Ahaetulla prasina (Asian vine snake): 131200611
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Entry
131200611 CDS
T09329
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
131200611 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apri03021
]
131200611 (TAF5)
03036 Chromosome and associated proteins [BR:
apri03036
]
131200611 (TAF5)
Transcription machinery [BR:
apri03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
131200611 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
131200611 (TAF5)
Chromosome and associated proteins [BR:
apri03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
131200611 (TAF5)
STAGA complex
131200611 (TAF5)
TFTC complex
131200611 (TAF5)
SAGA complex
131200611 (TAF5)
SLIK complex
131200611 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_Nup120_160
WD_LRWD1
Beta-prop_SPT8
eIF2A
CDK5RAP3
VPS8_N
Beta-prop_WDR35_TULP_N
RAB3GAP2_N
Motif
Other DBs
NCBI-GeneID:
131200611
NCBI-ProteinID:
XP_058043635
LinkDB
All DBs
Position
6:complement(58633303..58650398)
Genome browser
AA seq
799 aa
AA seq
DB search
MAALPEEPTEAVAVKPDPDAGAPPPAPLSQSPISTAAAVATTVPPASASSVAANLLTDGE
PLAGGVDSKSSGTSSPTPPASQLPIHKHTLLAVLQFLRRSNLRESEEILRREARGLVDDV
PSDPNCSTPGVPGAHGGEGQDPSAGILAPGAGDVLINSVTFGQTGATISPAAITTPPAAP
LGHPGKAGVLVEDQPDVSAVLSAYNQQGDPALYEEYYSGLKHFIECALDCHRAELSQLFY
PLFVHMYLELVYNGHENEAKSFFQKFHGDQECYYQDDLRVLSSLTKKEHMRGNETMLDFR
TSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAG
EAKREANKAKVFFGLLKEPEIELPLDDEDEEGENEEGKPKKKKPKKDSMGSKSKKQDPNA
PPQNRIPLPELKDSDKLDKIMNMKEATKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTDD
SSMIVGGFADSTVRVWSVTPKKLRSVKSATDLSVIDKESDDVLERIMDEKTASELKILYG
HSGPVYGASFSPDRNYLLSCSEDGTIRLWSLLTFSCLVGYKGHNYPVWDTQFSPYGYYFV
SGGHDRVSRLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDILNGNC
VRIFTGHKGPVNSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHSDTIYALKFSR
DGEILASGSMDNTVKLWDAVKAFEDLETDDFTTATGHINLPESSQDLLLGTYMTKSTPVL
HLHFTRRNLLLAAGAYSPQ
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggctgctttgccggaggagccgacggaggcagtagcggtaaagccggatcctgatgca
ggagcgcctccgcccgctcctctctcccagtccccgatctcgacggcggcagcagttgca
acaactgtccctcctgcgtctgcctcctcggtcgctgccaaccttctcacagatggggag
ccgcttgcgggaggagttgactcgaagagctcggggacttccagtcccacgccgccagcc
tctcaactacccatccacaagcatactctgctggcggtgctgcagttcttgcgccgcagc
aatctgcgcgaatcggaggagatcctccggagggaagcccgtggtctcgtcgacgacgtc
ccgagcgacccgaattgctcaactcccggggtccccggagctcatggaggggaaggacag
gatcccagtgcggggattttggcccctggagcgggggatgtgctaatcaattctgtcact
tttggccagactggagctacgatctctccagcagctatcacgacacctcccgcagcgccc
ttgggccatcctgggaaagccggagttcttgtagaagatcagccagatgtgagtgcggtg
ctttctgcttataatcaacagggagacccagcactttatgaagaatactacagtggattg
aaacacttcattgaatgtgctctggattgtcatcgagctgaattatcacaacttttttat
cctctatttgtacacatgtacttggaactagtctacaatggacatgaaaacgaagcaaaa
tcgttctttcaaaagtttcacggggaccaggaatgttattaccaagatgacttgcgtgta
ctatccagtttaaccaaaaaagagcatatgaggggcaatgagactatgctggatttccga
acaagcaagtttgtgttgcgtatttcccgtgactcttaccagcttctgaaaagacatctt
caggaaaaacagaacaatcagatctggaacattgttcaagaacatctttacattgatatt
tttgatggaatgcctcgtagtaaacaacagattgatgctatggtgggaagtttagctgga
gaagcaaaacgagaagcaaataaagcaaaggtgttttttggcttattaaaagaaccagaa
attgagttacctttggatgatgaagatgaagagggagagaatgaagagggcaagccaaag
aaaaagaagcccaagaaagatagtatgggatcaaaaagtaaaaagcaggatccaaatgct
ccacctcagaatagaatccctcttcctgagctaaaggattctgataagctggataaaata
atgaatatgaaggaagctactaaacgtgttcggcttggtccagactgtttgccttctatt
tgcttctacacgtttcttaatgcatatcagggtcttacagctgtggatgttacagatgac
tctagcatgatcgttggaggctttgctgattccacagtcagggtatggtctgtgacaccc
aaaaagcttcgcagtgtaaaatcagctacagatctcagtgtcatagataaagaatctgat
gatgttttagaaagaatcatggatgaaaaaacagcaagtgaattgaagattttatatggt
catagtggacctgtctatggtgctagctttagtcctgataggaactatttgctgtcatgt
tcagaggatggcacgatcagattgtggagtcttctaactttttcttgtttggtgggatac
aaaggacataattatcctgtatgggacacacaattctctccatatggatattattttgta
tctggtggccatgacagagtgtctcgtttgtgggctacagatcactatcagcctttgcgg
atctttgctggtcatctggcagatgtcacatgtacacgttttcacccaaactccaactac
attgccacaggctcagcagacagaactgtgaggctttgggatatacttaatggaaactgt
gtaagaatcttcacgggacataagggaccagttaattcattagcattttctcctaatggg
cgattcttggcaactggagcaactgatggaagagtgcttctgtgggatattggccatggt
ttaatggtaggagagctaaaaggacattcagatacaatttatgcgctcaaatttagtaga
gatggagagatcttagcttcaggttcaatggacaatacagttaaactttgggatgctgtg
aaagcttttgaggacttggagacagatgattttacaacagccactggacatataaacctt
cctgaaagttcacaggacttgcttctgggcacatatatgaccaaatcaactccagtttta
cacctccactttactcgaagaaatttacttcttgctgctggggcttatagtcctcagtaa
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integrated database retrieval system
