Ahaetulla prasina (Asian vine snake): 131201836
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Entry
131201836 CDS
T09329
Symbol
CNOT4
Name
(RefSeq) CCR4-NOT transcription complex subunit 4 isoform X1
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131201836 (CNOT4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
apri03000
]
131201836 (CNOT4)
03019 Messenger RNA biogenesis [BR:
apri03019
]
131201836 (CNOT4)
04121 Ubiquitin system [BR:
apri04121
]
131201836 (CNOT4)
Enzymes [BR:
apri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131201836 (CNOT4)
Transcription factors [BR:
apri03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
131201836 (CNOT4)
Messenger RNA biogenesis [BR:
apri03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131201836 (CNOT4)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
131201836 (CNOT4)
Ubiquitin system [BR:
apri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131201836 (CNOT4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-C3HC4_3
zf-UDP
zf-C3HC4_2
zf-RING_2
Torus
Rtf2
DZR_2
Nup35_RRM_2
zf-CCCH_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
131201836
NCBI-ProteinID:
XP_058046099
LinkDB
All DBs
Position
7:62860580..62959791
Genome browser
AA seq
765 aa
AA seq
DB search
MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
PEDPAVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRL
ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV
VDGRTLKASLGTTKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
LQELYKLNPNFLQLSTGVVDKNKNKVTSLQRYDVPNSNNKDAWPSLQSSSKSVNGLTMEH
RKTPPILENGTDPEHMTPDGPDSDFGSIDKPSDSLSIGNCDNLQQISNSDTPSPPPGLSK
SNSVIPINSSNHSARSPFEGAITESQSLFSDNFRHPNPIPSGLPPFPSSPQTSSDWPMAP
EPQSLFTSETIPVSSSTDWQAAFGFGSSKQQEDDLGFDPFDITRKALADLIEKELSVQDQ
PSLSPTSLQNPSSHTTTAKGSGSGFLHPATPANANSLNSTFSVLPQRFPQFQQHRAVYNS
FSFPGQATRYPWVAFPRNNIMHLNHTANPSSNSNFLDLNLPPQHSTGLGGIPIADNNSSV
ESLNMKEWQDGLRALLPNININFGGLPNATSPSNANHSVPTSNTATTDSLNWDSPGSWMD
PAIITGIPASTGNSLDSLQDDNPPHWLKSLQALTEMDGPSAAPTQTPHSNPFSTQIPLHR
ASWNPYSPPSNPASFHSPPPGFQTAFRPPSKPPTDLLQSSALDRH
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcagcccagatgcaaaggaagaccctgtcgaatgccccctttgcatggagcct
ctggagattgatgacataaacttcttcccttgcacctgtggttaccagatctgtcgcttc
tgttggcatcgtattcgcacagatgagaatggactttgtcctgcttgtagaaagccatat
ccagaagatccagcagtatacaaaccactctcccaagaagagctgcagaggataaaaaac
gaaaagaagcagaaacaaaatgagagaaaacagaagatatcagagaatcgtaaacatctg
gccagtgtacgggttgtacaaaagaatcttgtttttgtagttggtttatcccaacgtcta
gcagatccagaggttttgaaaaggccagaatattttggaaaatttggtaaaatacacaaa
gttgtcatcaataacagcacatcatacgcaggctcacagggtccaagtgcaagtgcatat
gtaacatatatccggtcagaagatgcactcagagctatacaatgcgttaataatgtggta
gtagatggaagaacacttaaggcatctttaggaaccacaaagtactgcagttattttctg
aagaacatgcagtgtccaaagccagactgcatgtacctacatgaattaggcgatgaagca
gccagtttcacaaaagaagaaatgcaggctggcaagcatcaagaatatgaacagaagtta
ctccaagaactatacaaattaaaccccaactttctccagttgtccacaggtgtagttgac
aagaacaaaaacaaagtgacttctctacagaggtatgatgtacccaacagtaataacaaa
gatgcctggccatcattacagagttcaagtaaatcagtcaacggcttaacaatggaacac
aggaaaacgcctcctattttagaaaatggcacagacccagaacacatgactccagatggt
ccagattcagatttcggctctattgacaagccatcagattctctcagtataggaaattgt
gacaacttacaacagatatcaaatagtgacacaccatcaccacctcctggtttatcaaaa
tccaattcagtcatcccaatcaattcatccaatcacagtgcacgttctccatttgaagga
gctataacagagtcacagtccctcttctcagacaactttcggcatcccaacccaattcca
agtggactccccccgtttcccagctcgccacagacgtccagtgactggcccatggcacca
gagccacagagtctcttcacatcagaaaccatcccagtatcctcctctacagactggcag
gcagcatttggatttggttcatctaaacagcaagaagatgacttgggatttgatcccttt
gatatcacccgcaaagccttagcagacctgattgagaaggaactgtcagttcaagatcaa
ccatctctctcaccaacatctcttcagaatccttcctcacacactacaactgccaaaggg
tcaggatctggatttctgcatcctgctacacccgcaaatgccaattctctcaatagcaca
ttttctgtcttgccacagaggttcccacaatttcaacagcatcgagcagtttataattcc
ttcagttttccaggccaagcaactcgctatccttgggtggcctttcctcgcaataacatc
atgcacttgaaccacacagcaaatccctcttcaaatagtaatttcttggacttaaatctc
ccacctcaacacagcacaggtctaggagggattcccatagcagacaacaacagttctgta
gagagtttaaatatgaaggaatggcaggacgggctaagggcacttctaccgaacattaac
atcaactttggtggactgcccaatgctacttccccctccaacgccaaccacagtgtacca
acgtccaacactgccacaaccgacagcctgaattgggacagccctgggagctggatggac
cccgcaatcatcacaggtatcccagcctccactggaaacagtttagactctcttcaagac
gacaatccgccgcattggctaaagtctcttcaggctctcacagagatggatggccccagt
gctgccccaacacagaccccccacagtaaccccttcagtacacaaattccattgcacaga
gccagttggaacccctattcccctccttcaaaccctgccagtttccactctcctccccca
ggctttcagacagctttcagaccccccagtaaaccccccacagatttactacagagctca
gcgttggatcgtcattag
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