Ahaetulla prasina (Asian vine snake): 131200508
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Entry
131200508 CDS
T09329
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
131200508 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
apri04131
]
131200508 (VPS8)
Membrane trafficking [BR:
apri04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
131200508 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
TPR_VPS8_2
Clathrin
zf-RING_Vps41
WD40_CDC20-Fz
zf-RING_11
zf_RING_Vps8_fungal
zf-RING_2
zf-RING_UBOX
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
131200508
NCBI-ProteinID:
XP_058043331
LinkDB
All DBs
Position
6:65967186..66107007
Genome browser
AA seq
1401 aa
AA seq
DB search
MEEAFKTATQSLDLDQGCFSMMDESSQQEAPSPKLSITELSKELDSKSELIDDKEFDIPQ
VDTPPTLESILNETDDEEEPFVLEDPSLLNIDNIDTHSYDTSSVASSDSGDKSHLKRKKK
LRDSFSIHGSVIRLSLLKGISTQIVSAAAKVDAGLPTAIAASSLIAVGTSHGLALIFDPN
QALRLCLGNTAVGAQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSIIDAHPP
GTAILHIKFTDDPTLAICNDSGGSVFELSFKRVMGVRTCESRCLFSGSKGEVCCIEPLHA
KAELRDHPITQYSLLAMASLTKILVIGLKPSLKVWMTFPYGRMEPSSVPLLAWYFVAAQT
SVNPVLAFCRGDVVHFLLVKRDESGAIHVTKQKQLHLHYDLINFTWINSHTIVLLDSVEK
LHVIDRHTQEELETVEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISNCGGQ
IFYLGTKSVHVLTLRTWRERIDHLLKQECLNEALALSWSFHEGKAKAVVGLSGDEQKRKA
VVADRMVEILIHCADRTMKKCPEQGKIQVMEQHFQTMVPVIVDYCLLLQRVDILFGQMYD
KMSENSVAKGVFLECLEPYILSDKLVGITAQIMKDLLLHFQDKNLMANMEACIVHMDITS
LDIQQVVLMCWENHLYDAMIYVYNSGMNDYITPMEKLFKAIAHPLSAGKSLSDEQVIMGN
KLLVYISCCLAGRAYPLGNIPEDLVPLIKNQVFEFLIRLHSAEAPTDEEVYPYVRTLLHF
DTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLAQQLA
KPNNTLFVNRMLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEENRLIQMAEKA
EFYQICEFMYEREHRYDRIIDCYLHDPLRKEEVFSYIHNILSIPGYSTEEKQSVWQKTMK
HIEELTSVSPFKTADLISIHFSDEIEQIIQILQDEHLLFQFLKSLLDPREGINQDLLQLS
PSITEQFIDLLCRYDADQVLETLKFLESYRPEEIIQVTQKYQLHEASSYLLEKKDDIPGA
FLIMLEWLQSKLSALTSGDKTQLPLLKDIEGTLAKTIALCQRNSHKFNQQEREALWFPLL
EAMLSPQRSALLPCYSEYLKNLTMQVLNNMTTFIALPLILQRILQDPVYGKGKLGEIQSL
VLGMLDSFNYEQTLLETTTSLLNRDLHWSLRNLKASMTRGLNPKQDYCCICLQQYKRRQQ
TGDQIVVFSCGHLYHSLCLLSKECGTETTGQMRWTCFKCSASHKGEKVSLTSLEMKKRTP
VSLAQTSSECLLDPQQAQAFDQLCRLYRGTSRLALLTELSRDHGGEKHGFVQVSQGSSAL
NSVFQNETFQLHLNPPPLLED
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagctttcaaaactgcgactcaaagccttgatttagatcaaggttgtttctct
atgatggatgaatccagtcaacaagaagccccgtctcccaaattatctattactgaattg
agcaaagagttagattcaaagagtgagctgattgatgacaaagaatttgatattcctcaa
gttgatactcctccaacattagaaagtattttaaatgaaactgatgatgaagaagagcca
tttgttcttgaggatccttctcttttgaacattgataacattgatactcattcatatgat
acttcgtcagtagcaagctctgatagtggagataaatcacatctaaaaagaaagaagaaa
ctccgtgattcattctccatccatggctcagttatacggctgtcacttttgaagggtatt
tctacccaaatagtatctgcagcagccaaagtggatgcaggtttaccgactgcaattgca
gcatcaagtcttatagcagtaggaacatcccatggtctagctttgatatttgatcctaac
caggctcttcggctttgcttgggcaatactgctgttggtgcacagtatggggctatatct
gctcttagcatcaacaatgactgttcgagacttctgtgtggctttgcaaaaggacagatt
acaatgtgggatctggccagtggaaaactgttacgatcaataatagatgcacatcctcca
ggaactgcaattttgcacattaagtttacagatgatccaactctcgcaatctgcaatgac
agcggtggttcagtatttgaactgtcattcaagagagtaatgggtgtgagaacgtgtgaa
tctcgctgtttgttcagtggttcgaagggagaggtttgctgcattgagcctttacatgcg
aaggctgagctgagagaccatcctatcacccaatattctctgctagctatggcttcctta
acaaagattcttgtgattggattgaagccatctttgaaagtgtggatgacattcccatat
