Ahaetulla prasina (Asian vine snake): 131200462
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Entry
131200462 CDS
T09329
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131200462 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apri03019
]
131200462 (EXOSC1)
Messenger RNA biogenesis [BR:
apri03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
131200462 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
131200462 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
Motif
Other DBs
NCBI-GeneID:
131200462
NCBI-ProteinID:
XP_058043219
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All DBs
Position
6:complement(61803389..61809860)
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AA seq
269 aa
AA seq
DB search
MKLHFPSFNALQGPFFSAGLLVTVTLLQHPRFGRGLLFRRTRAWRKSCERGIAQWKFQLP
AGNRRPSANSFLLPGMAASRYCVPGERLCSLEEGTPGNGTYTRHGSIFASLAGCFIKKSE
NGMLPVISVMRDVESQLLPDVGATVTCKVCSINSRFAKVHILYVGSTPLKSPFRGTIRRE
DIRATEKDKIEVYKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSEAGLQMVP
ISWCEMQCPSTHGKELRKVARVQPQFLQT
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgaaactacacttcccgtcattcaatgcgcttcaagggccattcttttccgccggcctc
ctagttacagttactctgctgcaacatccgagattcggtcgtgggctgctattcagaaga
acgcgtgcttggaggaagtcatgtgagcgtggaatcgcccaatggaaattccagctaccc
gcggggaacaggcggcctagcgcgaactcctttctgttgcccggcatggctgcttcccgc
tactgtgttcctggagagcgactctgcagtttagaggaaggaacccctgggaatggtacc
tacacacgccacggttccatctttgcctctttggctggttgtttcataaagaaaagtgag
aatggcatgctcccggtaatctctgtgatgagagatgtggaatctcagctactgcctgat
gtgggagccacagtgacctgcaaggtttgcagtattaactctcgttttgccaaggtgcat
attttgtatgttggttctacaccattaaaatccccattccgtggaacaatacggagagaa
gatatccgagctacagaaaaagacaagatagaggtttacaagagtttccgcccaggagat
attgttttggccaaagttatctctttaggagatgcacaatcaaattatttgctgaccaca
gcagaaaatgagctgggggtagtggtggctcatagtgaagcaggtttacagatggtgcca
atcagctggtgtgaaatgcagtgtcccagtacacatggcaaggaactgcgcaaagtagcc
cgggttcagcctcaatttctgcagacatag
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