Ahaetulla prasina (Asian vine snake): 131201255
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Entry
131201255 CDS
T09329
Symbol
DDX21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
apri
Ahaetulla prasina (Asian vine snake)
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
apri03009
]
131201255 (DDX21)
03036 Chromosome and associated proteins [BR:
apri03036
]
131201255 (DDX21)
Enzymes [BR:
apri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131201255 (DDX21)
Ribosome biogenesis [BR:
apri03009
]
Eukaryotic type
Pre-60S particles
Helicases
131201255 (DDX21)
Chromosome and associated proteins [BR:
apri03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
131201255 (DDX21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
131201255
NCBI-ProteinID:
XP_058045038
LinkDB
All DBs
Position
6:20730495..20761017
Genome browser
AA seq
836 aa
AA seq
DB search
MTSKLPSNSVIITRPHLAPVPFWTRRKQPRCQAEAGTGQPSRNSSSSAAALQPQQPGEPP
AAPRGDAAPAAPATRLAGREAASSPACRLPLPLLLPRRPSSFCRAGWAELFPFTPASVSS
SRFCRRLPGKEPQEMPAAPRFESQSEDDLEEPETPMEPDAAPCNGGPKKSKKDKKDKAGK
QKRKKHTLAETELLDLELEPPKAKKIKKKKEMADKNENAISECNSISHMSNGVKHSKKEN
NSGEDSHTECESDQDQELTAEQREGAFANFDISKATLDLLKARGVTYLFPVQVKTFKPVF
EGKDVIAQARTGTGKTFSFAIPLIEKLDRDPQERKRGRSPRVLVLTPTRELAMQVARDFK
DITKKLTVACFYGGTAYNGQLDLIRNGIDILVGTPGRIKDHLQNNKLDISKLRHVVLDEV
DQMLDMGFADQVEEILVNSYKKDSEDNPQTLLFSATCPQWVYNVAKKYMKSKYEQVDLIG
KKTKKTAMTVEHLAIECHWSQRAAVIGDVIQVYSGSHGRTIIFCETKREATELALNASIK
QDAQSLHGDIPQKQREVTLKGFRNGAFEVLVATNVAARGLDIPEVDLVIQNSPPKDVESY
IHRSGRTGRAGRTGVCICFYQRREDYQLKQVEQKAGITFKRIGVPTASDIIKASSKDAIR
SLDSVPPSAIDHFRKSAEQLIEEKGAVEALAAALAHISGATSIEQRSLLNSEAGYVTMIL
QCSVEMHATGYAWRGLKEQLGEDIDNKISRMCFLKGKMGVCFDIPKVELNKIKETWQDTR
RWQLSVATELPELENSPREGGRNPGSEFRNGRRNGGFNRPDRFRNRGQKRSYNQAF
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaagctcccttccaactctgttattattacccgcccacacctagcccccgtc
cccttctggacgcggcgaaagcagccccgctgccaggcagaggcagggacggggcagccc
tcccgtaatagcagcagcagcgccgcggctctccagcctcagcaaccaggagagcccccg
gctgctccgcggggtgacgccgcacctgcagccccggcgacgcgcttagcgggccgcgag
gcggcttcctccccggcctgccgtctcccgctgccgctcctcctcccgcgccgcccctct
tccttctgcagggccggctgggcggagctctttcctttcacgccggcctcggtgtcgagt
agccgcttctgccgtcgcctccccggcaaagagccccaggaaatgcccgcggccccccgc
ttcgagtcccagagcgaagacgacctggaggagcccgagacccccatggagcccgacgcc
gctccgtgcaacggcggccctaaaaagagcaagaaggataaaaaagataaagcaggaaag
cagaaacggaaaaagcatacattagccgagactgaattactggatttggagttggagcca
ccaaaagcaaagaaaattaaaaaaaagaaagaaatggctgataaaaatgaaaatgcaatt
tcagaatgcaattcaatatctcacatgagtaatggggtaaagcattcaaaaaaggagaat
aattctggtgaagattcacatacagaatgtgaaagtgatcaagatcaggaactaacagca
gaacaaagggaaggtgcttttgccaattttgatatctctaaagcaacccttgatcttctg
aaagctcgtggtgtcacctacctgtttcccgtacaagtgaagactttcaagccagtattt
gaaggcaaagacgtgattgcccaagctcggacaggaacagggaagacattctcctttgcc
attccattaattgaaaaacttgatagagatccacaggaaagaaaaagaggccgttcacca
agggtactagttctaactccaaccagagaattggcaatgcaagttgccagagacttcaaa
gatattacaaagaaacttaccgtggcttgtttttatggaggaacagcgtataatggacag
ttggatctaattagaaatggcattgacatcctggttgggactcctggtcgaataaaagat
cacctccagaataataaattggacatttctaaattgagacatgtcgtcttggatgaagtt
gatcagatgttggatatgggatttgctgatcaagtagaagaaatcttagtgaattcttac
aagaaagattctgaagataatccacagacgctcttgttttctgcaacttgccctcagtgg
gtttacaatgtagcaaagaaatatatgaaatccaaatatgagcaagttgatcttattgga
aagaagactaaaaaaactgctatgactgtagagcatttagccatcgaatgtcattggtcc
caaagagctgcagtgattggagatgtcattcaagtctacagcgggagtcatggacgaacc
ataatattttgtgagacaaaaagagaagcaactgaactggctcttaatgcctcaataaaa
caggatgcgcaatctttacatggtgatattccacaaaaacaaagagaggtcactttgaaa
ggctttcgtaatggagcgtttgaagtactggttgcaactaatgtggctgcccgtggctta
gatattccagaagttgatctggtaatacagaattccccaccaaaggacgtagagtcttac
attcatcgctctggacgcacaggacgagctggacggacgggggtctgtatctgtttctat
cagcgcagggaagattatcagctgaagcaagtagaacaaaaagcgggcattacatttaaa
cgtataggtgttcctacagcatcagacataattaaagcttccagtaaagatgcaatcaga
tctttggattctgttcctccatctgccattgaccacttcagaaaatctgctgaacagcta
atagaagaaaagggggccgtggaagctctggctgcagccctggctcacatctcaggagct
acatctattgaacagcgctctttgctcaactctgaggcgggttatgtgaccatgatactt
cagtgctcggtagaaatgcatgccactggttatgcttggcggggtctgaaagaacagttg
ggtgaggacatagacaacaaaatatccagaatgtgttttctcaaaggaaaaatgggcgta
tgttttgatattccaaaagttgaattaaataaaataaaggaaacatggcaagatacaaga
cgctggcaactttctgtagcaacagaattgcctgagcttgaaaattcaccacgtgaggga
ggccgaaatccaggctcagaattcaggaatggaagacgaaacggtggtttcaacaggcct
gaccgattcagaaacaggggccaaaaacggagctataaccaagctttttga
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