KEGG   Ahaetulla prasina (Asian vine snake): 131201377
Entry
131201377         CDS       T09329                                 
Symbol
POLR2D
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
apri  Ahaetulla prasina (Asian vine snake)
Pathway
apri03020  RNA polymerase
apri03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:apri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    131201377 (POLR2D)
  09124 Replication and repair
   03420 Nucleotide excision repair
    131201377 (POLR2D)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:apri03021]
    131201377 (POLR2D)
   03400 DNA repair and recombination proteins [BR:apri03400]
    131201377 (POLR2D)
Transcription machinery [BR:apri03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     131201377 (POLR2D)
DNA repair and recombination proteins [BR:apri03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      131201377 (POLR2D)
SSDB
Motif
Pfam: RNA_pol_Rpb4 RPN11_C Maelstrom Tfb4
Other DBs
NCBI-GeneID: 131201377
NCBI-ProteinID: XP_058045197
LinkDB
Position
6:64402186..64408093
AA seq 142 aa
MAVGGTDIRAVDVEEDASQLVFPKEFETAETLLNSEVHMLLEHRKQQNESVEDEQELSEL
FMKTLNYTGRFSRFKNRETIASVRSLLLQKKLHKFELACLANLGPETAEEAKALIPSLEG
RFEDEELQQILDDIQTKRSFQY
NT seq 429 nt   +upstreamnt  +downstreamnt
atggcggtaggaggtactgacatccgcgccgtagacgtggaagaggatgcatctcagctt
gtgtttcccaaggaatttgaaactgctgaaactcttttaaattcggaagtgcacatgctt
ctggaacatcggaaacagcagaatgagagtgtagaagatgagcaagaactttctgaactg
tttatgaaaacgttaaattatacaggtcgcttcagccgcttcaaaaatcgagagacaatt
gctagtgtccgcagcttattgcttcagaagaaactccataaatttgaactagcatgttta
gctaatctgggtcctgaaacagctgaagaggccaaagctttaattcccagcttagagggt
cggtttgaagatgaagagctgcaacaaattcttgatgacatacagaccaaacgaagcttt
caatattaa

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