagcctgtgtctatcagctgcgctccttctgct
atgcctgctgcttcggccagtccgtcgtcgtcttctgctgttgctgctgctgcttctcac
agtggtgtccatcggatgacgctgctgccagcttctatttcatctggagcttatgactcc
atctcatcctcctgccaaagcttccaccatcaagcttcgacttccatctcctaccagtcc
cgcaagagaggccaagcctacacttcagccccagctccccatggcccagctccccatggc
ccagttccccatggaccggctccccatggaccagcaccccatggaccagctccttacaca
ggctacagtgaagccccagtgcctgctccgaagccaagagttgtgaccactgcaagcata
aagccctcggtctatcatccagcagctccagcacccgcgccaccatcggtgtccacacat
acctatattccaagccaagttgaacctgcaagtcgtcccccatgggtgacggatgactcc
ttctcccaaaagtttgctcctgggaaaagtacaaccaccatcaccaagcacattctgcca
aagggtgctccggtgcctccatcttctgccccacctccctcaattcctgcatccatccag
gctcctgctatcgcgcggggaacaatccaaagagcagaacgctgccccgccagtagccga
gctccgctctgtggacattgtaatagcatcatcagagggcccttcttggtagccatgggt
cgctcttggcaccctgaggaattctactgtgcttattgcaagacctctctggctgatgtg
ggctttgttgaagaacagaatagcgtctactgtgagcgttgctacgaacagttctttgcc
ccgacttgtgccagatgccataccaagatcatgggggaagtgatgcatgctttgaggcaa
acttggcacaccacttgctttgtttgcgccgcctgtcggaagccatttggaaacagcctc
ttccacatggaggatggagaaccctactgtgagaaagactatgttgccttattcagtacc
aaatgtcatggatgcgacttccccgttgaggctggagacaagttcatcgaagcccttggt
cacacctggcatgatacatgcttcatttgtgctgtctgccatgtcaatttggaaggtcaa
ccgttttattcgaagaaagataaacctctgtgcaagaaacatgcccatgccatcaatgtc
taa
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