Ahaetulla prasina (Asian vine snake): 131201465
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Entry
131201465 CDS
T09329
Symbol
SHOC2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
131201465 (SHOC2)
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Motif
Pfam:
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_9
LRR_At5g56370
LRR_5
LRR_EndoS
DUF8143
Motif
Other DBs
NCBI-GeneID:
131201465
NCBI-ProteinID:
XP_058045390
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Position
6:complement(54219688..54300103)
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AA seq
582 aa
AA seq
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MSSSLGKEKDCKEKDPKVSSAKEREKEAKASGGFGKESKDRESKTKGKEAKDGKKDSSSS
QPGVAFSVDNTIKRPNPAPGARKKSSNAEVIKELNKCREENSVRLDLAKRSIHLLPSSIK
ELTQLTELYLYGNKLQSLPAEVGCLVNLETLALSENSLTSLPDSLGNLKQLRMVDLRHNK
LREIPPVVYRLTSLTTLYLRFNRITSVEKDIKNLSNLTMLSIRENKIKQLPAEIGELCNL
ITLDVAHNQLEHLPKEIGNCTQITKLDLQHNELLDLPDTIGNLSTLKSLGLRYNRLSAIP
RTLAQCSKLDELNLENNIISTLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYAL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLNKIPED
VSGLVSLEVLVLSNNLLRNLPHGIGNLRKLRELDLEENKLELLPNEIAYLRDLQRLILTN
NQLSTLPRGIGHLINLTHLGLGENFLTQLPEEIGTLENLEELYLNDNPHLNSLPFELALC
SKLSIMSIENCPLSTLPAQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtagtcttggaaaagaaaaagattgtaaggagaaagatcccaaagtgtcttca
gcaaaagaaagggagaaagaggccaaggcctctggtggatttgggaaagaaagtaaagac
agagaatctaagaccaaagggaaggaagccaaagatgggaagaaggactctagtagttca
cagccaggtgtggctttttcagttgacaacacaataaaacggcccaacccagctccaggt
gcccgtaaaaaatccagtaatgctgaggtgatcaaagagctaaacaaatgtcgggaagaa
aattcagtacgtttggacttggctaagaggtctatacatcttctcccatcatctatcaaa
gagttaacccagttgacggaactttatttatatggaaataaattacagtcactacctgct
gaggtaggctgtcttgtgaatctggaaactttggccttaagtgagaactcactcaccagc
cttccggactctcttggtaacttgaaacagcttcgtatggttgatctacggcataacaaa
ttaagagagattcctcctgtggtgtataggctaacttcccttactacactttatctgcgg
tttaatcgtatcacttcagtggaaaaggatatcaagaacttgtccaatctcaccatgcta
agcatacgggagaacaaaatcaaacaactccctgcagaaattggtgaattatgtaacctc
ataacgctggatgtagcccacaatcagcttgaacatcttccaaaggagattggcaattgc
acacagatcaccaaacttgatctacagcacaatgaacttttggatcttccagacactata
ggaaatctatctactttgaaaagccttggtctgagatataaccgtctttcagcaataccc
aggactctagcacagtgcagtaaacttgatgagttaaatttggaaaataatattatttct
actttgccagagggtctcttatccagtcttgtgaatttgactagtctaactctggcaagg
aactgttttcaatcttaccctgtgggtggcccttcacagttctctactatctacgctctc
aatatggaacataaccgcattaacaaaattccttttggaattttttcaagagcaaaagta
ttaagtaaactgaacatgaaggacaatcaactgacatcacttcccctggattttgggaca
tggaccagtatggtggaactcaatttagctacaaatcagctcaacaaaattcctgaggat
gtatctggacttgtttctcttgaggttcttgttttgtcaaataatctcctaagaaacctc
ccacatggcattggaaatttgaggaaactgagagaattggatctagaggaaaataaattg
gaattgttgccaaatgaaatagcataccttagggatctacagaggctgatcctaacaaat
aatcaattgagcactcttcctagaggaattggtcaccttatcaatctgacacatcttggg
ctgggagaaaactttcttacacaacttcctgaggaaattggtacactggagaatctggaa
gaactttatctaaatgacaacccacatctaaacagccttccttttgaactggctctttgc
agcaaactatctataatgagcattgagaactgtccgctcagtacccttccagctcagatt
gttgcaggtggaccttcctttattatccagtttctcaaaatgcaaggaccatatcgagcc
atggtctga
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