ggtcgtatggaaccatctagtgttccactgcttgcctggtattttgttgctgcccaaaca
tctgtgaatccagtgcttgctttctgtcggggagatgtggtccatttccttctggtaaaa
agagatgaatctggagcaatacatgttacgaagcagaagcagctacacttgcattatgat
ttaatcaattttacatggataaactcccatacaattgtgcttctagacagtgtggaaaaa
ttacatgtgatagatcgtcatacacaggaggaacttgagactgtagaaatatcagaagtt
cagctagtatacaatagcagccacttcaaatcgttggcaacaggaggcaatgttagccaa
gcactggcactggtaggtgagaaggcttgctaccagtcaatcagcaactgtggtggtcag
attttttatttgggtacaaagtctgttcatgttttaacactgaggacctggagggagagg
atcgatcaccttctgaaacaagaatgtcttaatgaagcattggctttgtcgtggtccttt
catgaaggaaaagccaaagctgttgtgggcttatctggggatgaacaaaaacggaaggct
gttgttgcagacaggatggttgaaatacttattcattgtgctgatcgaaccatgaagaaa
tgtcctgagcagggtaaaatccaagttatggaacaacattttcagactatggtccctgtc
attgttgactattgtcttctgcttcagcgagtagatatattatttggtcaaatgtatgac
aagatgagtgaaaattctgtagcaaagggagtgtttttagaatgtcttgagccatacatt
ttaagtgataaattggttggaatcacagctcagattatgaaggatttgctacttcatttc
caagataagaacttaatggcaaacatggaagcctgcattgtacatatggatattaccagc
cttgatatacaacaggttgtccttatgtgttgggaaaaccacctatatgatgccatgata
tatgtctataacagtggaatgaatgactacattactccaatggagaaattgttcaaagcc
attgctcatccacttagtgctggaaaatctctctcagatgagcaagtcattatgggcaac
aaactgcttgtctacataagctgctgtttggcaggccgagcttacccattgggcaatatt
cctgaagacctggtaccactgattaaaaaccaagtctttgaattccttatccgtctgcat
tcagctgaggcccctacagatgaagaagtgtatccctacgttcgtacactgttgcacttt
gatacacgagagttccttaatgttcttgcactgacatttgaagattttaagaatgacaag
caagctgtggaataccaacagagaattgtggacatattactcaaggttatggtggagaac
tctgattttaccccatcacaagttggatgcctttttactttccttgctcaacagcttgct
aagccaaacaacacattgtttgtgaataggatgctatttgaccaggtccttgaatttctc
tgcagtcctgatgatgattcacgacattctgaaagacagcaggttcttttagaattgctt
caggctggaggtatagtgcagtttgaagaaaacagactcattcaaatggcagaaaaagct
gaattttaccaaatctgtgaatttatgtatgaacgggaacatcgctatgataggataatt
gattgctacttgcatgatcccttgagaaaggaagaagttttctcctatatccacaatatt
ctttccattcctgggtatagtacagaagaaaagcaatctgtgtggcagaaaactatgaaa
catattgaggagctgacatcagtgagtccttttaaaacagcagatcttatttctattcat
ttcagtgacgagattgaacaaataattcagattctacaggatgaacatttacttttccaa
tttttgaagagtctccttgatccaagggaaggtatcaatcaagatttgcttcagctttct
ccctctattactgaacagtttattgatttgctgtgtcggtatgatgctgaccaggtctta
gagactttgaagttcctggagtcctatagaccggaagagataattcaggtcacccaaaaa
tatcagctccatgaggcttcttcttacttgcttgaaaagaaagatgacattcctggtgcc
ttcttaattatgcttgagtggttacaaagcaagctttcagcactgacttctggagataaa
acacaacttcctttactaaaagatattgaaggtaccttagcaaaaacaattgcactttgc
cagaggaattcacacaaatttaatcagcaggagcgagaagcactgtggtttccgctccta
gaggcaatgttgtcaccccaaagatctgcactgctaccctgttactctgaatatttgaag
aacttgacaatgcaagtattgaacaatatgacaacattcattgctctgccattaattttg
cagagaatcctacaggatccagtatatggaaaaggaaaacttggagaaattcagagtctt
gtactgggtatgctagacagctttaactatgagcagactcttttggagacaacaacaagc
ttacttaaccgtgatctccactggtccttacgtaatttgaaagcatctatgactagaggc
ctcaatcccaaacaagattattgctgtatttgtttgcaacagtacaagagaaggcaacag
actggtgaccaaattgtagtattcagttgtggccatttgtaccattctctttgtctgcta
agtaaagagtgtggcactgaaacaacaggacagatgaggtggacttgctttaaatgcagt
gcaagtcataaaggagagaaagtaagtttgacttccttggagatgaagaaaagaactccg
gtatcacttgctcagactagttcagagtgtctgttggatcctcagcaagctcaagctttt
gaccagctctgtcgtctatatcgtggaacatcaaggttggcacttttgactgaattgtct
cgagatcatggtggtgaaaaacatggttttgtccaagtctcccaggggtcttctgctctg
aatagtgtcttccaaaatgagacttttcagcttcacctcaatcctcctcctcttctagaa
gactaa
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integrated database retrieval system
